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contig_metadata

21 rows where analysis = "blastn", bioproject = "PRJNA641707" and tax_phylum = "Echinodermata"

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tax_superkingdom 1

tax_phylum 1

  • Echinodermata · 21 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA641707 · 21 ✖

analysis 1

  • blastn · 21 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4438922 4438922 PRJNA641707_P_NODE_118224_length_245_cov_11.000000_g115561_i0 PRJNA641707 118224 245 11 26.95 Patiria miniata 46514 Echinodermata other_Eukaryota 82.4 2.82e-11   NTclustered gi|1944939444|ref|XM_038189959.1| 46514 g115561 i0 81.818 0.404081632653061 99 16 40 2 1 98 796 699 PREDICTED: Patiria miniata cilia- and flagella-associated protein 157-like (LOC119720318), mRNA blastn 99 82.4 1 Eukaryota Opisthokonta Metazoa Echinodermata Asteroidea Valvatida Asterinidae Patiria Patiria miniata
4439904 4439904 PRJNA641707_P_NODE_163704_length_206_cov_4.554140_g161041_i0 PRJNA641707 163704 206 4.55414 9.3815284 Asterias rubens 7604 Echinodermata other_Eukaryota 135 1.74e-27   NTclustered gi|1834285991|ref|XM_033768267.1| 7604 g161041 i0 84.672 56.4854368932039 137 19 66 2 66 201 1954 1819 PREDICTED: Asterias rubens CUGBP Elav-like family member 3-A (LOC117287762), transcript variant X1, mRNA blastn 11636 135 1 Eukaryota Opisthokonta Metazoa Echinodermata Asteroidea Forcipulatida Asteriidae Asterias Asterias rubens
6991307 6991307 PRJNA641707_P_NODE_190246_length_199_cov_2.933333_g187583_i0 PRJNA641707 190246 199 2.933333 5.83733267 Anneissia japonica 1529436 Echinodermata other_Eukaryota 121 4.669999999999999e-23   NTclustered gi|1826680293|ref|XM_033272049.1| 1529436 g187583 i0 91.86 4.62311557788945 86 7 43 0 98 183 1124 1039 PREDICTED: Anneissia japonica transcription factor Sp8-like (LOC117125530), transcript variant X6, mRNA blastn 920 121 1 Eukaryota Opisthokonta Metazoa Echinodermata Crinoidea Comatulida Comatulidae Anneissia Anneissia japonica
6994035 6994035 PRJNA641707_P_NODE_305126_length_163_cov_1.596491_g302463_i0 PRJNA641707 305126 163 1.596491 2.60228033 Patiria miniata 46514 Echinodermata other_Eukaryota 108 2.86e-19   NTclustered gi|1944883718|ref|XM_038202922.1| 46514 g302463 i0 84.404 4.89570552147239 109 17 67 0 55 163 113 221 PREDICTED: Patiria miniata dynein light chain LC6, flagellar outer arm (LOC119730150), mRNA blastn 798 108 1 Eukaryota Opisthokonta Metazoa Echinodermata Asteroidea Valvatida Asterinidae Patiria Patiria miniata
8808822 8808822 PRJNA641707_P_NODE_102027_length_246_cov_3.954315_g99364_i0 PRJNA641707 102027 246 3.954315 9.7276149 root 1 Root_unresolved Root_unresolved 56.5 0.002   NTclustered gi|1944905423|ref|XM_038209528.1| 46514 g99364 i0 100 6.06910569105691 30 0 12 0 7 36 8187 8216 PREDICTED: Patiria miniata neurogenic locus Notch protein-like (LOC119735676), transcript variant X42, mRNA blastn 1493 56.5 1 Eukaryota Opisthokonta Metazoa Echinodermata Asteroidea Valvatida Asterinidae Patiria Patiria miniata
9544815 9544815 PRJNA641707_P_NODE_34788_length_367_cov_6.415094_g32161_i0 PRJNA641707 34788 367 6.415094 23.54339498 Asterias rubens 7604 Echinodermata other_Eukaryota 124 7.28e-24   NTclustered gi|1834277309|ref|XM_033779211.1| 7604 g32161 i0 80.347 2.50136239782016 173 26 47 6 148 318 737 571 PREDICTED: Asterias rubens eukaryotic translation initiation factor 2 subunit 3 (LOC117296342), mRNA blastn 918 124 1 Eukaryota Opisthokonta Metazoa Echinodermata Asteroidea Forcipulatida Asteriidae Asterias Asterias rubens
9546037 9546037 PRJNA641707_P_NODE_87728_length_246_cov_6.147208_g85065_i0 PRJNA641707 87728 246 6.147208 15.12213168 Strongylocentrotus purpuratus 7668 Echinodermata other_Eukaryota 93.5 1.31e-14   NTclustered gi|1752395007|ref|XM_011670321.2| 7668 g85065 i0 88.312 3.6869918699187 77 9 31 0 146 222 1072 1148 PREDICTED: Strongylocentrotus purpuratus serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit delta isoform (LOC577346), transcript variant X2, mRNA blastn 907 93.5 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Camarodonta Strongylocentrotidae Strongylocentrotus Strongylocentrotus purpuratus
10821282 10821282 PRJNA641707_P_NODE_69569_length_251_cov_9.688119_g66906_i0 PRJNA641707 69569 251 9.688119 24.31717869 Strongylocentrotus purpuratus 7668 Echinodermata other_Eukaryota 89.8 1.73e-13   NTclustered gi|1752370133|ref|XM_030989160.1| 7668 g66906 i0 88 0.298804780876494 75 9 30 0 6 80 554 480 PREDICTED: Strongylocentrotus purpuratus serine/threonine-protein kinase tricorner (LOC582923), mRNA blastn 75 89.8 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Camarodonta Strongylocentrotidae Strongylocentrotus Strongylocentrotus purpuratus
14639700 14639700 PRJNA641707_P_NODE_100772_length_246_cov_4.116751_g98109_i0 PRJNA641707 100772 246 4.116751 10.12720746 Lytechinus variegatus 7654 Echinodermata other_Eukaryota 121 6.01e-23   NTclustered gi|2037953422|ref|XR_005971516.1| 7654 g98109 i0 85.841 0.91869918699187 113 16 46 0 19 131 269 157 PREDICTED: Lytechinus variegatus uncharacterized LOC121425672 (LOC121425672), transcript variant X3, misc_RNA blastn 226 121 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Temnopleuroida Toxopneustidae Lytechinus Lytechinus variegatus
14641962 14641962 PRJNA641707_P_NODE_201752_length_197_cov_5.445946_g199089_i0 PRJNA641707 201752 197 5.445946 10.72851362 Diadema antillarum 105358 Echinodermata other_Eukaryota 52.8 0.017   NTclustered gi|2919532668|ref|XM_071655481.1| 105358 g199089 i0 100 0.142131979695431 28 0 14 0 148 175 5719 5692 PREDICTED: Diadema antillarum nucleoprotein TPR-like (LOC139745067), mRNA blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Diadematoida Diadematidae Diadema Diadema antillarum
14645286 14645286 PRJNA641707_P_NODE_38392_length_351_cov_5.973510_g35752_i0 PRJNA641707 38392 351 5.97351 20.9670201 Acanthaster planci 133434 Echinodermata other_Eukaryota 60.2 1.98e-4   NTclustered gi|1229154216|ref|XM_022234077.1| 133434 g35752 i0 100 0.333333333333333 32 0 9 0 46 77 1633 1602 PREDICTED: Acanthaster planci ribosomal protein S6 kinase alpha-4-like (LOC110978794), mRNA blastn 117 60.2 1 Eukaryota Opisthokonta Metazoa Echinodermata Asteroidea Valvatida Acanthasteridae Acanthaster Acanthaster planci
15186475 15186475 PRJNA641707_P_NODE_56492_length_284_cov_9.514894_g53831_i0 PRJNA641707 56492 284 9.514894 27.02229896 Metazoa 33208 Echinodermata other_Eukaryota 52.8 0.026   NTclustered gi|70887808|gb|AC165428.1| 7668 g53831 i0 100 0.295774647887324 28 0 10 0 123 150 478370 478343 Strongylocentrotus purpuratus BAC clone contig containing Eve, the hox cluster, cholinesterase, and COLP5alpha genes, complete sequence blastn 84 52.8 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Camarodonta Strongylocentrotidae Strongylocentrotus Strongylocentrotus purpuratus
15916141 15916141 PRJNA641707_P_NODE_211113_length_195_cov_7.164384_g208450_i0 PRJNA641707 211113 195 7.164384 13.9705488 Strongylocentrotus purpuratus 7668 Echinodermata other_Eukaryota 52.8 0.017   NTclustered gi|1752384519|ref|XM_030995292.1| 7668 g208450 i0 100 0.287179487179487 28 0 14 0 167 194 1643 1670 PREDICTED: Strongylocentrotus purpuratus uncharacterized LOC100893267 (LOC100893267), transcript variant X1, mRNA blastn 56 52.8 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Camarodonta Strongylocentrotidae Strongylocentrotus Strongylocentrotus purpuratus
17194138 17194138 PRJNA641707_P_NODE_339254_length_150_cov_6.544554_g336591_i0 PRJNA641707 339254 150 6.544554 9.816831 Diadema antillarum 105358 Echinodermata other_Eukaryota 65.8 1.57e-6   NTclustered gi|2919556077|ref|XM_071623634.1| 105358 g336591 i0 95.122 0.546666666666667 41 2 27 0 3 43 1507 1547 PREDICTED: Diadema antillarum long-chain specific acyl-CoA dehydrogenase, mitochondrial-like (LOC139711780), mRNA blastn 82 65.8 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Diadematoida Diadematidae Diadema Diadema antillarum
17735705 17735705 PRJNA641707_P_NODE_339094_length_150_cov_7.346535_g336431_i0 PRJNA641707 339094 150 7.346535 11.0198025 Metazoa 33208 Echinodermata other_Eukaryota 135 1.18e-27   NTclustered gi|217202|dbj|D01021.1|ANDDBHC 1043166 g336431 i0 83.108 9.1 148 25 99 0 3 150 5814 5961 Heliocidaris crassispina mRNA for dynein beta-heavy chain, complete cds blastn 1365 135 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Camarodonta Echinometridae Heliocidaris Heliocidaris crassispina
21013447 21013447 PRJNA641707_P_NODE_110277_length_246_cov_2.842640_g107614_i0 PRJNA641707 110277 246 2.84264 6.9928944 Diadema antillarum 105358 Echinodermata other_Eukaryota 63.9 1.03e-5   NTclustered gi|2919372062|ref|XM_071620433.1| 105358 g107614 i0 79.167 3.34552845528455 96 16 38 4 146 239 2007 1914 PREDICTED: Diadema antillarum heat shock protein 83-like (LOC139708481), mRNA blastn 823 63.9 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Diadematoida Diadematidae Diadema Diadema antillarum
21016251 21016251 PRJNA641707_P_NODE_237017_length_187_cov_9.434783_g234354_i0 PRJNA641707 237017 187 9.434783 17.64304421 Anneissia japonica 1529436 Echinodermata other_Eukaryota 100 5.64e-17   NTclustered gi|1826634372|ref|XM_033249952.1| 1529436 g234354 i0 88.889 0.433155080213904 81 9 43 0 60 140 539 459 PREDICTED: Anneissia japonica methylcrotonoyl-CoA carboxylase beta chain, mitochondrial-like (LOC117108080), mRNA blastn 81 100 1 Eukaryota Opisthokonta Metazoa Echinodermata Crinoidea Comatulida Comatulidae Anneissia Anneissia japonica
21019166 21019166 PRJNA641707_P_NODE_56677_length_284_cov_3.540426_g54016_i0 PRJNA641707 56677 284 3.540426 10.05480984 Lytechinus pictus 7653 Echinodermata other_Eukaryota 132 3.27e-26   NTclustered gi|2707414189|ref|XR_010296632.1| 7653 g54016 i0 81.366 8.5 161 30 57 0 17 177 2625 2465 PREDICTED: Lytechinus pictus coatomer subunit beta-like (LOC129282735), transcript variant X1, misc_RNA blastn 2414 132 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Temnopleuroida Toxopneustidae Lytechinus Lytechinus pictus
21558033 21558033 PRJNA641707_P_NODE_125597_length_245_cov_3.010204_g122934_i0 PRJNA641707 125597 245 3.010204 7.3749998 root 1 Root_unresolved Root_unresolved 52.8 0.022   NTclustered gi|2707407323|ref|XM_054912764.2| 7653 g122934 i0 100 0.938775510204082 28 0 11 0 13 40 2159 2186 PREDICTED: Lytechinus pictus protein rolling stone-like (LOC129276383), mRNA blastn 230 52.8 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Temnopleuroida Toxopneustidae Lytechinus Lytechinus pictus
22293235 22293235 PRJNA641707_P_NODE_334498_length_152_cov_13.320388_g331835_i0 PRJNA641707 334498 152 13.320388 20.24698976 Anneissia japonica 1529436 Echinodermata other_Eukaryota 60.2 7.43e-5   NTclustered gi|1826623817|ref|XM_033245006.1| 1529436 g331835 i0 94.737 1 38 2 25 0 101 138 956 919 PREDICTED: Anneissia japonica aminopeptidase N-like (LOC117104265), transcript variant X4, mRNA blastn 152 60.2 1 Eukaryota Opisthokonta Metazoa Echinodermata Crinoidea Comatulida Comatulidae Anneissia Anneissia japonica
24839024 24839024 PRJNA641707_P_NODE_183900_length_199_cov_12.066667_g181237_i0 PRJNA641707 183900 199 12.066667 24.01266733 Strongylocentrotus purpuratus 7668 Echinodermata other_Eukaryota 102 1.69e-17   NTclustered gi|1752364945|ref|XM_011670502.2| 7668 g181237 i0 85.567 4.68341708542714 97 14 49 0 97 193 367 271 PREDICTED: Strongylocentrotus purpuratus tubulin beta-4B chain (LOC593362), mRNA blastn 932 102 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Camarodonta Strongylocentrotidae Strongylocentrotus Strongylocentrotus purpuratus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;