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contig_metadata

9 rows where analysis = "blastn", bioproject = "PRJNA642647" and tax_phylum = "Rotifera"

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tax_superkingdom 1

tax_phylum 1

  • Rotifera · 9 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA642647 · 9 ✖

analysis 1

  • blastn · 9 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1158547 1158547 PRJNA642647_P_NODE_181_length_844_cov_43.156134_g150_i0 PRJNA642647 181 844 43.156134 364.23777096 Ploima 84394 Rotifera other_Eukaryota 573 1.4699999999999995e-158   NTclustered gi|61200806|gb|AY829084.1| 160652 g150 i0 94.851 47.8471563981043 369 16 65 3 4 369 1363 1731 Brachionus patulus 28S ribosomal RNA gene, partial sequence blastn 40383 575 0.996521739130435 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus patulus
3168836 3168836 PRJNA642647_P_NODE_5403_length_163_cov_2.920635_g5353_i0 PRJNA642647 5403 163 2.920635 4.76063505 Brachionus patulus 160652 Rotifera other_Eukaryota 268 1.24e-67   NTclustered gi|61200806|gb|AY829084.1| 160652 g5353 i0 96.875 77.4049079754601 160 5 98 0 4 163 1142 1301 Brachionus patulus 28S ribosomal RNA gene, partial sequence blastn 12617 268 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus patulus
6996574 6996574 PRJNA642647_P_NODE_586_length_462_cov_13.134118_g537_i0 PRJNA642647 586 462 13.134118 60.67962516 Lepadella patella 231622 Rotifera other_Eukaryota 640 7.529999999999999e-179   NTclustered gi|83285192|gb|DQ297739.1| 231622 g537 i0 91.757 75.8701298701299 461 36 99 2 1 459 747 287 Lepadella patella 28S ribosomal RNA gene, partial sequence blastn 35052 640 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Lepadellidae Lepadella Lepadella patella
13372008 13372008 PRJNA642647_P_NODE_2691_length_211_cov_2.994253_g2641_i0 PRJNA642647 2691 211 2.994253 6.31787383 Habrotrocha elusa 468653 Rotifera other_Eukaryota 379 7.489999999999999e-101   NTclustered gi|2537903795|gb|KM043260.2| 1548227 g2641 i0 99.519 98.5355450236967 208 1 99 0 1 208 849 642 Habrotrocha elusa elusa voucher HB001 18S ribosomal RNA gene, partial sequence blastn 20791 379 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Habrotrochidae Habrotrocha Habrotrocha elusa
17195917 17195917 PRJNA642647_P_NODE_1734_length_263_cov_12.880531_g1684_i0 PRJNA642647 1734 263 12.880531 33.87579653 Epiphanes senta 338913 Rotifera other_Eukaryota 355 1.63e-93   NTclustered gi|72153754|gb|DQ089742.1| 338913 g1684 i0 91.571 53.4334600760456 261 17 98 5 4 261 1841 2099 Epiphanes senta 28S ribosomal RNA gene, partial sequence blastn 14053 355 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Epiphanidae Epiphanes Epiphanes senta
17736459 17736459 PRJNA642647_P_NODE_2554_length_216_cov_3.039106_g2504_i0 PRJNA642647 2554 216 3.039106 6.56446896 Metazoa 33208 Rotifera other_Eukaryota 394 2.75e-105   NTclustered gi|37785582|gb|AY210469.1| 96448 g2504 i0 99.537 90.6435185185185 216 1 100 0 1 216 930 1145 Philodina roseola 28S ribosomal RNA gene, partial sequence blastn 19579 394 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Philodina Philodina roseola
17736471 17736471 PRJNA642647_P_NODE_3854_length_182_cov_11.675862_g3804_i0 PRJNA642647 3854 182 11.675862 21.25006884 Brachionus 10194 Rotifera other_Eukaryota 316 4.97e-82   NTclustered gi|1035550476|gb|KU299741.1| 1858257 g3804 i0 98.87 96.7252747252747 177 2 97 0 2 178 594 418 Brachionus plicatilis complex sp. Esk 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1 and 5.8S ribosomal RNA gene, complete sequence; and internal transcribed spacer 2, partial sequence blastn 17604 316 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus plicatilis complex sp. Esk
22295060 22295060 PRJNA642647_P_NODE_2258_length_228_cov_3.340314_g2208_i0 PRJNA642647 2258 228 3.340314 7.61591592 Adineta vaga 104782 Rotifera other_Eukaryota 383 6.35e-102   NTclustered gi|72153731|gb|DQ089739.1| 104782 g2208 i0 97.333 57.6052631578947 225 6 99 0 4 228 2485 2709 Adineta vaga 28S ribosomal RNA gene, partial sequence blastn 13134 383 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta vaga
24110432 24110432 PRJNA642647_P_NODE_1539_length_280_cov_3.345679_g1489_i0 PRJNA642647 1539 280 3.345679 9.3679012 Metazoa 33208 Rotifera other_Eukaryota 475 1.2899999999999997e-129   NTclustered gi|37785582|gb|AY210469.1| 96448 g1489 i0 99.615 41.025 260 1 93 0 1 260 2174 1915 Philodina roseola 28S ribosomal RNA gene, partial sequence blastn 11487 475 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Philodina Philodina roseola

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;