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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA642647" and tax_superkingdom = "Archaea"

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tax_superkingdom 1

  • Archaea · 2 ✖

tax_phylum 1

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA642647 · 2 ✖

analysis 1

  • blastn · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
13912553 13912553 PRJNA642647_P_NODE_5571_length_161_cov_1.846774_g5521_i0 PRJNA642647 5571 161 1.846774 2.97330614 Archaea 2157 Archaea Archaea 71.3 3.69e-8   NTclustered gi|765560211|gb|KP308712.1| 115547 g5521 i0 87.097 1.47204968944099 62 8 39 0 81 142 185452 185513 Uncultured archaeon clone gwa2_scaffold_75 genomic sequence blastn 237 71.3 1 Archaea               uncultured archaeon
15920874 15920874 PRJNA642647_P_NODE_673_length_435_cov_95.505025_g624_i0 PRJNA642647 673 435 95.505025 415.44685875 uncultured Methanoregula sp. 1005933 Archaea Archaea 606 7.149999999999998e-169   NTclustered gi|2621785414|emb|OY781872.1| 1005933 g624 i0 93.494 226.489655172414 415 15 94 8 29 435 3117706 3117296 MAG: uncultured Methanoregula sp. isolate a338d9b7-13de-4e9d-8f1a-cfe667c23436 genome assembly, chromosome: 1 blastn 98523 606 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanomicrobiales Methanoregulaceae Methanoregula uncultured Methanoregula sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;