RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA641707" and tax_phylum = "Kiritimatiellota"

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tax_superkingdom 1

tax_phylum 1

  • Kiritimatiellota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA641707 · 2 ✖

analysis 1

  • blastn · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
18464328 18464328 PRJNA641707_P_NODE_16495_length_535_cov_4.551440_g14101_i0 PRJNA641707 16495 535 4.55144 24.350204 Kiritimatiella glycovorans 1307763 Bacteria Bacteria 154 1.4e-32   NTclustered gi|827038732|gb|CP010904.1| 1307763 g14101 i0 78.358 74.0093457943925 268 37 46 12 111 358 588662 588396 Kiritimatiella glycovorans strain L21-Fru-AB chromosome, complete genome blastn 39595 154 1 Bacteria PVC group Pseudomonadati Kiritimatiellota Kiritimatiellia Kiritimatiellales Kiritimatiellaceae Kiritimatiella Kiritimatiella glycovorans
21013265 21013265 PRJNA641707_P_NODE_102097_length_246_cov_3.944162_g99434_i0 PRJNA641707 102097 246 3.944162 9.70263852 Kiritimatiella glycovorans 1307763 Bacteria Bacteria 87.9 6.09e-13   NTclustered gi|827038732|gb|CP010904.1| 1307763 g99434 i0 84.884 0.349593495934959 86 13 35 0 159 244 588549 588634 Kiritimatiella glycovorans strain L21-Fru-AB chromosome, complete genome blastn 86 87.9 1 Bacteria PVC group Pseudomonadati Kiritimatiellota Kiritimatiellia Kiritimatiellales Kiritimatiellaceae Kiritimatiella Kiritimatiella glycovorans

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;