RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA642647" and tax_phylum = "Zoopagomycota"

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tax_superkingdom 1

tax_phylum 1

  • Zoopagomycota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA642647 · 2 ✖

analysis 1

  • blastn · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6996556 6996556 PRJNA642647_P_NODE_4186_length_176_cov_3.546763_g4136_i0 PRJNA642647 4186 176 3.546763 6.2423028800000004 Caudomyces sp. UT-1-W16a 1306362 Fungi Fungi 80.5 6.81e-11   NTclustered gi|469517853|gb|JX155620.1| 1306362 g4136 i0 85.714 29.5625 77 9 43 1 1 75 500 576 Caudomyces sp. UT-1-W16a 18S ribosomal RNA gene, partial sequence blastn 5203 80.5 1 Eukaryota Opisthokonta Fungi Zoopagomycota Harpellomycetes Harpellales Legeriomycetaceae Caudomyces Caudomyces sp. UT-1-W16a
16461340 16461340 PRJNA642647_P_NODE_2073_length_239_cov_2.876238_g2023_i0 PRJNA642647 2073 239 2.876238 6.87420882 Opisthokonta 33154 Fungi Fungi 71.3 5.93e-8   NTclustered gi|2572089157|gb|OR502659.1| 34485 g2023 i0 90.741 15.8117154811715 54 4 23 1 122 175 718 666 Entomophthora muscae strain KVL 14-117 large subunit ribosomal RNA gene, partial sequence blastn 3779 71.3 1 Eukaryota Opisthokonta Fungi Zoopagomycota Entomophthoromycetes Entomophthorales Entomophthoraceae Entomophthora Entomophthora muscae

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;