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contig_metadata

12 rows where analysis = "blastn", bioproject = "PRJNA641991" and tax_clade = "Amoebozoa"

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tax_phylum 3

tax_superkingdom 1

tax_clade 1

  • Amoebozoa · 12 ✖

bioproject 1

  • PRJNA641991 · 12 ✖

analysis 1

  • blastn · 12 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3168593 3168593 PRJNA641991_P_NODE_2163_length_207_cov_1.607595_g2122_i0 PRJNA641991 2163 207 1.607595 3.32772165 Amoeba proteus 5775 Tubulinea other_Eukaryota 176 1.03e-39   NTclustered gi|33946362|gb|AY294160.1| 5775 g2122 i0 82.828 39.8405797101449 198 32 95 2 2 198 778 974 Amoeba proteus actin mRNA, complete cds blastn 8247 176 1 Eukaryota Amoebozoa   Tubulinea Elardia Euamoebida Amoebidae Amoeba Amoeba proteus
3168646 3168646 PRJNA641991_S_NODE_6063_length_221_cov_5.319767_g5944_i0 PRJNA641991 6063 221 5.319767 11.75668507 uncultured Amoebozoa 590481 Root_unresolved Root_unresolved 409 1.0100000000000001e-109   NTclustered gi|365928255|gb|JN825705.1| 590481 g5944 i0 100 82.8597285067873 221 0 100 0 1 221 757 977 Uncultured Amoebozoa clone Alchichica_AQ2b_5E_39 small subunit ribosomal RNA gene, partial sequence blastn 18312 409 1 Eukaryota Amoebozoa             uncultured Amoebozoa
4986753 4986753 PRJNA641991_P_NODE_604_length_451_cov_3.761194_g563_i0 PRJNA641991 604 451 3.761194 16.96298494 Vexillifera 218659 Root_unresolved Root_unresolved 433 1.3399999999999995e-116   NTclustered gi|221185864|gb|FJ577811.1| 590481 g563 i0 84.076 33.7472283813747 471 52 100 17 1 451 1767 1300 Uncultured Amoebozoa clone Ivry07 18S ribosomal RNA gene, partial sequence blastn 15220 433 1 Eukaryota Amoebozoa             uncultured Amoebozoa
4986771 4986771 PRJNA641991_S_NODE_9864_length_181_cov_1.227273_g9745_i0 PRJNA641991 9864 181 1.227273 2.22136413 Vexillifera 218659 Root_unresolved Root_unresolved 335 1.36e-87   NTclustered gi|221185864|gb|FJ577811.1| 590481 g9745 i0 100 12.4806629834254 181 0 100 0 1 181 1538 1358 Uncultured Amoebozoa clone Ivry07 18S ribosomal RNA gene, partial sequence blastn 2259 335 1 Eukaryota Amoebozoa             uncultured Amoebozoa
9546359 9546359 PRJNA641991_S_NODE_11108_length_172_cov_1.243902_g10989_i0 PRJNA641991 11108 172 1.243902 2.13951144 Cryptodifflugia operculata 1078836 Tubulinea other_Eukaryota 200 4.87e-47   NTclustered gi|345452564|gb|JF694300.1| 1078836 g10989 i0 87.791 88.1918604651163 172 19 99 2 2 172 796 626 Cryptodifflugia operculata clone 4 actin gene, partial cds blastn 15169 200 1 Eukaryota Amoebozoa   Tubulinea Elardia Arcellinida Cryptodifflugiidae Cryptodifflugia Cryptodifflugia operculata
9546370 9546370 PRJNA641991_S_NODE_2228_length_351_cov_2.927152_g2109_i0 PRJNA641991 2228 351 2.927152 10.27430352 uncultured Amoebozoa 590481 Root_unresolved Root_unresolved 401 2.86e-107   NTclustered gi|221185864|gb|FJ577811.1| 590481 g2109 i0 87.193 59.1481481481481 367 29 100 12 1 351 1194 1558 Uncultured Amoebozoa clone Ivry07 18S ribosomal RNA gene, partial sequence blastn 20761 401 1 Eukaryota Amoebozoa             uncultured Amoebozoa
10822020 10822020 PRJNA641991_S_NODE_6569_length_214_cov_4.460606_g6450_i0 PRJNA641991 6569 214 4.460606 9.54569684 Dictyostelium purpureum 5786 Evosea other_Eukaryota 154 5.02e-33   NTclustered gi|330843266|ref|XM_003293532.1| 5786 g6450 i0 87.407 10.2803738317757 135 16 63 1 80 214 165 298 Dictyostelium purpureum ADP-ribosylation factor 1 (arfA), mRNA blastn 2200 154 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium purpureum
12097165 12097165 PRJNA641991_S_NODE_11670_length_168_cov_1.957983_g11551_i0 PRJNA641991 11670 168 1.957983 3.28941144 Cochliopodium spiniferum 313558 Discosea other_Eukaryota 150 4.86e-32   NTclustered gi|330902897|gb|JF298273.1| 313558 g11551 i0 83.133 20.3809523809524 166 26 98 2 2 166 199 363 Cochliopodium spiniferum clone 5102 actin gene, partial cds blastn 3424 150 1 Eukaryota Amoebozoa   Discosea   Himatismenida Cochliopodiidae Cochliopodium Cochliopodium spiniferum
14646719 14646719 PRJNA641991_S_NODE_5852_length_225_cov_1.392045_g5733_i0 PRJNA641991 5852 225 1.392045 3.13210125 Dictyostelium discoideum 44689 Evosea other_Eukaryota 220 5.18e-53   NTclustered gi|66821326|ref|XM_639065.1| 352472 g5733 i0 84.375 98.4133333333333 224 35 99 0 1 224 806 583 Dictyostelium discoideum AX4 hypothetical protein (act13) mRNA, complete cds blastn 22143 220 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium discoideum
16461204 16461204 PRJNA641991_S_NODE_5913_length_224_cov_1.217143_g5794_i0 PRJNA641991 5913 224 1.217143 2.72640032 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 311 2.97e-80   NTclustered gi|399764267|gb|JQ271778.1| 1215988 g5794 i0 98.851 35.6205357142857 174 2 78 0 1 174 1751 1924 Tubulinea group 02 sp. HF1KJ 18S ribosomal RNA gene, partial sequence blastn 7979 311 1 Eukaryota Amoebozoa   Tubulinea         Tubulinea group 02 sp. HF1KJ
23570499 23570499 PRJNA641991_S_NODE_339_length_855_cov_20.884615_g266_i0 PRJNA641991 339 855 20.884615 178.56345825 uncultured Amoebozoa 590481 Root_unresolved Root_unresolved 874 0   NTclustered gi|221185864|gb|FJ577811.1| 590481 g266 i0 88.472 28.3239766081871 746 57 95 20 1 719 268 1011 Uncultured Amoebozoa clone Ivry07 18S ribosomal RNA gene, partial sequence blastn 24217 874 1 Eukaryota Amoebozoa             uncultured Amoebozoa
24110285 24110285 PRJNA641991_S_NODE_4679_length_247_cov_7.207071_g4560_i0 PRJNA641991 4679 247 7.207071 17.80146537 Vexillifera 218659 Root_unresolved Root_unresolved 265 2.63e-66   NTclustered gi|221185864|gb|FJ577811.1| 590481 g4560 i0 86.056 42.6113360323887 251 30 100 5 1 247 1785 1536 Uncultured Amoebozoa clone Ivry07 18S ribosomal RNA gene, partial sequence blastn 10525 265 1 Eukaryota Amoebozoa             uncultured Amoebozoa

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;