RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

15 rows where analysis = "blastn", bioproject = "PRJNA641991" and tax_phylum = "Cnidaria"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Cnidaria · 15 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA641991 · 15 ✖

analysis 1

  • blastn · 15 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
617760 617760 PRJNA641991_S_NODE_14561_length_161_cov_1.366071_g14442_i0 PRJNA641991 14561 161 1.366071 2.19937431 Actinia tenebrosa 6105 Cnidaria other_Eukaryota 89.8 1.02e-13   NTclustered gi|1778039994|ref|XM_031701610.1| 6105 g14442 i0 92.063 2.67080745341615 63 5 39 0 99 161 153 215 PREDICTED: Actinia tenebrosa tubulin alpha-1 chain-like (LOC116294078), partial mRNA blastn 430 89.8 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Actiniaria Actiniidae Actinia Actinia tenebrosa
7536302 7536302 PRJNA641991_S_NODE_6706_length_212_cov_2.165644_g6587_i0 PRJNA641991 6706 212 2.165644 4.59116528 Metazoa 33208 Cnidaria other_Eukaryota 250 6.1599999999999994e-62   NTclustered gi|2782835665|ref|XM_067053980.1| 252671 g6587 i0 88.152 95.8396226415094 211 24 99 1 1 210 1345 1135 PREDICTED: Clytia hemisphaerica tubulin alpha-1A chain-like (LOC136797397), mRNA blastn 20318 250 1 Eukaryota Opisthokonta Metazoa Cnidaria Hydrozoa Leptothecata Clytiidae Clytia Clytia hemisphaerica
8271062 8271062 PRJNA641991_S_NODE_6047_length_222_cov_1.150289_g5928_i0 PRJNA641991 6047 222 1.150289 2.55364158 Xenia sp. Carnegie-2017 2897299 Cnidaria other_Eukaryota 145 3.16e-30   NTclustered gi|2202626756|ref|XM_046990698.1| 2897299 g5928 i0 80.645 38.3558558558559 186 36 84 0 36 221 1262 1447 PREDICTED: Xenia sp. Carnegie-2017 heat shock protein 60A-like (LOC124440324), mRNA blastn 8515 145 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Malacalcyonacea Xeniidae Xenia Xenia sp. Carnegie-2017
10822009 10822009 PRJNA641991_S_NODE_4749_length_246_cov_0.939086_g4630_i0 PRJNA641991 4749 246 0.939086 2.31015156 Hydra vulgaris 6087 Cnidaria other_Eukaryota 183 7.549999999999997e-42   NTclustered gi|2213067084|ref|XM_047285907.1| 6087 g4630 i0 80.321 14.6178861788618 249 43 100 4 1 246 825 580 PREDICTED: Hydra vulgaris serine/threonine-protein phosphatase alpha-2 isoform (LOC100198416), mRNA blastn 3596 183 1 Eukaryota Opisthokonta Metazoa Cnidaria Hydrozoa Anthoathecata Hydridae Hydra Hydra vulgaris
13371797 13371797 PRJNA641991_S_NODE_10111_length_179_cov_1.569231_g9992_i0 PRJNA641991 10111 179 1.569231 2.80892349 Obelia geniculata 185004 Cnidaria other_Eukaryota 154 4.04e-33   NTclustered gi|62825475|gb|AY789874.1| 185004 g9992 i0 82.286 20.0335195530726 175 31 98 0 5 179 379 205 Obelia geniculata voucher 713NB calmodulin gene, partial cds blastn 3586 154 1 Eukaryota Opisthokonta Metazoa Cnidaria Hydrozoa Leptothecata Obeliidae Obelia Obelia geniculata
15920588 15920588 PRJNA641991_P_NODE_2013_length_216_cov_1.353293_g1972_i0 PRJNA641991 2013 216 1.353293 2.92311288 Clytia hemisphaerica 252671 Cnidaria other_Eukaryota 222 1.37e-53   NTclustered gi|2782941961|ref|XM_067076399.1| 252671 g1972 i0 85.185 54.787037037037 216 32 100 0 1 216 225 440 PREDICTED: Clytia hemisphaerica tubulin alpha-1A chain-like (LOC136820162), mRNA blastn 11834 222 1 Eukaryota Opisthokonta Metazoa Cnidaria Hydrozoa Leptothecata Clytiidae Clytia Clytia hemisphaerica
15920627 15920627 PRJNA641991_S_NODE_3633_length_277_cov_2.574561_g3514_i0 PRJNA641991 3633 277 2.574561 7.1315339699999996 Clytia hemisphaerica 252671 Cnidaria other_Eukaryota 239 1.82e-58   NTclustered gi|2782951454|ref|XM_067078864.1| 252671 g3514 i0 82.482 73.3682310469314 274 46 99 2 5 277 454 182 PREDICTED: Clytia hemisphaerica tubulin beta-4B chain-like (LOC136822602), mRNA blastn 20323 239 1 Eukaryota Opisthokonta Metazoa Cnidaria Hydrozoa Leptothecata Clytiidae Clytia Clytia hemisphaerica
17736312 17736312 PRJNA641991_S_NODE_2774_length_316_cov_2.453184_g2655_i0 PRJNA641991 2774 316 2.453184 7.75206144 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 292 1.6e-74   NTclustered gi|2519007827|ref|XM_057455710.1| 13093 g2655 i0 83.596 99.7626582278481 317 46 99 6 3 316 960 647 PREDICTED: Hydractinia symbiolongicarpus actin, non-muscle 6.2 (LOC130649433), mRNA blastn 31525 292 1 Eukaryota Opisthokonta Metazoa Cnidaria Hydrozoa Anthoathecata Hydractiniidae Hydractinia Hydractinia symbiolongicarpus
18470022 18470022 PRJNA641991_S_NODE_3175_length_296_cov_1.983806_g3056_i0 PRJNA641991 3175 296 1.983806 5.87206576 Hydra vulgaris 6087 Cnidaria other_Eukaryota 54.7 0.008   NTclustered gi|2744889029|ref|XM_065810454.1| 6087 g3056 i0 100 0.195945945945946 29 0 10 0 231 259 2276 2248 PREDICTED: Hydra vulgaris kinesin-like protein KIF28P (LOC100208423), transcript variant X3, mRNA blastn 58 54.7 1 Eukaryota Opisthokonta Metazoa Cnidaria Hydrozoa Anthoathecata Hydridae Hydra Hydra vulgaris
19744646 19744646 PRJNA641991_S_NODE_6156_length_220_cov_1.473684_g6037_i0 PRJNA641991 6156 220 1.473684 3.2421048 Hydractinia symbiolongicarpus 13093 Cnidaria other_Eukaryota 172 1.43e-38   NTclustered gi|2518981757|ref|XM_057441245.1| 13093 g6037 i0 81.364 2.19545454545455 220 34 99 7 2 218 512 297 PREDICTED: Hydractinia symbiolongicarpus mitochondrial-processing peptidase subunit beta-like (LOC130626140), mRNA blastn 483 172 1 Eukaryota Opisthokonta Metazoa Cnidaria Hydrozoa Anthoathecata Hydractiniidae Hydractinia Hydractinia symbiolongicarpus
21020156 21020156 PRJNA641991_P_NODE_917_length_350_cov_1.013289_g876_i0 PRJNA641991 917 350 1.013289 3.5465115 Hydractinia symbiolongicarpus 13093 Cnidaria other_Eukaryota 167 1.13e-36   NTclustered gi|2518990952|ref|XM_057446321.1| 13093 g876 i0 80.087 4.84857142857143 231 40 65 4 123 350 1357 1130 PREDICTED: Hydractinia symbiolongicarpus eukaryotic initiation factor 4A-I-like (LOC130636561), mRNA blastn 1697 167 1 Eukaryota Opisthokonta Metazoa Cnidaria Hydrozoa Anthoathecata Hydractiniidae Hydractinia Hydractinia symbiolongicarpus
21020206 21020206 PRJNA641991_S_NODE_8397_length_193_cov_2.736111_g8278_i0 PRJNA641991 8397 193 2.736111 5.28069423 Clytia hemisphaerica 252671 Cnidaria other_Eukaryota 207 3.36e-49   NTclustered gi|2782873195|ref|XM_067061561.1| 252671 g8278 i0 86.01 33.7668393782383 193 27 100 0 1 193 139 331 PREDICTED: Clytia hemisphaerica tubulin alpha-1 chain-like (LOC136805029), mRNA blastn 6517 207 1 Eukaryota Opisthokonta Metazoa Cnidaria Hydrozoa Leptothecata Clytiidae Clytia Clytia hemisphaerica
21560371 21560371 PRJNA641991_S_NODE_4637_length_248_cov_3.698492_g4518_i0 PRJNA641991 4637 248 3.698492 9.17226016 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 87.9 6.15e-13   NTclustered gi|2114279968|ref|XM_029330392.2| 45264 g4518 i0 84.884 6.90322580645161 86 13 35 0 1 86 1523 1608 PREDICTED: Acropora millepora tubulin beta-4B chain (LOC114953952), mRNA blastn 1712 87.9 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Scleractinia Acroporidae Acropora Acropora millepora
23570512 23570512 PRJNA641991_S_NODE_4779_length_245_cov_1.301020_g4660_i0 PRJNA641991 4779 245 1.30102 3.187499 Hydractinia symbiolongicarpus 13093 Cnidaria other_Eukaryota 180 9.72e-41   NTclustered gi|2518959034|ref|XM_057433457.1| 13093 g4660 i0 81.991 1.79183673469388 211 38 86 0 18 228 833 623 PREDICTED: Hydractinia symbiolongicarpus ruvB-like 2 (LOC130612159), partial mRNA blastn 439 180 1 Eukaryota Opisthokonta Metazoa Cnidaria Hydrozoa Anthoathecata Hydractiniidae Hydractinia Hydractinia symbiolongicarpus
25384776 25384776 PRJNA641991_S_NODE_2540_length_330_cov_1.217082_g2421_i0 PRJNA641991 2540 330 1.217082 4.0163706 Pocillopora 46730 Cnidaria other_Eukaryota 56.5 0.002   NTclustered gi|1524872234|ref|XM_027187692.1| 46731 g2421 i0 92.5 0.242424242424242 40 2 12 1 110 148 80 41 PREDICTED: Pocillopora damicornis THO complex subunit 4-like (LOC113671482), mRNA blastn 80 56.5 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Scleractinia Pocilloporidae Pocillopora Pocillopora damicornis

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;