contig_metadata
10 rows where analysis = "blastn", bioproject = "PRJNA641991" and tax_clade = "FCB group"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1894025 | 1894025 | PRJNA641991_S_NODE_9382_length_185_cov_0.823529_g9263_i0 | PRJNA641991 | 9382 | 185 | 0.823529 | 1.52352865 | Maribacter sp. R86514 | 3093854 | Bacteria | Bacteria | 69.4 | 1.57e-7 | NTclustered | gi|2845113958|gb|CP138999.1| | 3093854 | g9263 | i0 | 93.478 | 3.40540540540541 | 46 | 3 | 25 | 0 | 37 | 82 | 1039078 | 1039033 | Maribacter sp. R86514 chromosome, complete genome | blastn | 630 | 69.4 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Flavobacteriia | Flavobacteriales | Flavobacteriaceae | Maribacter | Maribacter sp. R86514 | |
| 2433542 | 2433542 | PRJNA641991_S_NODE_12602_length_166_cov_0.871795_g12483_i0 | PRJNA641991 | 12602 | 166 | 0.871795 | 1.4471797 | Flavobacterium | 237 | Bacteria | Bacteria | 237 | 3.58e-58 | NTclustered | gi|2643654678|gb|CP136574.1| | 239 | g12483 | i0 | 93.168 | 3.59638554216867 | 161 | 11 | 97 | 0 | 1 | 161 | 1539044 | 1539204 | MAG: Flavobacterium sp. isolate GU0601_MAG5 chromosome, complete genome | blastn | 597 | 237 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Flavobacteriia | Flavobacteriales | Flavobacteriaceae | Flavobacterium | Flavobacterium sp. | |
| 8271035 | 8271035 | PRJNA641991_S_NODE_14407_length_162_cov_0.902655_g14288_i0 | PRJNA641991 | 14407 | 162 | 0.902655 | 1.4623011 | Flavobacterium sp. TR2 | 2977321 | Bacteria | Bacteria | 300 | 4.36e-77 | NTclustered | gi|2304704138|gb|CP104307.1| | 2977321 | g14288 | i0 | 100 | 49.7222222222222 | 162 | 0 | 100 | 0 | 1 | 162 | 151146 | 150985 | Flavobacterium sp. TR2 chromosome, complete genome | blastn | 8055 | 300 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Flavobacteriia | Flavobacteriales | Flavobacteriaceae | Flavobacterium | Flavobacterium sp. TR2 | |
| 10086915 | 10086915 | PRJNA641991_S_NODE_11288_length_171_cov_1.254098_g11169_i0 | PRJNA641991 | 11288 | 171 | 1.254098 | 2.14450758 | Aquirufa | 2676247 | Bacteria | Bacteria | 305 | 9.96e-79 | NTclustered | gi|1390254249|gb|CP029346.1| | 2516557 | g11169 | i0 | 98.83 | 347.654970760234 | 171 | 2 | 100 | 0 | 1 | 171 | 360555 | 360725 | Aquirufa nivalisilvae strain HME7025 chromosome, complete genome | blastn | 59449 | 305 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Cytophagia | Cytophagales | Flectobacillaceae | Aquirufa | Aquirufa nivalisilvae | |
| 12097159 | 12097159 | PRJNA641991_S_NODE_10030_length_180_cov_1.137405_g9911_i0 | PRJNA641991 | 10030 | 180 | 1.137405 | 2.047329 | Spirosoma radiotolerans | 1379870 | Bacteria | Bacteria | 102 | 1.49e-17 | NTclustered | gi|808692684|gb|CP010429.1| | 1379870 | g9911 | i0 | 94.03 | 20.2666666666667 | 67 | 4 | 37 | 0 | 1 | 67 | 4385050 | 4385116 | Spirosoma radiotolerans strain DG5A, complete genome | blastn | 3648 | 102 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Cytophagia | Cytophagales | Cytophagaceae | Spirosoma | Spirosoma radiotolerans | |
| 15186864 | 15186864 | PRJNA641991_S_NODE_14412_length_162_cov_0.902655_g14293_i0 | PRJNA641991 | 14412 | 162 | 0.902655 | 1.4623011 | Chryseobacterium | 59732 | Bacteria | Bacteria | 300 | 4.36e-77 | NTclustered | gi|2429070341|gb|CP115857.1| | 373672 | g14293 | i0 | 100 | 91.2222222222222 | 162 | 0 | 100 | 0 | 1 | 162 | 3306083 | 3305922 | Chryseobacterium gambrini strain PL22-1A chromosome, complete genome | blastn | 14778 | 300 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Flavobacteriia | Flavobacteriales | Weeksellaceae | Chryseobacterium | Chryseobacterium gambrini | |
| 15920605 | 15920605 | PRJNA641991_S_NODE_10953_length_173_cov_1.233871_g10834_i0 | PRJNA641991 | 10953 | 173 | 1.233871 | 2.13459683 | Flavobacterium ammoniigenes | 1751095 | Bacteria | Bacteria | 315 | 1.68e-81 | NTclustered | gi|2119750057|dbj|AP025184.1| | 1751095 | g10834 | i0 | 99.422 | 98.6820809248555 | 173 | 1 | 100 | 0 | 1 | 173 | 1118616 | 1118444 | Flavobacterium ammoniigenes GENT5 DNA, complete genome | blastn | 17072 | 315 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Flavobacteriia | Flavobacteriales | Flavobacteriaceae | Flavobacterium | Flavobacterium ammoniigenes | |
| 17736313 | 17736313 | PRJNA641991_S_NODE_3174_length_296_cov_2.008097_g3055_i0 | PRJNA641991 | 3174 | 296 | 2.008097 | 5.94396712 | Flavobacterium | 237 | Bacteria | Bacteria | 444 | 3.88e-120 | NTclustered | gi|2164473264|gb|CP089095.1| | 2895947 | g3055 | i0 | 93.919 | 525.760135135135 | 296 | 14 | 99 | 4 | 3 | 296 | 979677 | 979384 | Flavobacterium cyclinae strain KSM-R2A25 chromosome, complete genome | blastn | 155625 | 448 | 0.991071428571429 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Flavobacteriia | Flavobacteriales | Flavobacteriaceae | Flavobacterium | Flavobacterium cyclinae | |
| 19744620 | 19744620 | PRJNA641991_S_NODE_13796_length_163_cov_0.894737_g13677_i0 | PRJNA641991 | 13796 | 163 | 0.894737 | 1.45842131 | Flavobacterium cyclinae | 2895947 | Bacteria | Bacteria | 235 | 1.26e-57 | NTclustered | gi|2164473264|gb|CP089095.1| | 2895947 | g13677 | i0 | 92.638 | 11.920245398773 | 163 | 12 | 100 | 0 | 1 | 163 | 300137 | 300299 | Flavobacterium cyclinae strain KSM-R2A25 chromosome, complete genome | blastn | 1943 | 235 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Flavobacteriia | Flavobacteriales | Flavobacteriaceae | Flavobacterium | Flavobacterium cyclinae | |
| 21020189 | 21020189 | PRJNA641991_S_NODE_5417_length_232_cov_1.617486_g5298_i0 | PRJNA641991 | 5417 | 232 | 1.617486 | 3.75256752 | Flavobacterium sp. TR2 | 2977321 | Bacteria | Bacteria | 403 | 4.97e-108 | NTclustered | gi|2304704138|gb|CP104307.1| | 2977321 | g5298 | i0 | 98.276 | 6.15086206896552 | 232 | 1 | 100 | 1 | 1 | 232 | 1320621 | 1320849 | Flavobacterium sp. TR2 chromosome, complete genome | blastn | 1427 | 403 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Flavobacteriia | Flavobacteriales | Flavobacteriaceae | Flavobacterium | Flavobacterium sp. TR2 |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;