RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

13 rows where analysis = "blastn", bioproject = "PRJNA643700" and tax_kingdom = "Bamfordvirae"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_kingdom 1

  • Bamfordvirae · 13 ✖

bioproject 1

  • PRJNA643700 · 13 ✖

analysis 1

  • blastn · 13 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1158659 1158659 PRJNA643700_P_NODE_29941_length_730_cov_3.362702_g28708_i0 PRJNA643700 29941 730 3.362702 24.5477246 root 1 Root_unresolved Root_unresolved 1343 0   NTclustered gi|1377596870|gb|MF044052.1| 10515 g28708 i0 99.863 100 730 1 100 0 1 730 3098 2369 human adenovirus 2 isolate HK91, complete genome blastn 73000 1349 0.995552260934025 Viruses   Bamfordvirae Preplasmiviricota Pharingeaviricetes Rowavirales Adenoviridae Mastadenovirus Mastadenovirus caesari
1894248 1894248 PRJNA643700_P_NODE_12582_length_1013_cov_2.815353_g11793_i0 PRJNA643700 12582 1013 2.815353 28.51952589 Mimivirus LCMiAC02 2506609 Viruses Viruses 54.7 0.029   NTclustered gi|1588062749|gb|MK500414.1| 2506609 g11793 i0 100 0.0286278381046397 29 0 3 0 766 794 6572 6544 MAG: Mimivirus LCMiAC02 genomic sequence blastn 29 54.7 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Imitervirales Mimiviridae   Mimivirus LCMiAC02
3710375 3710375 PRJNA643700_P_NODE_113903_length_389_cov_1.835294_g112348_i0 PRJNA643700 113903 389 1.835294 7.13929366 root 1 Root_unresolved Root_unresolved 499 1.1e-136   NTclustered gi|2288721861|gb|OP218818.1| 10535 g112348 i0 100 100.712082262211 270 0 100 0 120 389 1228 1497 Unidentified adenovirus strain CHOP Ad5 blastn 39177 499 1 Viruses   Bamfordvirae Preplasmiviricota Pharingeaviricetes Rowavirales Adenoviridae Mastadenovirus unidentified adenovirus
6996718 6996718 PRJNA643700_P_NODE_293086_length_213_cov_2.469512_g291530_i0 PRJNA643700 293086 213 2.469512 5.26006056 Tupanvirus salinum 3060758 Viruses Viruses 52.8 0.019   NTclustered gi|2500358058|ref|NC_075039.1| 2126985 g291530 i0 100 0.131455399061033 28 0 13 0 170 197 1319442 1319469 Tupanvirus soda lake, partial genome blastn 28 52.8 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Imitervirales Mimiviridae Tupanvirus Tupanvirus salinum
9546637 9546637 PRJNA643700_P_NODE_127728_length_365_cov_1.645570_g126173_i0 PRJNA643700 127728 365 1.64557 6.0063305 Hokovirus HKV1 1977638 Viruses Viruses 56.5 0.003   NTclustered gi|1174571934|gb|KY684105.1| 1977638 g126173 i0 100 0.0821917808219178 30 0 8 0 322 351 11883 11854 Hokovirus HKV1 isolate HKV1 clone Hokovirus_3, sequence blastn 30 56.5 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Imitervirales Mimiviridae Hokovirus Hokovirus HKV1
10822315 10822315 PRJNA643700_P_NODE_195829_length_282_cov_2.214592_g194273_i0 PRJNA643700 195829 282 2.214592 6.24514944 Mimiviridae sp. ChoanoV1 2596887 Viruses Viruses 54.7 0.007   NTclustered gi|1717455539|gb|MK250085.1| 2596887 g194273 i0 94.444 0.127659574468085 36 0 12 2 160 193 203113 203078 Mimiviridae sp. ChoanoV1 genomic sequence blastn 36 54.7 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Imitervirales Schizomimiviridae   Mimiviridae sp. ChoanoV1
11362016 11362016 PRJNA643700_P_NODE_19589_length_861_cov_4.636700_g18590_i0 PRJNA643700 19589 861 4.6367 39.921987 root 1 Root_unresolved Root_unresolved 808 0   NTclustered gi|2616465679|gb|OR735196.1| 10515 g18590 i0 99.773 80.8339140534263 441 0 100 1 422 861 3587 4027 Human adenovirus 2 isolate HAdV-C2/USA/11A6/2013, complete genome blastn 69598 808 1 Viruses   Bamfordvirae Preplasmiviricota Pharingeaviricetes Rowavirales Adenoviridae Mastadenovirus Mastadenovirus caesari
11362136 11362136 PRJNA643700_P_NODE_395389_length_167_cov_2.652542_g393833_i0 PRJNA643700 395389 167 2.652542 4.42974514 root 1 Root_unresolved Root_unresolved 309 7.53e-80   NTclustered gi|2288721861|gb|OP218818.1| 10535 g393833 i0 100 100 167 0 100 0 1 167 1716 1882 Unidentified adenovirus strain CHOP Ad5 blastn 16700 309 1 Viruses   Bamfordvirae Preplasmiviricota Pharingeaviricetes Rowavirales Adenoviridae Mastadenovirus unidentified adenovirus
12097604 12097604 PRJNA643700_P_NODE_317890_length_200_cov_4.854305_g316334_i0 PRJNA643700 317890 200 4.854305 9.70861 Tokyovirus A1 1826170 Viruses Viruses 56.5 0.001   NTclustered gi|1018241373|dbj|AP017398.1| 1826170 g316334 i0 100 0.3 30 0 15 0 87 116 117370 117341 Tokyovirus A1 DNA, nearly complete genome blastn 60 56.5 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Pimascovirales Marseilleviridae Marseillevirus Tokyovirus A1
15921080 15921080 PRJNA643700_P_NODE_373593_length_174_cov_2.656000_g372037_i0 PRJNA643700 373593 174 2.656 4.62144 Mastadenovirus caesari 3241411 Viruses Viruses 316 4.7e-82   NTclustered gi|325965614|gb|JF430401.1| 28285 g372037 i0 99.425 96.2528735632184 174 1 100 0 1 174 72 245 Human adenovirus 5 E1B-84R (E1B) gene, complete cds, alternatively spliced blastn 16748 316 1 Viruses   Bamfordvirae Preplasmiviricota Pharingeaviricetes Rowavirales Adenoviridae Mastadenovirus Mastadenovirus caesari
19010159 19010159 PRJNA643700_P_NODE_318295_length_200_cov_2.066225_g316739_i0 PRJNA643700 318295 200 2.066225 4.13245 root 1 Root_unresolved Root_unresolved 370 4.22e-98   NTclustered gi|2288721861|gb|OP218818.1| 10535 g316739 i0 100 100 200 0 100 0 1 200 1897 2096 Unidentified adenovirus strain CHOP Ad5 blastn 20000 370 1 Viruses   Bamfordvirae Preplasmiviricota Pharingeaviricetes Rowavirales Adenoviridae Mastadenovirus unidentified adenovirus
21020549 21020549 PRJNA643700_P_NODE_278197_length_222_cov_1.202312_g276641_i0 PRJNA643700 278197 222 1.202312 2.66913264 Betaentomopoxvirus ahonmai 1993630 Viruses Viruses 52.8 0.02   NTclustered gi|506498026|ref|NC_021247.1| 1293540 g276641 i0 100 0.126126126126126 28 0 13 0 58 85 13454 13427 Adoxophyes honmai enomopoxvirus 'L', complete genome blastn 28 52.8 1 Viruses   Bamfordvirae Nucleocytoviricota Pokkesviricetes Chitovirales Poxviridae Betaentomopoxvirus Betaentomopoxvirus ahonmai
21020731 21020731 PRJNA643700_P_NODE_51397_length_579_cov_2.784906_g49923_i0 PRJNA643700 51397 579 2.784906 16.12460574 Salmonpoxvirus gillpox 3432242 Viruses Viruses 60.2 3.42e-4   NTclustered gi|2812502964|emb|OY730730.1| 1680908 g49923 i0 92.857 0.145077720207254 42 1 7 1 49 90 224311 224272 Salmon gill poxvirus isolate A3 genome assembly, chromosome: 1 blastn 84 60.2 1 Viruses   Bamfordvirae Nucleocytoviricota Pokkesviricetes Chitovirales Poxviridae Salmonpoxvirus Salmonpoxvirus gillpox

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;