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contig_metadata

5 rows where analysis = "blastn", bioproject = "PRJNA641991" and tax_phylum = "Microsporidia"

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tax_superkingdom 1

tax_phylum 1

  • Microsporidia · 5 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA641991 · 5 ✖

analysis 1

  • blastn · 5 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3168600 3168600 PRJNA641991_P_NODE_3983_length_162_cov_1.353982_g3942_i0 PRJNA641991 3983 162 1.353982 2.19345084 Ecytonucleospora hepatopenaei 646526 Fungi Fungi 165 1.66e-36   NTclustered gi|2522768008|gb|OR162445.1| 646526 g3942 i0 85.093 0.993827160493827 161 24 99 0 1 161 2937 2777 Enterocytozoon hepatopenaei strain SHFX2 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 161 165 1 Eukaryota Opisthokonta Fungi Microsporidia     Enterocytozoonidae Ecytonucleospora Ecytonucleospora hepatopenaei
8271014 8271014 PRJNA641991_P_NODE_3327_length_167_cov_0.864407_g3286_i0 PRJNA641991 3327 167 0.864407 1.44355969 Ecytonucleospora hepatopenaei 646526 Fungi Fungi 159 8.02e-35   NTclustered gi|2522768008|gb|OR162445.1| 646526 g3286 i0 85.443 0.946107784431138 158 17 93 6 13 167 2611 2765 Enterocytozoon hepatopenaei strain SHFX2 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 158 159 1 Eukaryota Opisthokonta Fungi Microsporidia     Enterocytozoonidae Ecytonucleospora Ecytonucleospora hepatopenaei
8271057 8271057 PRJNA641991_S_NODE_4307_length_257_cov_1.913462_g4188_i0 PRJNA641991 4307 257 1.913462 4.91759734 Ecytonucleospora hepatopenaei 646526 Fungi Fungi 195 3.67e-45   NTclustered gi|2522768008|gb|OR162445.1| 646526 g4188 i0 80.534 7.58365758754864 262 43 100 8 1 257 2055 1797 Enterocytozoon hepatopenaei strain SHFX2 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 1949 195 1 Eukaryota Opisthokonta Fungi Microsporidia     Enterocytozoonidae Ecytonucleospora Ecytonucleospora hepatopenaei
8271069 8271069 PRJNA641991_S_NODE_7607_length_201_cov_1.585526_g7488_i0 PRJNA641991 7607 201 1.585526 3.18690726 Ecytonucleospora hepatopenaei 646526 Fungi Fungi 211 2.73e-50   NTclustered gi|2522768008|gb|OR162445.1| 646526 g7488 i0 90.123 3.11940298507463 162 16 81 0 40 201 2280 2441 Enterocytozoon hepatopenaei strain SHFX2 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 627 211 1 Eukaryota Opisthokonta Fungi Microsporidia     Enterocytozoonidae Ecytonucleospora Ecytonucleospora hepatopenaei
15920626 15920626 PRJNA641991_S_NODE_3293_length_290_cov_3.522822_g3174_i0 PRJNA641991 3293 290 3.522822 10.2161838 Ecytonucleospora hepatopenaei 646526 Fungi Fungi 178 4.25e-40   NTclustered gi|2522768008|gb|OR162445.1| 646526 g3174 i0 94.783 0.396551724137931 115 5 39 1 177 290 3206 3320 Enterocytozoon hepatopenaei strain SHFX2 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 115 178 1 Eukaryota Opisthokonta Fungi Microsporidia     Enterocytozoonidae Ecytonucleospora Ecytonucleospora hepatopenaei

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;