contig_metadata
12 rows where analysis = "blastn", bioproject = "PRJNA643700" and tax_kingdom = "Fusobacteriati"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 618224 | 618224 | PRJNA643700_P_NODE_391121_length_168_cov_1.630252_g389565_i0 | PRJNA643700 | 391121 | 168 | 1.630252 | 2.73882336 | Sneathia vaginalis | 187101 | Bacteria | Bacteria | 52.8 | 0.014 | NTclustered | gi|2769795739|gb|CP160094.1| | 187101 | g389565 | i0 | 100 | 0.166666666666667 | 28 | 0 | 17 | 0 | 108 | 135 | 881826 | 881853 | Sneathia vaginalis strain CCUG_64370 chromosome, complete genome | blastn | 28 | 52.8 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Leptotrichiaceae | Sneathia | Sneathia vaginalis | ||
| 3710378 | 3710378 | PRJNA643700_P_NODE_118723_length_380_cov_2.280967_g117168_i0 | PRJNA643700 | 118723 | 380 | 2.280967 | 8.6676746 | Leptotrichia | 32067 | Bacteria | Bacteria | 56.5 | 0.003 | NTclustered | gi|1708579770|dbj|AP019840.1| | 109328 | g117168 | i0 | 92.5 | 0.292105263157895 | 40 | 1 | 11 | 2 | 19 | 58 | 1541366 | 1541329 | Leptotrichia trevisanii JMUB3935 DNA, complete genome | blastn | 111 | 56.5 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Leptotrichiaceae | Leptotrichia | Leptotrichia trevisanii | ||
| 4445782 | 4445782 | PRJNA643700_P_NODE_225164_length_257_cov_2.250000_g223608_i0 | PRJNA643700 | 225164 | 257 | 2.25 | 5.7825 | Leptotrichia mesophila | 3239303 | Bacteria | Bacteria | 54.7 | 0.006 | NTclustered | gi|2785242249|gb|CP165646.1| | 3239303 | g223608 | i0 | 100 | 0.11284046692607 | 29 | 0 | 11 | 0 | 9 | 37 | 1003522 | 1003494 | Leptotrichia sp. HSP-342 chromosome, complete genome | blastn | 29 | 54.7 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Leptotrichiaceae | Leptotrichia | Leptotrichia mesophila | ||
| 4445869 | 4445869 | PRJNA643700_P_NODE_334984_length_192_cov_1.944056_g333428_i0 | PRJNA643700 | 334984 | 192 | 1.944056 | 3.73258752 | uncultured Ilyobacter sp. | 544433 | Bacteria | Bacteria | 58.4 | 3.55e-4 | NTclustered | gi|2621703980|emb|OY762935.1| | 544433 | g333428 | i0 | 100 | 0.161458333333333 | 31 | 0 | 16 | 0 | 150 | 180 | 1385499 | 1385529 | MAG: uncultured Ilyobacter sp. isolate b034904b-4944-4ecc-b743-47c946c9bc96 genome assembly, chromosome: 1 | blastn | 31 | 58.4 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Ilyobacter | uncultured Ilyobacter sp. | ||
| 4986985 | 4986985 | PRJNA643700_P_NODE_290184_length_215_cov_1.397590_g288628_i0 | PRJNA643700 | 290184 | 215 | 1.39759 | 3.0048185 | Fusobacterium | 848 | Bacteria | Bacteria | 54.7 | 0.005 | NTclustered | gi|2704977725|gb|CP077125.1| | 851 | g288628 | i0 | 100 | 1.48372093023256 | 29 | 0 | 13 | 0 | 60 | 88 | 1865551 | 1865523 | Fusobacterium nucleatum strain KCOM3714 chromosome, complete genome | blastn | 319 | 54.7 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Fusobacterium | Fusobacterium nucleatum | ||
| 16461558 | 16461558 | PRJNA643700_P_NODE_8073_length_1170_cov_9.732382_g7464_i0 | PRJNA643700 | 8073 | 1170 | 9.732382 | 113.8688694 | Cetobacterium | 180162 | Bacteria | Bacteria | 2017 | 0 | NTclustered | gi|2865368125|gb|CP122294.1| | 188913 | g7464 | i0 | 97.949 | 532.423076923077 | 1170 | 13 | 100 | 5 | 1 | 1170 | 278673 | 279831 | Cetobacterium somerae strain MSU41 plasmid p41_t2, complete sequence | blastn | 622935 | 2017 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Cetobacterium | Cetobacterium somerae | ||
| 18470376 | 18470376 | PRJNA643700_P_NODE_252575_length_238_cov_1.100529_g251019_i0 | PRJNA643700 | 252575 | 238 | 1.100529 | 2.61925902 | Leptotrichia sp. oral taxon 847 | 1785996 | Bacteria | Bacteria | 54.7 | 0.006 | NTclustered | gi|987458696|gb|CP014231.1| | 1785996 | g251019 | i0 | 100 | 0.121848739495798 | 29 | 0 | 12 | 0 | 150 | 178 | 417690 | 417718 | Leptotrichia sp. oral taxon 847 strain F0260 chromosome, complete genome | blastn | 29 | 54.7 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Leptotrichiaceae | Leptotrichia | Leptotrichia sp. oral taxon 847 | ||
| 21020609 | 21020609 | PRJNA643700_P_NODE_364737_length_178_cov_2.782946_g363181_i0 | PRJNA643700 | 364737 | 178 | 2.782946 | 4.9536438800000004 | Cetobacterium somerae | 188913 | Bacteria | Bacteria | 318 | 1.34e-82 | NTclustered | gi|2850954511|gb|CP173065.1| | 1319815 | g363181 | i0 | 98.876 | 501.76404494382 | 178 | 2 | 100 | 0 | 1 | 178 | 941317 | 941140 | Cetobacterium somerae ATCC BAA-474 chromosome | blastn | 89314 | 318 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Cetobacterium | Cetobacterium somerae | ||
| 22295419 | 22295419 | PRJNA643700_P_NODE_62358_length_528_cov_9.123173_g60842_i0 | PRJNA643700 | 62358 | 528 | 9.123173 | 48.17035344 | Cetobacterium somerae | 188913 | Bacteria | Bacteria | 929 | 0 | NTclustered | gi|2666488225|gb|CP143319.1| | 188913 | g60842 | i0 | 98.485 | 525.426136363636 | 528 | 7 | 100 | 1 | 1 | 528 | 1318442 | 1318968 | Cetobacterium somerae strain ceto chromosome, complete genome | blastn | 277425 | 929 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Cetobacterium | Cetobacterium somerae | ||
| 22836095 | 22836095 | PRJNA643700_P_NODE_273678_length_224_cov_2.491429_g272122_i0 | PRJNA643700 | 273678 | 224 | 2.491429 | 5.58080096 | Fusobacterium | 848 | Bacteria | Bacteria | 52.8 | 0.02 | NTclustered | gi|1208657894|gb|CP021934.1| | 76857 | g272122 | i0 | 96.875 | 1.85714285714286 | 32 | 0 | 14 | 1 | 28 | 58 | 23022 | 23053 | Fusobacterium nucleatum subsp. polymorphum strain KCOM 1260 (=ChDC F218) genome | blastn | 416 | 52.8 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Fusobacterium | Fusobacterium polymorphum | ||
| 23570775 | 23570775 | PRJNA643700_P_NODE_151439_length_331_cov_1.436170_g149884_i0 | PRJNA643700 | 151439 | 331 | 1.43617 | 4.7537227 | Leptotrichia rugosa | 3239302 | Bacteria | Bacteria | 52.8 | 0.031 | NTclustered | gi|2785246835|gb|CP165644.1| | 3239302 | g149884 | i0 | 94.286 | 0.105740181268882 | 35 | 0 | 10 | 2 | 135 | 168 | 1626629 | 1626596 | Leptotrichia sp. HSP-334 chromosome, complete genome | blastn | 35 | 52.8 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Leptotrichiaceae | Leptotrichia | Leptotrichia rugosa | ||
| 24110657 | 24110657 | PRJNA643700_P_NODE_83899_length_457_cov_2.039216_g82351_i0 | PRJNA643700 | 83899 | 457 | 2.039216 | 9.31921712 | Fusobacterium | 848 | Bacteria | Bacteria | 52.8 | 0.044 | NTclustered | gi|2706424020|gb|CP077136.1| | 76857 | g82351 | i0 | 100 | 0.678336980306346 | 28 | 0 | 6 | 0 | 422 | 449 | 884293 | 884320 | Fusobacterium polymorphum strain KCOM3036 chromosome, complete genome | blastn | 310 | 52.8 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Fusobacterium | Fusobacterium polymorphum |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;