RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA641707" and tax_phylum = "Negarnaviricota"

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tax_superkingdom 1

tax_phylum 1

  • Negarnaviricota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA641707 · 2 ✖

analysis 1

  • blastn · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
13366939 13366939 PRJNA641707_P_NODE_188751_length_199_cov_4.746667_g186088_i0 PRJNA641707 188751 199 4.746667 9.44586733 Fusarium oxysporum f. sp. cubense negative-stranded RNA virus 2 3038610 Viruses Viruses 110 1.01e-19   NTclustered gi|2581535808|gb|OQ685979.1| 3038610 g186088 i0 93.243 0.371859296482412 74 5 37 0 2 75 4566 4639 MAG: Fusarium oxysporum f. sp. cubense negative-stranded RNA virus 2 isolate FocNSRV2 genomic sequence blastn 74 110 1 Viruses   Orthornavirae Negarnaviricota         Fusarium oxysporum f. sp. cubense negative-stranded RNA virus 2
21015599 21015599 PRJNA641707_P_NODE_20837_length_477_cov_9.224299_g18312_i0 PRJNA641707 20837 477 9.224299 43.99990623 Hainan orthomyxo-like virus 2 2920452 Viruses Viruses 464 5.03e-126   NTclustered gi|2203408021|gb|MW784039.1| 2920452 g18312 i0 85.088 1.36687631027254 456 67 96 1 1 456 4 458 MAG: Hainan orthomyxo-like virus 2 isolate R84-690285 polymerase PA gene, complete cds blastn 652 464 1 Viruses   Orthornavirae Negarnaviricota Insthoviricetes Articulavirales Orthomyxoviridae   Hainan orthomyxo-like virus 2

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;