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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA641991" and tax_phylum = "Tubulinea"

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tax_superkingdom 1

tax_phylum 1

  • Tubulinea · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA641991 · 3 ✖

analysis 1

  • blastn · 3 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3168593 3168593 PRJNA641991_P_NODE_2163_length_207_cov_1.607595_g2122_i0 PRJNA641991 2163 207 1.607595 3.32772165 Amoeba proteus 5775 Tubulinea other_Eukaryota 176 1.03e-39   NTclustered gi|33946362|gb|AY294160.1| 5775 g2122 i0 82.828 39.8405797101449 198 32 95 2 2 198 778 974 Amoeba proteus actin mRNA, complete cds blastn 8247 176 1 Eukaryota Amoebozoa   Tubulinea Elardia Euamoebida Amoebidae Amoeba Amoeba proteus
9546359 9546359 PRJNA641991_S_NODE_11108_length_172_cov_1.243902_g10989_i0 PRJNA641991 11108 172 1.243902 2.13951144 Cryptodifflugia operculata 1078836 Tubulinea other_Eukaryota 200 4.87e-47   NTclustered gi|345452564|gb|JF694300.1| 1078836 g10989 i0 87.791 88.1918604651163 172 19 99 2 2 172 796 626 Cryptodifflugia operculata clone 4 actin gene, partial cds blastn 15169 200 1 Eukaryota Amoebozoa   Tubulinea Elardia Arcellinida Cryptodifflugiidae Cryptodifflugia Cryptodifflugia operculata
16461204 16461204 PRJNA641991_S_NODE_5913_length_224_cov_1.217143_g5794_i0 PRJNA641991 5913 224 1.217143 2.72640032 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 311 2.97e-80   NTclustered gi|399764267|gb|JQ271778.1| 1215988 g5794 i0 98.851 35.6205357142857 174 2 78 0 1 174 1751 1924 Tubulinea group 02 sp. HF1KJ 18S ribosomal RNA gene, partial sequence blastn 7979 311 1 Eukaryota Amoebozoa   Tubulinea         Tubulinea group 02 sp. HF1KJ

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;