RNAquarium Metadata Server
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contig_metadata

8 rows where analysis = "blastn", bioproject = "PRJNA643700" and tax_kingdom = "Orthornavirae"

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tax_superkingdom 1

tax_kingdom 1

  • Orthornavirae · 8 ✖

bioproject 1

  • PRJNA643700 · 8 ✖

analysis 1

  • blastn · 8 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
7536600 7536600 PRJNA643700_P_NODE_377526_length_173_cov_1.241935_g375970_i0 PRJNA643700 377526 173 1.241935 2.14854755 Orthornavirae 2732396 Viruses Viruses 71.3 4.01e-8   NTclustered gi|2183423903|gb|MZ679790.1| 2027243 g375970 i0 100 7.77456647398844 38 0 22 0 1 38 3197 3160 MAG: Leviviridae sp. isolate R28-k141_67620 genomic sequence blastn 1345 71.3 1 Viruses   Orthornavirae Lenarviricota Leviviricetes Norzivirales Fiersviridae   Leviviridae sp.
9546631 9546631 PRJNA643700_P_NODE_121148_length_376_cov_1.746177_g119593_i0 PRJNA643700 121148 376 1.746177 6.56562552 Sanya phasmavirus 2 2905469 Viruses Viruses 52.8 0.036   NTclustered gi|2170811284|gb|MZ209825.1| 2905469 g119593 i0 100 0.074468085106383 28 0 7 0 300 327 5336 5363 MAG: Sanya phasmavirus 2 isolate DFSLS78761, complete genome blastn 28 52.8 1 Viruses   Orthornavirae Negarnaviricota Bunyaviricetes Elliovirales Phasmaviridae   Sanya phasmavirus 2
10822448 10822448 PRJNA643700_P_NODE_362269_length_180_cov_1.022901_g360713_i0 PRJNA643700 362269 180 1.022901 1.8412218 Plasmopara viticola lesion associated narnavirus 9 2719534 Viruses Viruses 215 1.84e-51   NTclustered gi|1826553997|gb|MN539826.1| 2719534 g360713 i0 89.017 7.45555555555556 173 19 96 0 8 180 2227 2055 Plasmopara viticola lesion associated narnavirus 9 isolate DMG-A_DN37704 RNA-dependent RNA polymerase gene, complete cds blastn 1342 215 1 Viruses   Orthornavirae Lenarviricota Amabiliviricetes Wolframvirales Narnaviridae Narnavirus Plasmopara viticola lesion associated narnavirus 9
15921051 15921051 PRJNA643700_P_NODE_340833_length_190_cov_0.950355_g339277_i0 PRJNA643700 340833 190 0.950355 1.8056745 Betacoronavirus pandemicum 3418604 Viruses Viruses 56.5 0.001   NTclustered gi|2155033579|emb|OV039277.1| 2697049 g339277 i0 100 0.157894736842105 30 0 16 0 161 190 30513 30542 Severe acute respiratory syndrome coronavirus 2 isolate 165 genome assembly, chromosome: 165 blastn 30 56.5 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Nidovirales Coronaviridae Betacoronavirus Betacoronavirus pandemicum
15921112 15921112 PRJNA643700_P_NODE_397973_length_167_cov_0.881356_g396417_i0 PRJNA643700 397973 167 0.881356 1.47186452 Botourmiaviridae sp. 2808997 Viruses Viruses 117 4.900000000000001e-22   NTclustered gi|2396039588|gb|ON812873.1| 2808997 g396417 i0 80.368 0.976047904191617 163 24 95 7 1 159 1260 1102 MAG: Botourmiaviridae sp. isolate TIGMIC_5, complete genome blastn 163 117 1 Viruses   Orthornavirae Lenarviricota Miaviricetes Ourlivirales Botourmiaviridae   Botourmiaviridae sp.
16461488 16461488 PRJNA643700_P_NODE_380573_length_171_cov_2.229508_g379017_i0 PRJNA643700 380573 171 2.229508 3.81245868 Orthornavirae 2732396 Viruses Viruses 69.4 1.42e-7   NTclustered gi|2183423903|gb|MZ679790.1| 2027243 g379017 i0 97.5 7.89473684210526 40 1 23 0 132 171 3167 3206 MAG: Leviviridae sp. isolate R28-k141_67620 genomic sequence blastn 1350 69.4 1 Viruses   Orthornavirae Lenarviricota Leviviricetes Norzivirales Fiersviridae   Leviviridae sp.
22295408 22295408 PRJNA643700_P_NODE_432198_length_152_cov_2.019417_g430642_i0 PRJNA643700 432198 152 2.019417 3.06951384 Vormycovirus duerysiphe 3433293 Viruses Viruses 76.8 7.37e-10   NTclustered gi|2262714028|gb|OM363732.1| 2949725 g430642 i0 87.692 0.427631578947368 65 8 43 0 48 112 381 445 Erysiphe lesion-associated ormycovirus 3 isolate PMGA hypothetical protein (ORF2) gene, complete cds blastn 65 76.8 1 Viruses   Orthornavirae   Orpoviricetes Formycovirales Betaormycoviridae Vormycovirus Vormycovirus duerysiphe
24844358 24844358 PRJNA643700_P_NODE_103600_length_409_cov_3.388889_g102046_i0 PRJNA643700 103600 409 3.388889 13.86055601 Rotavirus alphagastroenteritidis 3432193 Viruses Viruses 54.7 0.011   NTclustered gi|2904589818|gb|PQ724848.1| 28875 g102046 i0 96.97 0.0806845965770171 33 0 8 1 41 72 1026 1058 Rotavirus A isolate RVA/Rat/China/LH1221/2022/G3P[10] VP1 gene, partial cds blastn 33 54.7 1 Viruses   Orthornavirae Duplornaviricota Resentoviricetes Reovirales Sedoreoviridae Rotavirus Rotavirus alphagastroenteritidis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;