RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA641991" and tax_phylum = "Bacillariophyta"

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tax_superkingdom 1

tax_phylum 1

  • Bacillariophyta · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA641991 · 3 ✖

analysis 1

  • blastn · 3 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2433541 2433541 PRJNA641991_S_NODE_11482_length_170_cov_0.842975_g11363_i0 PRJNA641991 11482 170 0.842975 1.4330575 Naviculaceae 67474 SAR_Eukaryotes SAR_Eukaryotes 309 7.64e-80   NTclustered gi|2301268953|ref|NC_066075.1| 355634 g11363 i0 99.412 197.994117647059 170 1 100 0 1 170 8725 8556 Navicula arenaria isolate Jiaozhou Bay in China chloroplast, complete genome blastn 33659 309 1 Eukaryota Sar   Bacillariophyta Bacillariophyceae Naviculales Naviculaceae Navicula Navicula arenaria
7536291 7536291 PRJNA641991_P_NODE_1846_length_226_cov_2.129944_g1805_i0 PRJNA641991 1846 226 2.129944 4.81367344 Rhopalodiales 245176 SAR_Eukaryotes SAR_Eukaryotes 396 8.069999999999997e-106   NTclustered gi|2325195844|gb|OM494341.1| 186043 g1805 i0 98.661 197.738938053097 224 2 99 1 3 226 89290 89068 Entomoneis sp. isolate C2 plastid, complete genome blastn 44689 396 1 Eukaryota Sar   Bacillariophyta Bacillariophyceae   Entomoneidaceae Entomoneis Entomoneis sp.
17736315 17736315 PRJNA641991_S_NODE_4634_length_248_cov_4.592965_g4515_i0 PRJNA641991 4634 248 4.592965 11.3905532 Entomoneis 186042 SAR_Eukaryotes SAR_Eukaryotes 431 2.47e-116   NTclustered gi|2325195844|gb|OM494341.1| 186043 g4515 i0 97.992 192.79435483871 249 3 100 2 1 248 89064 89311 Entomoneis sp. isolate C2 plastid, complete genome blastn 47813 431 1 Eukaryota Sar   Bacillariophyta Bacillariophyceae   Entomoneidaceae Entomoneis Entomoneis sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;