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contig_metadata

8 rows where analysis = "blastn", bioproject = "PRJNA642647" and tax_phylum = "Gastrotricha"

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tax_superkingdom 1

tax_phylum 1

  • Gastrotricha · 8 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA642647 · 8 ✖

analysis 1

  • blastn · 8 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1894205 1894205 PRJNA642647_P_NODE_3282_length_194_cov_4.038217_g3232_i0 PRJNA642647 3282 194 4.038217 7.83414098 Aspidiophorus tetrachaetus 1194610 Gastrotricha other_Eukaryota 276 9.13e-70   NTclustered gi|389075663|gb|JN185540.1| 1194610 g3232 i0 92.347 100.170103092784 196 11 100 4 1 194 1476 1669 Aspidiophorus tetrachaetus voucher TK99 28S ribosomal RNA gene, partial sequence blastn 19433 276 1 Eukaryota Opisthokonta Metazoa Gastrotricha   Chaetonotida Chaetonotidae Aspidiophorus Aspidiophorus tetrachaetus
10087060 10087060 PRJNA642647_P_NODE_2648_length_213_cov_1.829545_g2598_i0 PRJNA642647 2648 213 1.829545 3.89693085 Chaetonotus 68038 Gastrotricha other_Eukaryota 348 2.13e-91   NTclustered gi|1748014074|gb|MN496276.1| 2614565 g2598 i0 96.262 100.657276995305 214 5 100 2 1 213 1893 2104 Chaetonotus aff. haideri MK-2019 voucher GA_10.18 large subunit ribosomal RNA gene, partial sequence blastn 21440 348 1 Eukaryota Opisthokonta Metazoa Gastrotricha   Chaetonotida Chaetonotidae Chaetonotus Chaetonotus aff. haideri MK-2019
10822218 10822218 PRJNA642647_P_NODE_4129_length_177_cov_3.292857_g4079_i0 PRJNA642647 4129 177 3.292857 5.82835689 Chaetonotus sp. 2 MK-2019 2594615 Gastrotricha other_Eukaryota 255 1.06e-63   NTclustered gi|1701710056|gb|MK310449.1| 2594615 g4079 i0 94.578 51.045197740113 166 7 93 2 1 164 5990 6155 Chaetonotus sp. 2 MK-2019 voucher IC_56.19 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 9035 255 1 Eukaryota Opisthokonta Metazoa Gastrotricha   Chaetonotida Chaetonotidae Chaetonotus Chaetonotus sp. 2 MK-2019
16461354 16461354 PRJNA642647_P_NODE_4413_length_172_cov_10.185185_g4363_i0 PRJNA642647 4413 172 10.185185 17.5185182 Chaetonotus 68038 Gastrotricha other_Eukaryota 287 3.63e-73   NTclustered gi|1418591743|gb|MF325887.1| 2259391 g4363 i0 99.367 90.6046511627907 158 1 92 0 2 159 411 568 Chaetonotus subtilis isolate AMU241.26 18S ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S ribosomal RNA gene, region blastn 15584 287 1 Eukaryota Opisthokonta Metazoa Gastrotricha   Chaetonotida Chaetonotidae Chaetonotus Chaetonotus subtilis
17195940 17195940 PRJNA642647_P_NODE_374_length_575_cov_2.715613_g326_i0 PRJNA642647 374 575 2.715613 15.61477475 Lepidodermella intermedia 1194613 Gastrotricha other_Eukaryota 691 0   NTclustered gi|389075585|gb|JN185514.1| 1194613 g326 i0 88.601 96.0782608695652 579 48 99 9 4 575 1033 466 Lepidodermella intermedia voucher TK126 28S ribosomal RNA gene, partial sequence blastn 55245 691 1 Eukaryota Opisthokonta Metazoa Gastrotricha   Chaetonotida Chaetonotidae Lepidodermella Lepidodermella intermedia
23570707 23570707 PRJNA642647_P_NODE_3339_length_193_cov_2.756410_g3289_i0 PRJNA642647 3339 193 2.75641 5.3198713 Lepidodermella aff. intermedia MK-2020 2797310 Gastrotricha other_Eukaryota 346 6.82e-91   NTclustered gi|1946637706|gb|MW377596.1| 2797310 g3289 i0 99.474 87.1088082901554 190 1 98 0 1 190 217 28 Lepidodermella aff. intermedia MK-2020 internal transcribed spacer 2 and large subunit ribosomal RNA gene, partial sequence. blastn 16812 346 1 Eukaryota Opisthokonta Metazoa Gastrotricha   Chaetonotida Chaetonotidae Lepidodermella Lepidodermella aff. intermedia MK-2020
24844299 24844299 PRJNA642647_P_NODE_2000_length_244_cov_5.130435_g1950_i0 PRJNA642647 2000 244 5.130435 12.5182614 Lepidodermella minus 1194614 Gastrotricha other_Eukaryota 440 4.019999999999999e-119   NTclustered gi|389075429|gb|JN185474.1| 1194615 g1950 i0 99.585 99.25 241 1 99 0 4 244 587 827 Lepidodermella minus minus voucher TK166 18S ribosomal RNA gene, partial sequence blastn 24217 440 1 Eukaryota Opisthokonta Metazoa Gastrotricha   Chaetonotida Chaetonotidae Lepidodermella Lepidodermella minus
24844322 24844322 PRJNA642647_P_NODE_4200_length_176_cov_2.352518_g4150_i0 PRJNA642647 4200 176 2.352518 4.14043168 Lepidodermella minus 1194614 Gastrotricha other_Eukaryota 324 2.85e-84   NTclustered gi|389075429|gb|JN185474.1| 1194615 g4150 i0 100 99.4034090909091 175 0 99 0 1 175 89 263 Lepidodermella minus minus voucher TK166 18S ribosomal RNA gene, partial sequence blastn 17495 324 1 Eukaryota Opisthokonta Metazoa Gastrotricha   Chaetonotida Chaetonotidae Lepidodermella Lepidodermella minus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;