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contig_metadata

4 rows where analysis = "blastn", bioproject = "PRJNA641707" and tax_phylum = "Haptophyta"

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tax_superkingdom 1

tax_phylum 1

  • Haptophyta · 4 ✖

tax_clade 1

bioproject 1

  • PRJNA641707 · 4 ✖

analysis 1

  • blastn · 4 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6992342 6992342 PRJNA641707_P_NODE_235026_length_188_cov_6.669065_g232363_i0 PRJNA641707 235026 188 6.669065 12.5378422 Chrysotila carterae 13221 Haptophyta other_Eukaryota 154 4.29e-33   NTclustered gi|238617648|gb|FJ973403.1| 13221 g232363 i0 94.898 52.281914893617 98 5 52 0 2 99 104 7 Pleurochrysis carterae strain CCMP 874 alpha-tubulin (atub) gene, partial cds blastn 9829 154 1 Eukaryota Haptista   Haptophyta   Isochrysidales Isochrysidaceae Chrysotila Chrysotila carterae
7534993 7534993 PRJNA641707_P_NODE_246306_length_184_cov_1.474074_g243643_i0 PRJNA641707 246306 184 1.474074 2.71229616 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 209 8.8e-50   NTclustered gi|2059554211|gb|MZ469752.1| 1907791 g243643 i0 88.824 1.84782608695652 170 19 92 0 1 170 334 165 Phaeocystis sp. strain DAD-ALGEUK-24 large subunit ribosomal RNA gene, partial sequence; chloroplast blastn 340 209 1 Eukaryota Haptista   Haptophyta   Phaeocystales Phaeocystaceae Phaeocystis Phaeocystis sp.
10086528 10086528 PRJNA641707_P_NODE_52688_length_296_cov_5.611336_g50029_i0 PRJNA641707 52688 296 5.611336 16.60955456 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 71.3 7.59e-8   NTclustered gi|194145918|gb|EU615885.1| 171259 g50029 i0 100 15.0641891891892 38 0 13 0 8 45 740 777 Uncultured haptophyte clone MV5_19_35 28S ribosomal RNA gene, partial sequence blastn 4459 71.3 1 Eukaryota Haptista   Haptophyta         Haptophyta environmental samples
22293333 22293333 PRJNA641707_P_NODE_339198_length_150_cov_6.811881_g336535_i0 PRJNA641707 339198 150 6.811881 10.2178215 Emiliania huxleyi 2903 Haptophyta other_Eukaryota 54.7 0.003   NTclustered gi|551583694|ref|XM_005777204.1| 280463 g336535 i0 100 0.773333333333333 29 0 19 0 23 51 707 679 Emiliania huxleyi CCMP1516 hypothetical protein mRNA blastn 116 54.7 1 Eukaryota Haptista   Haptophyta   Isochrysidales Noelaerhabdaceae Emiliania Emiliania huxleyi

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;