RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "blastn", bioproject = "PRJNA643700" and tax_phylum = "Acidobacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Acidobacteriota · 4 ✖

tax_kingdom 1

bioproject 1

  • PRJNA643700 · 4 ✖

analysis 1

  • blastn · 4 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
8271512 8271512 PRJNA643700_P_NODE_383587_length_170_cov_1.669421_g382031_i0 PRJNA643700 383587 170 1.669421 2.8380157 uncultured Acidobacteriota bacterium 171953 Bacteria Bacteria 252 1.31e-62   NTclustered gi|2874254027|emb|OY970352.1| 171953 g382031 i0 93.491 131.911764705882 169 11 99 0 2 170 2367434 2367602 MAG: uncultured Acidobacteriota bacterium isolate MFD01916.bin.c.5 genome assembly, chromosome: 1 blastn 22425 252 1 Bacteria   Pseudomonadati Acidobacteriota         uncultured Acidobacteriota bacterium
19745059 19745059 PRJNA643700_P_NODE_358576_length_181_cov_1.969697_g357020_i0 PRJNA643700 358576 181 1.969697 3.56515157 Acidobacteriota bacterium 1978231 Bacteria Bacteria 178 2.43e-40   NTclustered gi|1958098837|gb|CP065005.1| 1978231 g357020 i0 88 73.9116022099447 150 18 83 0 31 180 4649675 4649824 Acidobacteria bacterium isolate Kalu_18-Q3-R12-55_MAXAC.198_cln chromosome, complete genome blastn 13378 178 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
24844482 24844482 PRJNA643700_P_NODE_283300_length_219_cov_1.223529_g281744_i0 PRJNA643700 283300 219 1.223529 2.67952851 Acidobacteriota bacterium 1978231 Bacteria Bacteria 193 1.09e-44   NTclustered gi|1958085512|gb|CP065000.1| 1978231 g281744 i0 84.896 18.3926940639269 192 28 87 1 16 206 3298496 3298305 Acidobacteria bacterium isolate Kalu_18-Q3-R12-55_MAXAC.078_cln chromosome, complete genome blastn 4028 193 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
25385139 25385139 PRJNA643700_P_NODE_410120_length_165_cov_0.896552_g408564_i0 PRJNA643700 410120 165 0.896552 1.4793108 Cyanobacteriota/Melainabacteria group 1798711 Bacteria Bacteria 272 9.73e-69   NTclustered gi|1958085512|gb|CP065000.1| 1978231 g408564 i0 96.364 133.424242424242 165 6 100 0 1 165 3299237 3299073 Acidobacteria bacterium isolate Kalu_18-Q3-R12-55_MAXAC.078_cln chromosome, complete genome blastn 22015 272 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;