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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA641991" and tax_phylum = "Evosea"

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tax_superkingdom 1

tax_phylum 1

  • Evosea · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA641991 · 2 ✖

analysis 1

  • blastn · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
10822020 10822020 PRJNA641991_S_NODE_6569_length_214_cov_4.460606_g6450_i0 PRJNA641991 6569 214 4.460606 9.54569684 Dictyostelium purpureum 5786 Evosea other_Eukaryota 154 5.02e-33   NTclustered gi|330843266|ref|XM_003293532.1| 5786 g6450 i0 87.407 10.2803738317757 135 16 63 1 80 214 165 298 Dictyostelium purpureum ADP-ribosylation factor 1 (arfA), mRNA blastn 2200 154 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium purpureum
14646719 14646719 PRJNA641991_S_NODE_5852_length_225_cov_1.392045_g5733_i0 PRJNA641991 5852 225 1.392045 3.13210125 Dictyostelium discoideum 44689 Evosea other_Eukaryota 220 5.18e-53   NTclustered gi|66821326|ref|XM_639065.1| 352472 g5733 i0 84.375 98.4133333333333 224 35 99 0 1 224 806 583 Dictyostelium discoideum AX4 hypothetical protein (act13) mRNA, complete cds blastn 22143 220 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium discoideum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;