contig_metadata
99 rows where analysis = "blastn", bioproject = "PRJNA641707" and tax_phylum = "Spirochaetota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 616403 | 616403 | PRJNA641707_P_NODE_42101_length_335_cov_13.332168_g39458_i0 | PRJNA641707 | 42101 | 335 | 13.332168 | 44.6627628 | Treponema sp. Marseille-Q4132 | 2766701 | Bacteria | Bacteria | 547 | 3.3099999999999984e-151 | NTclustered | gi|1897717435|gb|CP060591.1| | 2766701 | g39458 | i0 | 96.131 | 187.707462686567 | 336 | 11 | 99 | 1 | 2 | 335 | 1778739 | 1778404 | Treponema sp. Marseille-Q4132 chromosome | blastn | 62882 | 547 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema sp. Marseille-Q4132 | ||
| 616895 | 616895 | PRJNA641707_P_NODE_62281_length_269_cov_2.400000_g59620_i0 | PRJNA641707 | 62281 | 269 | 2.4 | 6.456 | Treponema parvum | 138851 | Bacteria | Bacteria | 185 | 2.3299999999999993e-42 | NTclustered | gi|2023444933|gb|CP054257.1| | 138851 | g59620 | i0 | 100 | 194.2156133829 | 100 | 0 | 80 | 0 | 2 | 101 | 1515655 | 1515754 | Treponema parvum strain ATCC 700773 chromosome, complete genome | blastn | 52244 | 185 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema parvum | ||
| 1157931 | 1157931 | PRJNA641707_P_NODE_48201_length_311_cov_13.404580_g45546_i0 | PRJNA641707 | 48201 | 311 | 13.40458 | 41.6882438 | Treponema | 157 | Bacteria | Bacteria | 460 | 4.079999999999999e-125 | NTclustered | gi|470488561|ref|NR_076878.1| | 81028 | g45546 | i0 | 93.569 | 176.771704180064 | 311 | 16 | 99 | 3 | 1 | 308 | 1926 | 1617 | Treponema brennaborense strain DD5/3 23S ribosomal RNA gene, complete sequence | blastn | 54976 | 460 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema brennaborense | ||
| 1888174 | 1888174 | PRJNA641707_P_NODE_154482_length_228_cov_8.497207_g151819_i0 | PRJNA641707 | 154482 | 228 | 8.497207 | 19.37363196 | Treponema brennaborense | 81028 | Bacteria | Bacteria | 287 | 5.119999999999999e-73 | NTclustered | gi|332179772|gb|CP002696.1| | 906968 | g151819 | i0 | 90.09 | 161.399122807018 | 222 | 21 | 99 | 1 | 5 | 226 | 2505584 | 2505364 | Treponema brennaborense DSM 12168, complete genome | blastn | 36799 | 287 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema brennaborense | ||
| 1888236 | 1888236 | PRJNA641707_P_NODE_156782_length_222_cov_22.849711_g154119_i0 | PRJNA641707 | 156782 | 222 | 22.849711 | 50.72635842 | Treponema bryantii | 163 | Bacteria | Bacteria | 259 | 1.08e-64 | NTclustered | gi|2581915939|dbj|AP025286.1| | 163 | g154119 | i0 | 88.532 | 179.72972972973 | 218 | 19 | 98 | 5 | 6 | 219 | 703542 | 703757 | Treponema bryantii JCM 32280 DNA, complete genome | blastn | 39900 | 259 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema bryantii | ||
| 1889181 | 1889181 | PRJNA641707_P_NODE_197002_length_198_cov_3.604027_g194339_i0 | PRJNA641707 | 197002 | 198 | 3.604027 | 7.13597346 | Treponema bryantii | 163 | Bacteria | Bacteria | 195 | 2.7000000000000002e-45 | NTclustered | gi|2581915939|dbj|AP025286.1| | 163 | g194339 | i0 | 85.792 | 10.146464646464599 | 183 | 26 | 92 | 0 | 8 | 190 | 1585548 | 1585730 | Treponema bryantii JCM 32280 DNA, complete genome | blastn | 2009 | 195 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema bryantii | ||
| 2431700 | 2431700 | PRJNA641707_P_NODE_166802_length_202_cov_7.424837_g164139_i0 | PRJNA641707 | 166802 | 202 | 7.424837 | 14.99817074 | Treponema | 157 | Bacteria | Bacteria | 128 | 2.8399999999999998e-25 | NTclustered | gi|2265148008|gb|CP051201.1| | 2563665 | g164139 | i0 | 92.308 | 77.9306930693069 | 91 | 6 | 45 | 1 | 111 | 200 | 1623028 | 1622938 | Treponema sp. OMZ 790 chromosome, complete genome | blastn | 15742 | 128 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema sp. OMZ 790 | ||
| 2432206 | 2432206 | PRJNA641707_P_NODE_235182_length_188_cov_6.129496_g232519_i0 | PRJNA641707 | 235182 | 188 | 6.129496 | 11.52345248 | Treponema | 157 | Bacteria | Bacteria | 128 | 2.6e-25 | NTclustered | gi|2265163189|gb|CP051302.1| | 158 | g232519 | i0 | 79.894 | 75.0531914893617 | 189 | 26 | 98 | 10 | 1 | 185 | 562328 | 562148 | Treponema denticola strain OMZ 853 chromosome, complete genome | blastn | 14110 | 128 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema denticola | ||
| 2432763 | 2432763 | PRJNA641707_P_NODE_312622_length_160_cov_13.504505_g309959_i0 | PRJNA641707 | 312622 | 160 | 13.504505 | 21.607208 | Brachyspira | 29521 | Bacteria | Bacteria | 281 | 1.55e-71 | NTclustered | gi|2021755399|gb|CP046930.1| | 159 | g309959 | i0 | 100 | 83.7125 | 152 | 0 | 95 | 0 | 2 | 153 | 2160307 | 2160156 | Brachyspira hyodysenteriae strain BHZ375 chromosome, complete genome | blastn | 13394 | 281 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Brachyspirales | Brachyspiraceae | Brachyspira | Brachyspira hyodysenteriae | ||
| 3162513 | 3162513 | PRJNA641707_P_NODE_136823_length_242_cov_13.575130_g134160_i0 | PRJNA641707 | 136823 | 242 | 13.57513 | 32.8518146 | Leptospira cinconiae | 3235173 | Bacteria | Bacteria | 54.7 | 0.006 | NTclustered | gi|2777192084|gb|CP162137.1| | 3235173 | g134160 | i0 | 100 | 0.119834710743802 | 29 | 0 | 12 | 0 | 202 | 230 | 1984319 | 1984291 | Leptospira cinconiae strain WS58.C1 chromosome 1, complete sequence | blastn | 29 | 54.7 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Leptospirales | Leptospiraceae | Leptospira | Leptospira cinconiae | ||
| 4443685 | 4443685 | PRJNA641707_P_NODE_327624_length_155_cov_3.867925_g324961_i0 | PRJNA641707 | 327624 | 155 | 3.867925 | 5.99528375 | Treponema vincentii | 69710 | Bacteria | Bacteria | 159 | 7.3e-35 | NTclustered | gi|2265136109|gb|CP051197.1| | 69710 | g324961 | i0 | 86.395 | 1.89677419354839 | 147 | 19 | 95 | 1 | 6 | 152 | 484078 | 484223 | Treponema vincentii strain OMZ 802 chromosome, complete genome | blastn | 294 | 159 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema vincentii | ||
| 4985182 | 4985182 | PRJNA641707_P_NODE_220204_length_193_cov_6.041667_g217541_i0 | PRJNA641707 | 220204 | 193 | 6.041667 | 11.66041731 | Treponema | 157 | Bacteria | Bacteria | 351 | 1.46e-92 | NTclustered | gi|2265166044|gb|CP051303.1| | 158 | g217541 | i0 | 100 | 31.5025906735751 | 190 | 0 | 98 | 0 | 1 | 190 | 733240 | 733051 | Treponema denticola strain OT2B chromosome, complete genome | blastn | 6080 | 351 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema denticola | ||
| 4986660 | 4986660 | PRJNA641707_P_NODE_90824_length_246_cov_5.583756_g88161_i0 | PRJNA641707 | 90824 | 246 | 5.583756 | 13.73603976 | Gracilinema | 2951106 | Bacteria | Bacteria | 165 | 2.74e-36 | NTclustered | gi|470488994|ref|NR_076899.1| | 215591 | g88161 | i0 | 96.04 | 2.2520325203252 | 101 | 4 | 41 | 0 | 1 | 101 | 871 | 771 | Treponema caldarium strain H1 23S ribosomal RNA, complete sequence | blastn | 554 | 165 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Breznakiellaceae | Gracilinema | Gracilinema caldarium | ||
| 5719338 | 5719338 | PRJNA641707_P_NODE_316465_length_159_cov_4.609091_g313802_i0 | PRJNA641707 | 316465 | 159 | 4.609091 | 7.32845469 | Treponema sp. OMZ 855 | 1643512 | Bacteria | Bacteria | 161 | 2.1e-35 | NTclustered | gi|2265125022|gb|CP051194.1| | 1643512 | g313802 | i0 | 86 | 0.943396226415094 | 150 | 21 | 94 | 0 | 6 | 155 | 496038 | 495889 | Treponema sp. OMZ 855 chromosome, complete genome | blastn | 150 | 161 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema sp. OMZ 855 | ||
| 6995964 | 6995964 | PRJNA641707_P_NODE_86186_length_246_cov_6.461929_g83523_i0 | PRJNA641707 | 86186 | 246 | 6.461929 | 15.89634534 | Treponema sp. feline oral taxon 211 | 1577414 | Bacteria | Bacteria | 185 | 2.1e-42 | NTclustered | gi|728056011|gb|KM462169.1| | 1577414 | g83523 | i0 | 100 | 66.3170731707317 | 100 | 0 | 80 | 0 | 147 | 246 | 1083 | 1182 | Treponema sp. feline oral taxon 211 clone UJ017 16S ribosomal RNA gene, partial sequence | blastn | 16314 | 185 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema sp. feline oral taxon 211 | ||
| 6996042 | 6996042 | PRJNA641707_P_NODE_89546_length_246_cov_5.807107_g86883_i0 | PRJNA641707 | 89546 | 246 | 5.807107 | 14.28548322 | Treponema sp. Marseille-Q4132 | 2766701 | Bacteria | Bacteria | 183 | 7.549999999999997e-42 | NTclustered | gi|1897717435|gb|CP060591.1| | 2766701 | g86883 | i0 | 100 | 16.6260162601626 | 99 | 0 | 80 | 0 | 148 | 246 | 1778931 | 1779029 | Treponema sp. Marseille-Q4132 chromosome | blastn | 4090 | 183 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema sp. Marseille-Q4132 | ||
| 7535681 | 7535681 | PRJNA641707_P_NODE_339746_length_150_cov_5.079208_g337083_i0 | PRJNA641707 | 339746 | 150 | 5.079208 | 7.618812 | Treponema | 157 | Bacteria | Bacteria | 252 | 1.12e-62 | NTclustered | gi|1807378492|gb|CP048020.1| | 69710 | g337083 | i0 | 97.931 | 9.64 | 145 | 3 | 97 | 0 | 6 | 150 | 2627199 | 2627055 | Treponema vincentii strain OMZ 804 chromosome, complete genome | blastn | 1446 | 252 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema vincentii | ||
| 7535877 | 7535877 | PRJNA641707_P_NODE_52646_length_296_cov_7.000000_g49987_i0 | PRJNA641707 | 52646 | 296 | 7 | 20.72 | Treponema | 157 | Bacteria | Bacteria | 272 | 1.94e-68 | NTclustered | gi|1996291085|gb|CP027017.1| | 58231 | g49987 | i0 | 99.333 | 98.597972972973 | 150 | 1 | 86 | 0 | 1 | 150 | 1015791 | 1015642 | Treponema medium strain T19 chromosome, complete genome | blastn | 29185 | 274 | 0.992700729927007 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema medium | ||
| 7536059 | 7536059 | PRJNA641707_P_NODE_72546_length_247_cov_5.505051_g69883_i0 | PRJNA641707 | 72546 | 247 | 5.505051 | 13.59747597 | Treponema | 157 | Bacteria | Bacteria | 172 | 1.64e-38 | NTclustered | gi|1807378492|gb|CP048020.1| | 69710 | g69883 | i0 | 97.98 | 3.11336032388664 | 99 | 2 | 79 | 0 | 149 | 247 | 2019803 | 2019705 | Treponema vincentii strain OMZ 804 chromosome, complete genome | blastn | 769 | 172 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema vincentii | ||
| 8266348 | 8266348 | PRJNA641707_P_NODE_199887_length_197_cov_8.594595_g197224_i0 | PRJNA641707 | 199887 | 197 | 8.594595 | 16.93135215 | Sphaerochaeta associata | 1129264 | Bacteria | Bacteria | 357 | 3.23e-94 | NTclustered | gi|2221097576|gb|CP094929.1| | 1129264 | g197224 | i0 | 100 | 206.888324873096 | 193 | 0 | 98 | 0 | 5 | 197 | 1402258 | 1402450 | Sphaerochaeta associata strain GLS2T chromosome, complete genome | blastn | 40757 | 357 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Sphaerochaetaceae | Sphaerochaeta | Sphaerochaeta associata | ||
| 8809410 | 8809410 | PRJNA641707_P_NODE_16947_length_528_cov_23.331942_g14544_i0 | PRJNA641707 | 16947 | 528 | 23.331942 | 123.19265376 | Treponema | 157 | Bacteria | Bacteria | 935 | 0 | NTclustered | gi|1807378492|gb|CP048020.1| | 69710 | g14544 | i0 | 98.855 | 193.878787878788 | 524 | 6 | 99 | 0 | 1 | 524 | 2079370 | 2079893 | Treponema vincentii strain OMZ 804 chromosome, complete genome | blastn | 102368 | 935 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema vincentii | ||
| 8809522 | 8809522 | PRJNA641707_P_NODE_183627_length_199_cov_13.333333_g180964_i0 | PRJNA641707 | 183627 | 199 | 13.333333 | 26.53333267 | Spirochaetales | 136 | Bacteria | Bacteria | 176 | 9.82e-40 | NTclustered | gi|2215077799|gb|ON138393.1| | 162155 | g180964 | i0 | 100 | 82.9547738693467 | 95 | 0 | 48 | 0 | 99 | 193 | 393 | 299 | Uncultured Treponema sp. clone DT10 23S ribosomal RNA gene, partial sequence | blastn | 16508 | 176 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | uncultured Treponema sp. | ||
| 8809948 | 8809948 | PRJNA641707_P_NODE_238587_length_187_cov_3.173913_g235924_i0 | PRJNA641707 | 238587 | 187 | 3.173913 | 5.93521731 | Brachyspira | 29521 | Bacteria | Bacteria | 52.8 | 0.016 | NTclustered | gi|2620040616|gb|CP104712.1| | 159 | g235924 | i0 | 100 | 0.299465240641711 | 28 | 0 | 15 | 0 | 49 | 76 | 501164 | 501137 | Brachyspira hyodysenteriae strain ZH1261 chromosome, complete genome | blastn | 56 | 52.8 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Brachyspirales | Brachyspiraceae | Brachyspira | Brachyspira hyodysenteriae | ||
| 8810579 | 8810579 | PRJNA641707_P_NODE_323867_length_156_cov_6.429907_g321204_i0 | PRJNA641707 | 323867 | 156 | 6.429907 | 10.03065492 | root | 1 | Root_unresolved | Root_unresolved | 228 | 1.9899999999999994e-55 | NTclustered | gi|2612877174|gb|CP136243.1| | 173 | g321204 | i0 | 93.548 | 189.237179487179 | 155 | 6 | 98 | 4 | 1 | 153 | 2714064 | 2714216 | Leptospira interrogans strain CUDO5 chromosome I, complete sequence | blastn | 29521 | 228 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Leptospirales | Leptospiraceae | Leptospira | Leptospira interrogans | ||
| 9541565 | 9541565 | PRJNA641707_P_NODE_200108_length_197_cov_8.121622_g197445_i0 | PRJNA641707 | 200108 | 197 | 8.121622 | 15.99959534 | Treponema denticola | 158 | Bacteria | Bacteria | 320 | 4.24e-83 | NTclustered | gi|2265172126|gb|CP051522.1| | 158 | g197445 | i0 | 96.859 | 12.5989847715736 | 191 | 6 | 97 | 0 | 1 | 191 | 1713231 | 1713041 | Treponema denticola strain OMZ 910 chromosome, complete genome | blastn | 2482 | 320 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema denticola | ||
| 9542473 | 9542473 | PRJNA641707_P_NODE_239068_length_186_cov_26.043796_g236405_i0 | PRJNA641707 | 239068 | 186 | 26.043796 | 48.44146056 | Leptospira sp. severe_002 | 2838237 | Bacteria | Bacteria | 244 | 2.44e-60 | NTclustered | gi|2120242214|gb|CP075692.1| | 2838237 | g236405 | i0 | 90.323 | 134.817204301075 | 186 | 18 | 100 | 0 | 1 | 186 | 256290 | 256475 | Leptospira sp. severe_002 chromosome 1 | blastn | 25076 | 244 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Leptospirales | Leptospiraceae | Leptospira | Leptospira sp. severe_002 | ||
| 9543503 | 9543503 | PRJNA641707_P_NODE_283948_length_169_cov_2.500000_g281285_i0 | PRJNA641707 | 283948 | 169 | 2.5 | 4.225 | Treponema denticola | 158 | Bacteria | Bacteria | 285 | 1.28e-72 | NTclustered | gi|2265199313|gb|CP058624.1| | 158 | g281285 | i0 | 98.16 | 23.0769230769231 | 163 | 3 | 96 | 0 | 2 | 164 | 781202 | 781364 | Treponema denticola strain OMZ 854 chromosome, complete genome | blastn | 3900 | 285 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema denticola | ||
| 9544382 | 9544382 | PRJNA641707_P_NODE_319348_length_158_cov_4.119266_g316685_i0 | PRJNA641707 | 319348 | 158 | 4.119266 | 6.50844028 | Entomospira entomophila | 2719988 | Bacteria | Bacteria | 213 | 5.66e-51 | NTclustered | gi|2446642546|gb|CP118174.1| | 2719988 | g316685 | i0 | 91.72 | 224.879746835443 | 157 | 8 | 97 | 5 | 1 | 154 | 329341 | 329495 | Entomospira entomophila strain BR193 chromosome | blastn | 35531 | 213 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Spirochaetaceae | Entomospira | Entomospira entomophila | ||
| 10084394 | 10084394 | PRJNA641707_P_NODE_10088_length_675_cov_44.800319_g8084_i0 | PRJNA641707 | 10088 | 675 | 44.800319 | 302.40215325 | Treponema | 157 | Bacteria | Bacteria | 1110 | 0 | NTclustered | gi|1996296230|gb|CP031393.1| | 58231 | g8084 | i0 | 96.439 | 193.925925925926 | 674 | 22 | 99 | 2 | 4 | 675 | 1679902 | 1680575 | Treponema medium strain ATCC 700293 chromosome, complete genome | blastn | 130900 | 1120 | 0.991071428571429 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema medium | ||
| 10084531 | 10084531 | PRJNA641707_P_NODE_113388_length_246_cov_2.385787_g110725_i0 | PRJNA641707 | 113388 | 246 | 2.385787 | 5.86903602 | Treponema | 157 | Bacteria | Bacteria | 161 | 3.54e-35 | NTclustered | gi|2265193197|gb|CP058347.1| | 158 | g110725 | i0 | 96.875 | 11.6016260162602 | 96 | 3 | 39 | 0 | 147 | 242 | 2719419 | 2719514 | Treponema denticola strain OKA3 chromosome, complete genome | blastn | 2854 | 161 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema denticola | ||
| 10084920 | 10084920 | PRJNA641707_P_NODE_156628_length_223_cov_5.022989_g153965_i0 | PRJNA641707 | 156628 | 223 | 5.022989 | 11.20126547 | Spirochaetia | 203692 | Bacteria | Bacteria | 209 | 1.11e-49 | NTclustered | gi|983169616|dbj|LC055458.1| | 159 | g153965 | i0 | 99.145 | 96.6412556053812 | 117 | 0 | 96 | 1 | 2 | 118 | 964 | 849 | Brachyspira hyodysenteriae gene for 16S ribosomal RNA, partial sequence, isolate: IBK44-1 | blastn | 21551 | 209 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Brachyspirales | Brachyspiraceae | Brachyspira | Brachyspira hyodysenteriae | ||
| 10085045 | 10085045 | PRJNA641707_P_NODE_16948_length_528_cov_22.876827_g14545_i0 | PRJNA641707 | 16948 | 528 | 22.876827 | 120.78964656 | Treponema | 157 | Bacteria | Bacteria | 941 | 0 | NTclustered | gi|1807378492|gb|CP048020.1| | 69710 | g14545 | i0 | 99.046 | 193.757575757576 | 524 | 5 | 99 | 0 | 5 | 528 | 2079893 | 2079370 | Treponema vincentii strain OMZ 804 chromosome, complete genome | blastn | 102304 | 941 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema vincentii | ||
| 10085505 | 10085505 | PRJNA641707_P_NODE_222688_length_192_cov_9.230769_g220025_i0 | PRJNA641707 | 222688 | 192 | 9.230769 | 17.72307648 | Treponema | 157 | Bacteria | Bacteria | 202 | 1.55e-47 | NTclustered | gi|719625061|gb|CP009227.1| | 1539298 | g220025 | i0 | 86.096 | 7.8125 | 187 | 26 | 97 | 0 | 6 | 192 | 1032621 | 1032807 | Treponema sp. OMZ 838, complete genome | blastn | 1500 | 202 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema sp. OMZ 838 | ||
| 10086099 | 10086099 | PRJNA641707_P_NODE_304588_length_163_cov_2.736842_g301925_i0 | PRJNA641707 | 304588 | 163 | 2.736842 | 4.46105246 | Gracilinema | 2951106 | Bacteria | Bacteria | 270 | 3.4499999999999993e-68 | NTclustered | gi|470488994|ref|NR_076899.1| | 215591 | g301925 | i0 | 97.468 | 180.024539877301 | 158 | 4 | 97 | 0 | 1 | 158 | 572 | 415 | Treponema caldarium strain H1 23S ribosomal RNA, complete sequence | blastn | 29344 | 270 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Breznakiellaceae | Gracilinema | Gracilinema caldarium | ||
| 10086505 | 10086505 | PRJNA641707_P_NODE_50148_length_304_cov_28.172549_g47490_i0 | PRJNA641707 | 50148 | 304 | 28.172549 | 85.64454896 | Treponema | 157 | Bacteria | Bacteria | 542 | 1.38e-149 | NTclustered | gi|2586373|gb|AF023050.1|AF023050 | 67503 | g47490 | i0 | 99.331 | 98.2993421052632 | 299 | 2 | 98 | 0 | 1 | 299 | 703 | 405 | Treponema sp. 9:A:D01 16S ribosomal RNA gene, complete sequence | blastn | 29883 | 547 | 0.990859232175503 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema sp. 9:A:D01 | ||
| 10818946 | 10818946 | PRJNA641707_P_NODE_274949_length_172_cov_5.373984_g272286_i0 | PRJNA641707 | 274949 | 172 | 5.373984 | 9.24325248 | Leptospira sp. 'Mane' | 3387407 | Bacteria | Bacteria | 191 | 2.93e-44 | NTclustered | gi|2889308543|gb|CP177134.1| | 3387407 | g272286 | i0 | 88.199 | 17.7093023255814 | 161 | 18 | 94 | 1 | 6 | 166 | 339068 | 338909 | Leptospira sp. 'Mane' chromosome 1, complete sequence | blastn | 3046 | 191 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Leptospirales | Leptospiraceae | Leptospira | Leptospira sp. 'Mane' | ||
| 10820115 | 10820115 | PRJNA641707_P_NODE_321249_length_157_cov_6.259259_g318586_i0 | PRJNA641707 | 321249 | 157 | 6.259259 | 9.82703663 | Marispirochaeta aestuarii | 1963862 | Bacteria | Bacteria | 193 | 7.32e-45 | NTclustered | gi|2621706252|emb|OY764158.1| | 1963862 | g318586 | i0 | 91.489 | 187.993630573248 | 141 | 11 | 89 | 1 | 4 | 143 | 599895 | 600035 | MAG: Marispirochaeta aestuarii isolate 3e1d039b-c9f6-42e3-8811-4df9f69fa931 genome assembly, chromosome: 1 | blastn | 29515 | 193 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Spirochaetaceae | Marispirochaeta | Marispirochaeta aestuarii | ||
| 10820703 | 10820703 | PRJNA641707_P_NODE_45869_length_320_cov_6.501845_g43218_i0 | PRJNA641707 | 45869 | 320 | 6.501845 | 20.805904 | Treponema putidum | 221027 | Bacteria | Bacteria | 195 | 4.71e-45 | NTclustered | gi|2277015157|gb|CP038803.1| | 221027 | g43218 | i0 | 84.974 | 2.4125 | 193 | 28 | 60 | 1 | 1 | 193 | 565395 | 565586 | Treponema putidum strain OMZ 846 chromosome, complete genome | blastn | 772 | 195 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema putidum | ||
| 11361074 | 11361074 | PRJNA641707_P_NODE_328949_length_154_cov_11.571429_g326286_i0 | PRJNA641707 | 328949 | 154 | 11.571429 | 17.82000066 | Treponema | 157 | Bacteria | Bacteria | 239 | 9.04e-59 | NTclustered | gi|470488561|ref|NR_076878.1| | 81028 | g326286 | i0 | 95.333 | 178.772727272727 | 150 | 7 | 97 | 0 | 1 | 150 | 1158 | 1009 | Treponema brennaborense strain DD5/3 23S ribosomal RNA gene, complete sequence | blastn | 27531 | 239 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema brennaborense | ||
| 11361083 | 11361083 | PRJNA641707_P_NODE_330809_length_154_cov_3.285714_g328146_i0 | PRJNA641707 | 330809 | 154 | 3.285714 | 5.05999956 | Thermospira | 3024226 | Bacteria | Bacteria | 178 | 2e-40 | NTclustered | gi|2242711866|gb|CP073355.1| | 2828656 | g328146 | i0 | 88 | 195.461038961039 | 150 | 18 | 97 | 0 | 1 | 150 | 945175 | 945026 | Thermospira aquatica strain F1F22 chromosome, complete genome | blastn | 30101 | 178 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Brevinematales | Thermospiraceae | Thermospira | Thermospira aquatica | ||
| 11361441 | 11361441 | PRJNA641707_P_NODE_58649_length_278_cov_9.161572_g55988_i0 | PRJNA641707 | 58649 | 278 | 9.161572 | 25.46917016 | Treponema | 157 | Bacteria | Bacteria | 363 | 1.0399999999999999e-95 | NTclustered | gi|1868715119|emb|LR796240.1| | 69713 | g55988 | i0 | 96.789 | 115.971223021583 | 218 | 5 | 78 | 2 | 62 | 278 | 1599189 | 1598973 | Treponema socranskii subsp. buccale strain Marseille-CSURQ0203 genome assembly, chromosome: contig00001 | blastn | 32240 | 363 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema socranskii | ||
| 11361506 | 11361506 | PRJNA641707_P_NODE_66169_length_259_cov_7.609524_g63506_i0 | PRJNA641707 | 66169 | 259 | 7.609524 | 19.70866716 | Spirochaetales | 136 | Bacteria | Bacteria | 124 | 4.9299999999999996e-24 | NTclustered | gi|470488994|ref|NR_076899.1| | 215591 | g63506 | i0 | 90.426 | 71.4401544401544 | 94 | 9 | 36 | 0 | 6 | 99 | 1139 | 1232 | Treponema caldarium strain H1 23S ribosomal RNA, complete sequence | blastn | 18503 | 124 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Breznakiellaceae | Gracilinema | Gracilinema caldarium | ||
| 11361548 | 11361548 | PRJNA641707_P_NODE_71269_length_248_cov_4.547739_g68606_i0 | PRJNA641707 | 71269 | 248 | 4.547739 | 11.27839272 | Treponema | 157 | Bacteria | Bacteria | 446 | 8.81e-121 | NTclustered | gi|285184826|gb|GU420699.1| | 51160 | g68606 | i0 | 100 | 97.2177419354839 | 241 | 0 | 97 | 0 | 3 | 243 | 754 | 514 | Treponema maltophilum clone _C006 16S ribosomal RNA gene, partial sequence | blastn | 24110 | 446 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema maltophilum | ||
| 12092215 | 12092215 | PRJNA641707_P_NODE_18730_length_504_cov_8.872527_g16260_i0 | PRJNA641707 | 18730 | 504 | 8.872527 | 44.71753608 | Treponema vincentii | 69710 | Bacteria | Bacteria | 278 | 7.470000000000001e-70 | NTclustered | gi|2265115921|gb|CP051153.1| | 69710 | g16260 | i0 | 95.93 | 73.2539682539683 | 172 | 5 | 65 | 2 | 175 | 346 | 351663 | 351494 | Treponema vincentii strain OMZ 862 chromosome, complete genome | blastn | 36920 | 278 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema vincentii | ||
| 12092642 | 12092642 | PRJNA641707_P_NODE_206170_length_196_cov_7.204082_g203507_i0 | PRJNA641707 | 206170 | 196 | 7.204082 | 14.12000072 | Borreliella yangtzensis | 683292 | Bacteria | Bacteria | 248 | 2.0099999999999997e-61 | NTclustered | gi|2537402767|gb|CP124006.1| | 683292 | g203507 | i0 | 90.86 | 159.581632653061 | 186 | 15 | 94 | 2 | 2 | 186 | 439506 | 439690 | Borreliella yangtzensis strain Miyako4E3 chromosome, complete genome | blastn | 31278 | 248 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Borreliaceae | Borreliella | Borreliella yangtzensis | ||
| 12093821 | 12093821 | PRJNA641707_P_NODE_25850_length_427_cov_11.087302_g23261_i0 | PRJNA641707 | 25850 | 427 | 11.087302 | 47.34277954 | Treponema sp. | 166 | Bacteria | Bacteria | 294 | 6.2e-75 | NTclustered | gi|2189480979|gb|CP091737.1| | 166 | g23261 | i0 | 92.647 | 221.400468384075 | 204 | 15 | 92 | 0 | 1 | 204 | 341 | 544 | MAG: Treponema sp. isolate nC27_bin.160.fa chromosome | blastn | 94538 | 294 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema sp. | ||
| 12094409 | 12094409 | PRJNA641707_P_NODE_283790_length_169_cov_2.891667_g281127_i0 | PRJNA641707 | 283790 | 169 | 2.891667 | 4.88691723 | Treponema medium | 58231 | Bacteria | Bacteria | 294 | 2.12e-75 | NTclustered | gi|1996291085|gb|CP027017.1| | 58231 | g281127 | i0 | 99.383 | 10.0473372781065 | 162 | 1 | 96 | 0 | 2 | 163 | 5038 | 4877 | Treponema medium strain T19 chromosome, complete genome | blastn | 1698 | 294 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema medium | ||
| 12095736 | 12095736 | PRJNA641707_P_NODE_38550_length_350_cov_10.182724_g35910_i0 | PRJNA641707 | 38550 | 350 | 10.182724 | 35.639534 | uncultured Sphaerochaeta sp. | 886478 | Bacteria | Bacteria | 490 | 5.91e-134 | NTclustered | gi|2621705266|emb|OY763408.1| | 886478 | g35910 | i0 | 92.878 | 259.882857142857 | 337 | 24 | 96 | 0 | 7 | 343 | 1574870 | 1575206 | MAG: uncultured Sphaerochaeta sp. isolate a535b126-96cf-44a5-a161-074881f659df genome assembly, chromosome: 1 | blastn | 90959 | 490 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Sphaerochaetaceae | Sphaerochaeta | uncultured Sphaerochaeta sp. | ||
| 12095868 | 12095868 | PRJNA641707_P_NODE_44050_length_327_cov_8.280576_g41401_i0 | PRJNA641707 | 44050 | 327 | 8.280576 | 27.07748352 | Treponema parvum | 138851 | Bacteria | Bacteria | 291 | 5.99e-74 | NTclustered | gi|2023444933|gb|CP054257.1| | 138851 | g41401 | i0 | 91.163 | 124.990825688073 | 215 | 18 | 66 | 1 | 110 | 324 | 1516963 | 1517176 | Treponema parvum strain ATCC 700773 chromosome, complete genome | blastn | 40872 | 291 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema parvum | ||
| 12637137 | 12637137 | PRJNA641707_P_NODE_58490_length_279_cov_3.195652_g55829_i0 | PRJNA641707 | 58490 | 279 | 3.195652 | 8.91586908 | Brachyspira | 29521 | Bacteria | Bacteria | 237 | 6.61e-58 | NTclustered | gi|2021755399|gb|CP046930.1| | 159 | g55829 | i0 | 99.237 | 69.4193548387097 | 131 | 1 | 80 | 0 | 4 | 134 | 1298979 | 1299109 | Brachyspira hyodysenteriae strain BHZ375 chromosome, complete genome | blastn | 19368 | 239 | 0.99163179916318 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Brachyspirales | Brachyspiraceae | Brachyspira | Brachyspira hyodysenteriae | ||
| 12637177 | 12637177 | PRJNA641707_P_NODE_62110_length_269_cov_7.250000_g59449_i0 | PRJNA641707 | 62110 | 269 | 7.25 | 19.5025 | Treponema | 157 | Bacteria | Bacteria | 250 | 8.14e-62 | NTclustered | gi|2265187740|gb|CP054258.1| | 69713 | g59449 | i0 | 94.444 | 5.73234200743494 | 162 | 9 | 96 | 0 | 108 | 269 | 1865120 | 1865281 | Treponema socranskii subsp. buccale strain ATCC 35534 chromosome, complete genome | blastn | 1542 | 250 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema socranskii | ||
| 13367557 | 13367557 | PRJNA641707_P_NODE_215891_length_194_cov_6.724138_g213228_i0 | PRJNA641707 | 215891 | 194 | 6.724138 | 13.04482772 | Salinispira pacifica | 1307761 | Bacteria | Bacteria | 139 | 1.25e-28 | NTclustered | gi|565679415|gb|CP006939.1| | 1307761 | g213228 | i0 | 81.095 | 62.1494845360825 | 201 | 15 | 92 | 1 | 8 | 185 | 384915 | 385115 | Salinispira pacifica strain L21-RPul-D2, complete genome | blastn | 12057 | 139 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Spirochaetaceae | Salinispira | Salinispira pacifica | ||
| 13367626 | 13367626 | PRJNA641707_P_NODE_218791_length_193_cov_10.513889_g216128_i0 | PRJNA641707 | 218791 | 193 | 10.513889 | 20.29180577 | Thermospira aquatica | 2828656 | Bacteria | Bacteria | 71.3 | 4.59e-8 | NTclustered | gi|2242711866|gb|CP073355.1| | 2828656 | g216128 | i0 | 89.286 | 0.290155440414508 | 56 | 6 | 29 | 0 | 18 | 73 | 854304 | 854359 | Thermospira aquatica strain F1F22 chromosome, complete genome | blastn | 56 | 71.3 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Brevinematales | Thermospiraceae | Thermospira | Thermospira aquatica | ||
| 13368309 | 13368309 | PRJNA641707_P_NODE_248431_length_183_cov_2.798507_g245768_i0 | PRJNA641707 | 248431 | 183 | 2.798507 | 5.12126781 | Brevinematales bacterium NS | 2979017 | Bacteria | Bacteria | 163 | 6.899999999999999e-36 | NTclustered | gi|2305034691|gb|CP053071.1| | 2979017 | g245768 | i0 | 84.444 | 3.92349726775956 | 180 | 12 | 97 | 13 | 6 | 183 | 669408 | 669243 | Brevinematales bacterium NS chromosome, complete genome | blastn | 718 | 163 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Brevinematales | Brevinematales bacterium NS | ||||
| 13368416 | 13368416 | PRJNA641707_P_NODE_254011_length_180_cov_9.557252_g251348_i0 | PRJNA641707 | 254011 | 180 | 9.557252 | 17.2030536 | Spirochaetia bacterium | 2053615 | Bacteria | Bacteria | 139 | 1.14e-28 | NTclustered | gi|2907625707|emb|OZ223267.1| | 2053615 | g251348 | i0 | 89.815 | 232.683333333333 | 108 | 11 | 60 | 0 | 53 | 160 | 193979 | 193872 | MAG: Spirochaetia bacterium isolate 50ab941f-e521-41e2-bb97-00a459704a5b genome assembly, chromosome: 4 | blastn | 41883 | 139 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetia bacterium | |||||
| 13368915 | 13368915 | PRJNA641707_P_NODE_27691_length_412_cov_5.837466_g25096_i0 | PRJNA641707 | 27691 | 412 | 5.837466 | 24.050359919999998 | uncultured Treponema sp. | 162155 | Bacteria | Bacteria | 370 | 9.62e-98 | NTclustered | gi|375244383|gb|JQ654109.1| | 162155 | g25096 | i0 | 98.571 | 87.5412621359223 | 210 | 2 | 64 | 1 | 112 | 320 | 594 | 385 | Uncultured Treponema sp. clone 6:1H47 16S ribosomal RNA gene, partial sequence | blastn | 36067 | 370 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | uncultured Treponema sp. | ||
| 13371660 | 13371660 | PRJNA641707_P_NODE_94631_length_246_cov_4.989848_g91968_i0 | PRJNA641707 | 94631 | 246 | 4.989848 | 12.27502608 | uncultured Sphaerochaeta sp. | 886478 | Bacteria | Bacteria | 169 | 2.11e-37 | NTclustered | gi|2591539537|gb|OR657487.1| | 886478 | g91968 | i0 | 97.938 | 65.9471544715447 | 97 | 2 | 39 | 0 | 6 | 102 | 328 | 424 | Uncultured Sphaerochaeta sp. clone CH2 PE 439 16S ribosomal RNA gene, partial sequence | blastn | 16223 | 169 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Sphaerochaetaceae | Sphaerochaeta | uncultured Sphaerochaeta sp. | ||
| 13911721 | 13911721 | PRJNA641707_P_NODE_332611_length_153_cov_5.259615_g329948_i0 | PRJNA641707 | 332611 | 153 | 5.259615 | 8.04721095 | Treponema | 157 | Bacteria | Bacteria | 172 | 9.22e-39 | NTclustered | gi|2265148008|gb|CP051201.1| | 2563665 | g329948 | i0 | 88.652 | 178.679738562092 | 141 | 16 | 92 | 0 | 1 | 141 | 2473646 | 2473786 | Treponema sp. OMZ 790 chromosome, complete genome | blastn | 27338 | 172 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema sp. OMZ 790 | ||
| 13911822 | 13911822 | PRJNA641707_P_NODE_37831_length_353_cov_44.161184_g35192_i0 | PRJNA641707 | 37831 | 353 | 44.161184 | 155.88897952 | Treponema | 157 | Bacteria | Bacteria | 568 | 2.679999999999999e-157 | NTclustered | gi|1807378492|gb|CP048020.1| | 69710 | g35192 | i0 | 98.16 | 94.7677053824363 | 326 | 5 | 92 | 1 | 28 | 353 | 2742047 | 2741723 | Treponema vincentii strain OMZ 804 chromosome, complete genome | blastn | 33453 | 568 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema vincentii | ||
| 14644220 | 14644220 | PRJNA641707_P_NODE_297772_length_165_cov_1.974138_g295109_i0 | PRJNA641707 | 297772 | 165 | 1.974138 | 3.2573277 | uncultured Leptonema sp. | 385247 | Bacteria | Bacteria | 134 | 4.7900000000000005e-27 | NTclustered | gi|1899225135|gb|MT967607.1| | 385247 | g295109 | i0 | 86.4 | 178.430303030303 | 125 | 13 | 75 | 4 | 4 | 126 | 1889 | 2011 | Uncultured Leptonema sp. clone asv_106_2346 16S ribosomal RNA gene, partial sequence; 16S-23S ribosomal RNA intergenic spacer, complete sequence; and 23S ribosomal RNA gene, partial sequence | blastn | 29441 | 134 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Leptospirales | Leptospiraceae | Leptonema | uncultured Leptonema sp. | ||
| 15185086 | 15185086 | PRJNA641707_P_NODE_183152_length_199_cov_17.460000_g180489_i0 | PRJNA641707 | 183152 | 199 | 17.46 | 34.7454 | Entomospira | 2834378 | Bacteria | Bacteria | 206 | 1.25e-48 | NTclustered | gi|2446641004|gb|CP118168.1| | 2719987 | g180489 | i0 | 85.859 | 358.72864321608 | 198 | 22 | 97 | 6 | 1 | 194 | 324761 | 324956 | Entomospira nematocerorum strain BR208 chromosome | blastn | 71387 | 206 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Spirochaetaceae | Entomospira | Entomospira nematocerorum | ||
| 15914467 | 15914467 | PRJNA641707_P_NODE_135593_length_243_cov_4.195876_g132930_i0 | PRJNA641707 | 135593 | 243 | 4.195876 | 10.19597868 | Treponema socranskii | 53419 | Bacteria | Bacteria | 399 | 6.789999999999999e-107 | NTclustered | gi|2265187740|gb|CP054258.1| | 69713 | g132930 | i0 | 97.046 | 30.4444444444444 | 237 | 7 | 98 | 0 | 1 | 237 | 908270 | 908034 | Treponema socranskii subsp. buccale strain ATCC 35534 chromosome, complete genome | blastn | 7398 | 399 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema socranskii | ||
| 15915122 | 15915122 | PRJNA641707_P_NODE_165213_length_203_cov_10.025974_g162550_i0 | PRJNA641707 | 165213 | 203 | 10.025974 | 20.35272722 | Treponema sp. feline oral taxon 143 | 1577410 | Bacteria | Bacteria | 363 | 7.1999999999999985e-96 | NTclustered | gi|728055961|gb|KM462119.1| | 1577410 | g162550 | i0 | 99.497 | 97.320197044335 | 199 | 1 | 98 | 0 | 1 | 199 | 1417 | 1219 | Treponema sp. feline oral taxon 143 clone TL111 16S ribosomal RNA gene, partial sequence | blastn | 19756 | 363 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema sp. feline oral taxon 143 | ||
| 15916337 | 15916337 | PRJNA641707_P_NODE_219753_length_193_cov_7.069444_g217090_i0 | PRJNA641707 | 219753 | 193 | 7.069444 | 13.64402692 | Treponema sp. | 166 | Bacteria | Bacteria | 257 | 3.29e-64 | NTclustered | gi|2189480979|gb|CP091737.1| | 166 | g217090 | i0 | 91.444 | 99.1139896373057 | 187 | 16 | 97 | 0 | 2 | 188 | 1476139 | 1476325 | MAG: Treponema sp. isolate nC27_bin.160.fa chromosome | blastn | 19129 | 257 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema sp. | ||
| 15917224 | 15917224 | PRJNA641707_P_NODE_256733_length_179_cov_7.238462_g254070_i0 | PRJNA641707 | 256733 | 179 | 7.238462 | 12.95684698 | Spirochaeta aurantia | 147 | Bacteria | Bacteria | 294 | 2.28e-75 | NTclustered | gi|47779237|gb|AY599019.1| | 555314 | g254070 | i0 | 97.126 | 31.2905027932961 | 174 | 5 | 97 | 0 | 4 | 177 | 2627 | 2800 | Spirochaeta aurantia strain M1 16S ribosomal RNA, tRNA-Ile, 23S ribosomal RNA, and 5S ribosomal RNA genes, complete sequence | blastn | 5601 | 294 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Spirochaetaceae | Spirochaeta | Spirochaeta aurantia | ||
| 16460263 | 16460263 | PRJNA641707_P_NODE_296573_length_165_cov_4.508621_g293910_i0 | PRJNA641707 | 296573 | 165 | 4.508621 | 7.43922465 | Gracilinema | 2951106 | Bacteria | Bacteria | 172 | 1.02e-38 | NTclustered | gi|470488994|ref|NR_076899.1| | 215591 | g293910 | i0 | 97.98 | 117.448484848485 | 99 | 2 | 60 | 0 | 1 | 99 | 1104 | 1006 | Treponema caldarium strain H1 23S ribosomal RNA, complete sequence | blastn | 19379 | 172 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Breznakiellaceae | Gracilinema | Gracilinema caldarium | ||
| 17189244 | 17189244 | PRJNA641707_P_NODE_122314_length_245_cov_5.841837_g119651_i0 | PRJNA641707 | 122314 | 245 | 5.841837 | 14.31250065 | Brachyspira murdochii | 84378 | Bacteria | Bacteria | 86.1 | 2.18e-12 | NTclustered | gi|296016874|gb|CP001959.1| | 526224 | g119651 | i0 | 83.158 | 1.38367346938776 | 95 | 14 | 38 | 1 | 153 | 245 | 2484736 | 2484642 | Brachyspira murdochii DSM 12563, complete genome | blastn | 339 | 86.1 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Brachyspirales | Brachyspiraceae | Brachyspira | Brachyspira murdochii | ||
| 17189855 | 17189855 | PRJNA641707_P_NODE_149814_length_237_cov_8.462766_g147151_i0 | PRJNA641707 | 149814 | 237 | 8.462766 | 20.056755419999998 | Spirochaetota bacterium | 2202144 | Bacteria | Bacteria | 110 | 1.24e-19 | NTclustered | gi|2649718696|emb|OZ001226.1| | 2202144 | g147151 | i0 | 92.208 | 115.337552742616 | 77 | 6 | 32 | 0 | 18 | 94 | 73210 | 73134 | MAG: Spirochaetota bacterium isolate 8b34eeeb-0c33-43c6-8155-d1d64b2f6b4c genome assembly, chromosome: 19 | blastn | 27335 | 110 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetota bacterium | ||||||
| 17190810 | 17190810 | PRJNA641707_P_NODE_193894_length_198_cov_7.630872_g191231_i0 | PRJNA641707 | 193894 | 198 | 7.630872 | 15.10912656 | Spirochaetota bacterium | 2202144 | Bacteria | Bacteria | 263 | 7.28e-66 | NTclustered | gi|2621703426|emb|OY760686.1| | 2202144 | g191231 | i0 | 91.192 | 134.550505050505 | 193 | 17 | 97 | 0 | 5 | 197 | 1986 | 1794 | MAG: Spirochaetota bacterium isolate b615e79e-4617-45ea-95f9-f7a736470f88 genome assembly, chromosome: 1 | blastn | 26641 | 263 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetota bacterium | ||||||
| 17193843 | 17193843 | PRJNA641707_P_NODE_3254_length_1106_cov_33.261116_g2198_i1 | PRJNA641707 | 3254 | 1106 | 33.261116 | 367.86794296 | Treponema bryantii | 163 | Bacteria | Bacteria | 1580 | 0 | NTclustered | gi|2581915939|dbj|AP025286.1| | 163 | g2198 | i1 | 92.489 | 175.597649186257 | 1105 | 82 | 99 | 1 | 2 | 1105 | 704725 | 703621 | Treponema bryantii JCM 32280 DNA, complete genome | blastn | 194211 | 1580 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema bryantii | ||
| 17734646 | 17734646 | PRJNA641707_P_NODE_201734_length_197_cov_5.479730_g199071_i0 | PRJNA641707 | 201734 | 197 | 5.47973 | 10.7950681 | Turneriella | 338321 | Bacteria | Bacteria | 326 | 9.1e-85 | NTclustered | gi|470489162|ref|NR_076910.1| | 29510 | g199071 | i0 | 96.447 | 418.979695431472 | 197 | 7 | 100 | 0 | 1 | 197 | 662 | 466 | Turneriella parva strain DSM 21527 23S ribosomal RNA gene, complete sequence | blastn | 82539 | 326 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Leptospirales | Leptospiraceae | Turneriella | Turneriella parva | ||
| 17735117 | 17735117 | PRJNA641707_P_NODE_261074_length_177_cov_60.414062_g258411_i0 | PRJNA641707 | 261074 | 177 | 60.414062 | 106.93288974 | Treponema | 157 | Bacteria | Bacteria | 316 | 4.799999999999999e-82 | NTclustered | gi|379647715|gb|JF700258.1| | 158 | g258411 | i0 | 98.87 | 123.005649717514 | 177 | 2 | 100 | 0 | 1 | 177 | 1345 | 1169 | Treponema denticola strain ATCC 700768 16S ribosomal RNA gene, partial sequence | blastn | 21772 | 316 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema denticola | ||
| 17736007 | 17736007 | PRJNA641707_P_NODE_63854_length_265_cov_4.125000_g61193_i0 | PRJNA641707 | 63854 | 265 | 4.125 | 10.93125 | Sphaerochaeta | 399320 | Bacteria | Bacteria | 340 | 4.62e-89 | NTclustered | gi|359350094|gb|CP003155.1| | 158190 | g61193 | i0 | 91.2 | 301.116981132075 | 250 | 22 | 94 | 0 | 11 | 260 | 664713 | 664962 | Sphaerochaeta pleomorpha str. Grapes, complete genome | blastn | 79796 | 340 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Sphaerochaetaceae | Sphaerochaeta | Sphaerochaeta pleomorpha | ||
| 18465057 | 18465057 | PRJNA641707_P_NODE_195235_length_198_cov_5.892617_g192572_i0 | PRJNA641707 | 195235 | 198 | 5.892617 | 11.66738166 | Treponema socranskii | 53419 | Bacteria | Bacteria | 165 | 2.11e-36 | NTclustered | gi|2265187740|gb|CP054258.1| | 69713 | g192572 | i0 | 98.913 | 100.156565656566 | 92 | 1 | 46 | 0 | 102 | 193 | 909328 | 909237 | Treponema socranskii subsp. buccale strain ATCC 35534 chromosome, complete genome | blastn | 19831 | 165 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema socranskii | ||
| 19009130 | 19009130 | PRJNA641707_P_NODE_313055_length_160_cov_7.162162_g310392_i0 | PRJNA641707 | 313055 | 160 | 7.162162 | 11.4594592 | Sphaerochaeta | 399320 | Bacteria | Bacteria | 213 | 5.75e-51 | NTclustered | gi|324025087|gb|CP002541.1| | 158189 | g310392 | i0 | 90.625 | 178.4875 | 160 | 15 | 100 | 0 | 1 | 160 | 1242277 | 1242436 | Sphaerochaeta globosa str. Buddy, complete genome | blastn | 28558 | 213 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Sphaerochaetaceae | Sphaerochaeta | Sphaerochaeta globosa | ||
| 19009856 | 19009856 | PRJNA641707_P_NODE_95335_length_246_cov_4.883249_g92672_i0 | PRJNA641707 | 95335 | 246 | 4.883249 | 12.01279254 | Bacteria | 2 | Bacteria | Bacteria | 154 | 5.9200000000000005e-33 | NTclustered | gi|1732601887|gb|CP042818.1| | 162 | g92672 | i0 | 94.898 | 7.40650406504065 | 98 | 5 | 78 | 0 | 147 | 244 | 1600426 | 1600523 | Treponema phagedenis strain B43.1 chromosome, complete genome | blastn | 1822 | 154 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema phagedenis | ||
| 19741451 | 19741451 | PRJNA641707_P_NODE_267996_length_175_cov_3.611111_g265333_i0 | PRJNA641707 | 267996 | 175 | 3.611111 | 6.31944425 | uncultured Treponema sp. | 162155 | Bacteria | Bacteria | 309 | 7.920000000000001e-80 | NTclustered | gi|1826584143|gb|MT257087.1| | 162155 | g265333 | i0 | 100 | 28.3142857142857 | 167 | 0 | 95 | 0 | 7 | 173 | 157 | 323 | Uncultured Treponema sp. clone Mbo017R1_RC 23S ribosomal RNA gene, partial sequence | blastn | 4955 | 309 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | uncultured Treponema sp. | ||
| 19742539 | 19742539 | PRJNA641707_P_NODE_3136_length_1123_cov_56.205773_g2198_i0 | PRJNA641707 | 3136 | 1123 | 56.205773 | 631.19083079 | Treponema denticola | 158 | Bacteria | Bacteria | 1578 | 0 | NTclustered | gi|2265199313|gb|CP058624.1| | 158 | g2198 | i0 | 92.089 | 191.548530721282 | 1125 | 82 | 99 | 7 | 1 | 1122 | 1583026 | 1584146 | Treponema denticola strain OMZ 854 chromosome, complete genome | blastn | 215109 | 1578 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema denticola | ||
| 19743836 | 19743836 | PRJNA641707_P_NODE_67376_length_256_cov_11.188406_g64713_i0 | PRJNA641707 | 67376 | 256 | 11.188406 | 28.64231936 | Treponema vincentii | 69710 | Bacteria | Bacteria | 309 | 1.25e-79 | NTclustered | gi|1807378492|gb|CP048020.1| | 69710 | g64713 | i0 | 87.698 | 160.25390625 | 252 | 27 | 98 | 2 | 1 | 251 | 2079644 | 2079892 | Treponema vincentii strain OMZ 804 chromosome, complete genome | blastn | 41025 | 309 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema vincentii | ||
| 19744477 | 19744477 | PRJNA641707_P_NODE_95496_length_246_cov_4.857868_g92833_i0 | PRJNA641707 | 95496 | 246 | 4.857868 | 11.95035528 | Sphaerochaetaceae bacterium | 2791017 | Bacteria | Bacteria | 119 | 2.16e-22 | NTclustered | gi|2621786375|emb|OY782833.1| | 2791017 | g92833 | i0 | 89 | 118.552845528455 | 100 | 6 | 39 | 5 | 6 | 101 | 812981 | 812883 | MAG: Sphaerochaetaceae bacterium isolate 4316afa4-75a5-40cd-90fd-6a37d92e054f genome assembly, chromosome: 1 | blastn | 29164 | 119 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Sphaerochaetaceae | Sphaerochaetaceae bacterium | |||
| 20283896 | 20283896 | PRJNA641707_P_NODE_296396_length_165_cov_4.948276_g293733_i0 | PRJNA641707 | 296396 | 165 | 4.948276 | 8.1646554 | Brucepastera | 2967962 | Bacteria | Bacteria | 228 | 2.139999999999999e-55 | NTclustered | gi|2814788384|emb|OY762953.2| | 2854022 | g293733 | i0 | 92.453 | 181.472727272727 | 159 | 12 | 96 | 0 | 5 | 163 | 1491713 | 1491871 | MAG: Treponemataceae bacterium isolate a6accef0-0fd1-414a-935d-742eec6b5613 genome assembly, chromosome: 1 | blastn | 29943 | 228 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponemataceae bacterium | |||
| 21014898 | 21014898 | PRJNA641707_P_NODE_17637_length_518_cov_9.501066_g15211_i0 | PRJNA641707 | 17637 | 518 | 9.501066 | 49.21552188 | Treponema bryantii | 163 | Bacteria | Bacteria | 560 | 6.82e-155 | NTclustered | gi|2581915939|dbj|AP025286.1| | 163 | g15211 | i0 | 86.513 | 185.30694980695 | 519 | 59 | 99 | 10 | 6 | 518 | 1346503 | 1347016 | Treponema bryantii JCM 32280 DNA, complete genome | blastn | 95989 | 560 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema bryantii | ||
| 21015697 | 21015697 | PRJNA641707_P_NODE_213177_length_195_cov_3.335616_g210514_i0 | PRJNA641707 | 213177 | 195 | 3.335616 | 6.5044512 | Spirochaetia bacterium | 2053615 | Bacteria | Bacteria | 58.4 | 3.62e-4 | NTclustered | gi|2621785583|emb|OY782041.1| | 2053615 | g210514 | i0 | 100 | 0.753846153846154 | 31 | 0 | 16 | 0 | 10 | 40 | 3838351 | 3838381 | MAG: Spirochaetia bacterium isolate d8b3d310-4ac7-4817-9bde-c02243007ba8 genome assembly, chromosome: 1 | blastn | 147 | 58.4 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetia bacterium | |||||
| 22288360 | 22288360 | PRJNA641707_P_NODE_122658_length_245_cov_5.596939_g119995_i0 | PRJNA641707 | 122658 | 245 | 5.596939 | 13.71250055 | Treponema denticola | 158 | Bacteria | Bacteria | 171 | 5.85e-38 | NTclustered | gi|2265163189|gb|CP051302.1| | 158 | g119995 | i0 | 97.959 | 18.5714285714286 | 98 | 2 | 77 | 0 | 1 | 98 | 1380352 | 1380449 | Treponema denticola strain OMZ 853 chromosome, complete genome | blastn | 4550 | 171 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema denticola | ||
| 22288472 | 22288472 | PRJNA641707_P_NODE_12778_length_604_cov_83.360360_g10588_i0 | PRJNA641707 | 12778 | 604 | 83.36036 | 503.4965744 | Treponema denticola | 158 | Bacteria | Bacteria | 1042 | 0 | NTclustered | gi|2265172126|gb|CP051522.1| | 158 | g10588 | i0 | 98.164 | 182.807947019868 | 599 | 8 | 99 | 2 | 6 | 604 | 513312 | 513907 | Treponema denticola strain OMZ 910 chromosome, complete genome | blastn | 110416 | 1042 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema denticola | ||
| 22291757 | 22291757 | PRJNA641707_P_NODE_271538_length_173_cov_11.580645_g268875_i0 | PRJNA641707 | 271538 | 173 | 11.580645 | 20.03451585 | Leptospira sp. severe_002 | 2838237 | Bacteria | Bacteria | 278 | 2.2e-70 | NTclustered | gi|2120242214|gb|CP075692.1| | 2838237 | g268875 | i0 | 96.429 | 150.537572254335 | 168 | 6 | 97 | 0 | 1 | 168 | 255314 | 255481 | Leptospira sp. severe_002 chromosome 1 | blastn | 26043 | 278 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Leptospirales | Leptospiraceae | Leptospira | Leptospira sp. severe_002 | ||
| 22292025 | 22292025 | PRJNA641707_P_NODE_283338_length_169_cov_4.041667_g280675_i0 | PRJNA641707 | 283338 | 169 | 4.041667 | 6.83041723 | Treponema sp. Marseille-Q4132 | 2766701 | Bacteria | Bacteria | 287 | 3.55e-73 | NTclustered | gi|1897717435|gb|CP060591.1| | 2766701 | g280675 | i0 | 98.171 | 175.89349112426 | 164 | 3 | 97 | 0 | 1 | 164 | 2590679 | 2590516 | Treponema sp. Marseille-Q4132 chromosome | blastn | 29726 | 287 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema sp. Marseille-Q4132 | ||
| 22293020 | 22293020 | PRJNA641707_P_NODE_32438_length_380_cov_6.199396_g29824_i0 | PRJNA641707 | 32438 | 380 | 6.199396 | 23.5577048 | Salinispira pacifica | 1307761 | Bacteria | Bacteria | 191 | 7.36e-44 | NTclustered | gi|565679415|gb|CP006939.1| | 1307761 | g29824 | i0 | 95.763 | 48.1342105263158 | 118 | 5 | 31 | 0 | 6 | 123 | 385013 | 384896 | Salinispira pacifica strain L21-RPul-D2, complete genome | blastn | 18291 | 191 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Spirochaetaceae | Salinispira | Salinispira pacifica | ||
| 22294114 | 22294114 | PRJNA641707_P_NODE_68198_length_254_cov_13.736585_g65535_i0 | PRJNA641707 | 68198 | 254 | 13.736585 | 34.8909259 | uncultured Treponema sp. | 162155 | Bacteria | Bacteria | 193 | 1.3e-44 | NTclustered | gi|2215077804|gb|ON138398.1| | 162155 | g65535 | i0 | 86.188 | 73.0354330708661 | 181 | 22 | 71 | 3 | 4 | 183 | 372 | 194 | Uncultured Treponema sp. clone DT18 23S ribosomal RNA gene, partial sequence | blastn | 18551 | 193 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | uncultured Treponema sp. | ||
| 22834638 | 22834638 | PRJNA641707_P_NODE_264278_length_176_cov_7.511811_g261615_i0 | PRJNA641707 | 264278 | 176 | 7.511811 | 13.22078736 | Treponema | 157 | Bacteria | Bacteria | 222 | 1.0699999999999999e-53 | NTclustered | gi|470488561|ref|NR_076878.1| | 81028 | g261615 | i0 | 90.058 | 190.431818181818 | 171 | 17 | 97 | 0 | 5 | 175 | 2331 | 2501 | Treponema brennaborense strain DD5/3 23S ribosomal RNA gene, complete sequence | blastn | 33516 | 222 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema brennaborense | ||
| 22835121 | 22835121 | PRJNA641707_P_NODE_327638_length_155_cov_3.849057_g324975_i0 | PRJNA641707 | 327638 | 155 | 3.849057 | 5.96603835 | Turneriella | 338321 | Bacteria | Bacteria | 233 | 4.24e-57 | NTclustered | gi|470489162|ref|NR_076910.1| | 29510 | g324975 | i0 | 94.702 | 309.4 | 151 | 7 | 97 | 1 | 1 | 150 | 717 | 567 | Turneriella parva strain DSM 21527 23S ribosomal RNA gene, complete sequence | blastn | 47957 | 233 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Leptospirales | Leptospiraceae | Turneriella | Turneriella parva | ||
| 23567216 | 23567216 | PRJNA641707_P_NODE_265979_length_176_cov_1.921260_g263316_i0 | PRJNA641707 | 265979 | 176 | 1.92126 | 3.3814176 | Treponema denticola | 158 | Bacteria | Bacteria | 189 | 1.08e-43 | NTclustered | gi|2265172126|gb|CP051522.1| | 158 | g263316 | i0 | 94.355 | 2.46022727272727 | 124 | 6 | 70 | 1 | 3 | 126 | 1416671 | 1416793 | Treponema denticola strain OMZ 910 chromosome, complete genome | blastn | 433 | 189 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema denticola | ||
| 23568019 | 23568019 | PRJNA641707_P_NODE_299119_length_164_cov_9.226087_g296456_i0 | PRJNA641707 | 299119 | 164 | 9.226087 | 15.13078268 | Treponema socranskii | 53419 | Bacteria | Bacteria | 285 | 1.24e-72 | NTclustered | gi|2265187740|gb|CP054258.1| | 69713 | g296456 | i0 | 98.75 | 185.792682926829 | 160 | 2 | 98 | 0 | 5 | 164 | 907562 | 907721 | Treponema socranskii subsp. buccale strain ATCC 35534 chromosome, complete genome | blastn | 30470 | 285 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema socranskii | ||
| 23569701 | 23569701 | PRJNA641707_P_NODE_66959_length_257_cov_11.798077_g64296_i0 | PRJNA641707 | 66959 | 257 | 11.798077 | 30.32105789 | uncultured Spirochaetales bacterium | 457002 | Bacteria | Bacteria | 215 | 2.82e-51 | NTclustered | gi|2557660808|gb|OR396302.1| | 457002 | g64296 | i0 | 93.706 | 48.124513618677 | 143 | 9 | 56 | 0 | 111 | 253 | 177 | 35 | Uncultured Spirochaetales bacterium clone Aly426_unbinned&&k119_801449 16S ribosomal RNA gene, partial sequence | blastn | 12368 | 215 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | uncultured Spirochaetales bacterium | ||||
| 24838403 | 24838403 | PRJNA641707_P_NODE_156780_length_222_cov_23.069364_g154117_i0 | PRJNA641707 | 156780 | 222 | 23.069364 | 51.21398808 | Treponema vincentii | 69710 | Bacteria | Bacteria | 388 | 1.32e-103 | NTclustered | gi|2265115921|gb|CP051153.1| | 69710 | g154117 | i0 | 99.074 | 170.297297297297 | 216 | 2 | 97 | 0 | 6 | 221 | 351573 | 351788 | Treponema vincentii strain OMZ 862 chromosome, complete genome | blastn | 37806 | 388 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema vincentii | ||
| 24841226 | 24841226 | PRJNA641707_P_NODE_279840_length_170_cov_6.396694_g277177_i0 | PRJNA641707 | 279840 | 170 | 6.396694 | 10.8743798 | Treponema phagedenis | 162 | Bacteria | Bacteria | 204 | 3.71e-48 | NTclustered | gi|1732601887|gb|CP042818.1| | 162 | g277177 | i0 | 89.091 | 39.6705882352941 | 165 | 17 | 96 | 1 | 7 | 170 | 2501791 | 2501627 | Treponema phagedenis strain B43.1 chromosome, complete genome | blastn | 6744 | 204 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema phagedenis | ||
| 24841292 | 24841292 | PRJNA641707_P_NODE_282760_length_169_cov_5.441667_g280097_i0 | PRJNA641707 | 282760 | 169 | 5.441667 | 9.19641723 | Treponema parvum | 138851 | Bacteria | Bacteria | 206 | 1.02e-48 | NTclustered | gi|2023444933|gb|CP054257.1| | 138851 | g280097 | i0 | 89.634 | 187.189349112426 | 164 | 13 | 96 | 4 | 5 | 167 | 1517786 | 1517626 | Treponema parvum strain ATCC 700773 chromosome, complete genome | blastn | 31635 | 206 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema parvum | ||
| 24841843 | 24841843 | PRJNA641707_P_NODE_305280_length_163_cov_1.061404_g302617_i0 | PRJNA641707 | 305280 | 163 | 1.061404 | 1.73008852 | Spirochaetia bacterium | 2053615 | Bacteria | Bacteria | 104 | 3.7e-18 | NTclustered | gi|2621717749|emb|OY776146.1| | 2053615 | g302617 | i0 | 85.437 | 177.306748466258 | 103 | 11 | 72 | 4 | 5 | 106 | 854379 | 854478 | MAG: Spirochaetia bacterium isolate efeffb62-48c8-43b6-be4a-4368b18f5a81 genome assembly, chromosome: 1 | blastn | 28901 | 104 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetia bacterium | |||||
| 25384457 | 25384457 | PRJNA641707_P_NODE_65680_length_260_cov_11.402844_g63017_i0 | PRJNA641707 | 65680 | 260 | 11.402844 | 29.6473944 | Treponema | 157 | Bacteria | Bacteria | 449 | 7.190000000000001e-122 | NTclustered | gi|2265187740|gb|CP054258.1| | 69713 | g63017 | i0 | 98.431 | 79.2653846153846 | 255 | 4 | 98 | 0 | 1 | 255 | 2593958 | 2594212 | Treponema socranskii subsp. buccale strain ATCC 35534 chromosome, complete genome | blastn | 20609 | 449 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema socranskii |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;