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contig_metadata

5 rows where analysis = "blastn", bioproject = "PRJNA641707" and tax_phylum = "Nemertea"

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tax_superkingdom 1

tax_phylum 1

  • Nemertea · 5 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA641707 · 5 ✖

analysis 1

  • blastn · 5 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
612790 612790 PRJNA641707_P_NODE_188801_length_199_cov_4.693333_g186138_i0 PRJNA641707 188801 199 4.693333 9.33973267 Lineus longissimus 88925 Nemertea other_Eukaryota 126 1e-24   NTclustered gi|2724558000|ref|XM_064792449.1| 88925 g186138 i0 90.526 26.6231155778894 95 9 48 0 95 189 279 373 PREDICTED: Lineus longissimus ADP-ribosylation factor 2-like (LOC135500799), mRNA blastn 5298 126 1 Eukaryota Opisthokonta Metazoa Nemertea Pilidiophora Heteronemertea Lineidae Lineus Lineus longissimus
4440495 4440495 PRJNA641707_P_NODE_190184_length_199_cov_3.013333_g187521_i0 PRJNA641707 190184 199 3.013333 5.99653267 Lineus longissimus 88925 Nemertea other_Eukaryota 52.8 0.017   NTclustered gi|2724554636|ref|XM_064790669.1| 88925 g187521 i0 100 0.14070351758794 28 0 14 0 122 149 1388 1361 PREDICTED: Lineus longissimus FMRFamide receptor-like (LOC135499729), mRNA blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Nemertea Pilidiophora Heteronemertea Lineidae Lineus Lineus longissimus
8264113 8264113 PRJNA641707_P_NODE_100687_length_246_cov_4.126904_g98024_i0 PRJNA641707 100687 246 4.126904 10.15218384 Lineus longissimus 88925 Nemertea other_Eukaryota 69.4 2.21e-7   NTclustered gi|2724595195|ref|XM_064776632.1| 88925 g98024 i0 86.885 0.74390243902439 61 8 25 0 8 68 1989 2049 PREDICTED: Lineus longissimus isoleucine--tRNA ligase, cytoplasmic-like (LOC135491013), transcript variant X3, mRNA blastn 183 69.4 1 Eukaryota Opisthokonta Metazoa Nemertea Pilidiophora Heteronemertea Lineidae Lineus Lineus longissimus
13910360 13910360 PRJNA641707_P_NODE_157631_length_220_cov_8.760234_g154968_i0 PRJNA641707 157631 220 8.760234 19.2725148 Metazoa 33208 Nemertea other_Eukaryota 56.5 0.002   NTclustered gi|2724600996|ref|XM_064779684.1| 88925 g154968 i0 100 3.08181818181818 30 0 14 0 160 189 16669 16640 PREDICTED: Lineus longissimus pneumococcal serine-rich repeat protein-like (LOC135492937), partial mRNA blastn 678 56.5 1 Eukaryota Opisthokonta Metazoa Nemertea Pilidiophora Heteronemertea Lineidae Lineus Lineus longissimus
17194705 17194705 PRJNA641707_P_NODE_5854_length_874_cov_10.075152_g4394_i0 PRJNA641707 5854 874 10.075152 88.05682848 Lineus longissimus 88925 Nemertea other_Eukaryota 56.5 0.007   NTclustered gi|2724558490|ref|XM_064792713.1| 88925 g4394 i0 94.595 0.120137299771167 37 1 4 1 107 142 426 390 PREDICTED: Lineus longissimus histone H1-delta-like (LOC135500994), mRNA blastn 105 56.5 1 Eukaryota Opisthokonta Metazoa Nemertea Pilidiophora Heteronemertea Lineidae Lineus Lineus longissimus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;