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contig_metadata

25 rows where analysis = "blastn", bioproject = "PRJNA641707" and tax_phylum = "Chytridiomycota"

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tax_superkingdom 1

tax_phylum 1

  • Chytridiomycota · 25 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA641707 · 25 ✖

analysis 1

  • blastn · 25 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
612274 612274 PRJNA641707_P_NODE_166521_length_202_cov_8.980392_g163858_i0 PRJNA641707 166521 202 8.980392 18.14039184 Polychytrium aggregatum 110093 Fungi Fungi 75 3.75e-9   NTclustered gi|2432140698|ref|XM_053110328.1| 110093 g163858 i0 88.525 0.633663366336634 61 7 30 0 104 164 141 81 Polychytrium aggregatum 60S ribosomal protein L11 (BJ171DRAFT_498001), mRNA blastn 128 75 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Polychytriales   Polychytrium Polychytrium aggregatum
615514 615514 PRJNA641707_P_NODE_305861_length_163_cov_0.894737_g303198_i0 PRJNA641707 305861 163 0.894737 1.45842131 Rhizophydium sp. JEL138 139068 Fungi Fungi 141 2.82e-29   NTclustered gi|30088585|gb|AY138801.1| 139068 g303198 i0 85.401 28.6625766871166 137 18 83 1 23 157 674 538 Rhizophydium sp. JEL138 beta-tubulin (btub1) gene, partial cds blastn 4672 141 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Rhizophydiales Rhizophydiaceae Rhizophydium Rhizophydium sp. JEL138
616982 616982 PRJNA641707_P_NODE_66441_length_258_cov_28.990431_g63778_i0 PRJNA641707 66441 258 28.990431 74.79531198 Spizellomyces punctatus 109760 Fungi Fungi 143 1.35e-29   NTclustered gi|1027029543|ref|XR_001677161.1| 645134 g63778 i0 88.793 47.7558139534884 116 13 45 0 6 121 3913 4028 Spizellomyces punctatus DAOM BR117 28S ribosomal RNA (SPPG_11002), rRNA blastn 12321 143 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Spizellomycetales Spizellomycetaceae Spizellomyces Spizellomyces punctatus
1157000 1157000 PRJNA641707_P_NODE_225241_length_191_cov_19.183099_g222578_i0 PRJNA641707 225241 191 19.183099 36.63971909 Chytridiomycetes 451435 Fungi Fungi 87.9 4.5e-13   NTclustered gi|1866582727|gb|MT730902.1| 110070 g222578 i0 85.393 43.2198952879581 89 8 46 4 99 185 4433 4518 Lacustromyces hiemalis isolate JEL0938 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 8255 87.9 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Polychytriales   Lacustromyces Lacustromyces hiemalis
2433472 2433472 PRJNA641707_P_NODE_9302_length_700_cov_1085.279570_g7381_i0 PRJNA641707 9302 700 1085.27957 7596.95699 Chytridiomycota 4761 Fungi Fungi 191 1.42e-43   NTclustered gi|612507318|gb|KF586842.1| 1486924 g7381 i0 83.902 30.6871428571429 205 27 29 6 6 208 5775 5975 Gromochytrium mamkaevae strain CALU x-51 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 21481 191 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Gromochytriales Gromochytriaceae Gromochytrium Gromochytrium mamkaevae
4443480 4443480 PRJNA641707_P_NODE_317364_length_159_cov_2.900000_g314701_i0 PRJNA641707 317364 159 2.9 4.611 Polychytrium aggregatum 110093 Fungi Fungi 54.7 0.004   NTclustered gi|2432139758|ref|XM_053107278.1| 110093 g314701 i0 96.875 0.20125786163522 32 1 20 0 78 109 327 358 Polychytrium aggregatum uncharacterized protein (BJ171DRAFT_409418), partial mRNA blastn 32 54.7 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Polychytriales   Polychytrium Polychytrium aggregatum
4984648 4984648 PRJNA641707_P_NODE_155764_length_225_cov_6.630682_g153101_i0 PRJNA641707 155764 225 6.630682 14.9190345 Opisthokonta 33154 Fungi Fungi 91.6 4.24e-14   NTclustered gi|1866582793|gb|MT730968.1| 4816 g153101 i0 98.077 23.0266666666667 52 1 23 0 173 224 5599 5650 Spizellomyces acuminatus isolate PLAUS Ad 20 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 5181 91.6 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Spizellomycetales Spizellomycetaceae Spizellomyces Spizellomyces acuminatus
6995137 6995137 PRJNA641707_P_NODE_48286_length_311_cov_7.148855_g45631_i0 PRJNA641707 48286 311 7.148855 22.23293905 Spizellomyces punctatus 109760 Fungi Fungi 207 5.86e-49   NTclustered gi|1027029543|ref|XR_001677161.1| 645134 g45631 i0 91.447 45.9614147909968 152 11 48 2 156 305 4042 3891 Spizellomyces punctatus DAOM BR117 28S ribosomal RNA (SPPG_11002), rRNA blastn 14294 207 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Spizellomycetales Spizellomycetaceae Spizellomyces Spizellomyces punctatus
8264593 8264593 PRJNA641707_P_NODE_122367_length_245_cov_5.806122_g119704_i0 PRJNA641707 122367 245 5.806122 14.2249989 Synchytrium microbalum 1806994 Fungi Fungi 75 4.72e-9   NTclustered gi|1759148857|ref|XM_031168492.1| 1806994 g119704 i0 84.211 0.689795918367347 76 12 31 0 10 85 620 695 Synchytrium microbalum glycerol-3-phosphate dehydrogenase (GUT2), partial mRNA blastn 169 75 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Synchytriales Synchytriaceae Synchytrium Synchytrium microbalum
8268390 8268390 PRJNA641707_P_NODE_289347_length_167_cov_4.491525_g286684_i0 PRJNA641707 289347 167 4.491525 7.50084675 Powellomyces hirtus 109895 Fungi Fungi 152 1.3399999999999998e-32   NTclustered gi|1652151693|gb|MK292693.1| 109895 g286684 i0 95.789 1.61077844311377 95 3 56 1 27 120 74101 74007 Powellomyces hirtus strain CBS 809.83 mitochondrion blastn 269 152 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Spizellomycetales Powellomycetaceae Powellomyces Powellomyces hirtus
9543132 9543132 PRJNA641707_P_NODE_26808_length_419_cov_10.027027_g24215_i0 PRJNA641707 26808 419 10.027027 42.01324313 Synchytrium microbalum 1806994 Fungi Fungi 113 1.82e-20   NTclustered gi|1759150808|ref|XM_031169028.1| 1806994 g24215 i0 80.405 0.353221957040573 148 29 35 0 21 168 195 48 Synchytrium microbalum uncharacterized protein (SmJEL517_g03100), partial mRNA blastn 148 113 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Synchytriales Synchytriaceae Synchytrium Synchytrium microbalum
10818321 10818321 PRJNA641707_P_NODE_246789_length_183_cov_10.029851_g244126_i0 PRJNA641707 246789 183 10.029851 18.35462733 Chytriomyces hyalinus 4814 Fungi Fungi 99 1.97e-16   NTclustered gi|1866582467|gb|MT730642.1| 4814 g244126 i0 78.261 46.568306010929 161 30 87 4 21 179 4342 4185 Chytriomyces hyalinus isolate JA12 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 8522 99 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Chytridiales Chytriomycetaceae Chytriomyces Chytriomyces hyalinus
10820813 10820813 PRJNA641707_P_NODE_50609_length_303_cov_6.074803_g47951_i0 PRJNA641707 50609 303 6.074803 18.40665309 uncultured Rhizophydiales 687209 Fungi Fungi 534 2.3e-147   NTclustered gi|1666220530|gb|MH643793.1| 687209 g47951 i0 98.993 98.5676567656766 298 3 98 0 6 303 5300 5597 Uncultured Rhizophydiales isolate SkChyt5 18S ribosomal RNA gene, partial sequence; putative homing endonuclease gene, complete cds; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 29866 534 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Rhizophydiales     uncultured Rhizophydiales
12635385 12635385 PRJNA641707_P_NODE_153210_length_231_cov_16.582418_g150547_i0 PRJNA641707 153210 231 16.582418 38.30538558 Rhizophydium 60186 Fungi Fungi 148 2.5599999999999997e-31   NTclustered gi|82398246|gb|DQ273781.1| 109902 g150547 i0 88.618 51.3203463203463 123 13 53 1 3 125 2029 1908 Rhizophydium sphaerotheca isolate AFTOL-ID 37 28S ribosomal RNA gene, partial sequence blastn 11855 148 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Rhizophydiales Rhizophydiaceae Rhizophydium Rhizophydium sphaerotheca
15917523 15917523 PRJNA641707_P_NODE_269913_length_174_cov_5.248000_g267250_i0 PRJNA641707 269913 174 5.248 9.13152 Polychytrium aggregatum 110093 Fungi Fungi 115 1.84e-21   NTclustered gi|2432132411|ref|XM_053109501.1| 110093 g267250 i0 80.795 1.52873563218391 151 25 86 2 7 155 1088 940 Polychytrium aggregatum ribosomal protein L3-domain-containing protein (BJ171DRAFT_489537), mRNA blastn 266 115 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Polychytriales   Polychytrium Polychytrium aggregatum
17194206 17194206 PRJNA641707_P_NODE_36234_length_360_cov_5.292605_g33600_i0 PRJNA641707 36234 360 5.292605 19.053378 Synchytrium sp. 1971732 Fungi Fungi 93.5 2.01e-14   NTclustered gi|1168020523|gb|KY800404.1| 1971732 g33600 i0 83.168 0.280555555555556 101 17 28 0 15 115 1006 906 Synchytrium sp. voucher BPI 893319 large subunit ribosomal RNA gene, partial sequence blastn 101 93.5 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Synchytriales Synchytriaceae Synchytrium Synchytrium sp.
17194667 17194667 PRJNA641707_P_NODE_56954_length_283_cov_5.735043_g54293_i0 PRJNA641707 56954 283 5.735043 16.23017169 Polychytrium aggregatum 110093 Fungi Fungi 121 7.059999999999999e-23   NTclustered gi|2432138713|ref|XM_053107478.1| 110093 g54293 i0 84.252 7.58657243816254 127 16 44 3 142 266 148 24 Polychytrium aggregatum large subunit ribosomal protein 29 (BJ171DRAFT_421272), partial mRNA blastn 2147 121 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Polychytriales   Polychytrium Polychytrium aggregatum
19741305 19741305 PRJNA641707_P_NODE_261276_length_177_cov_12.421875_g258613_i0 PRJNA641707 261276 177 12.421875 21.98671875 Spizellomyces punctatus 109760 Fungi Fungi 211 2.33e-50   NTclustered gi|1027029543|ref|XR_001677161.1| 645134 g258613 i0 88.953 75.7627118644068 172 18 97 1 2 172 4061 3890 Spizellomyces punctatus DAOM BR117 28S ribosomal RNA (SPPG_11002), rRNA blastn 13410 211 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Spizellomycetales Spizellomycetaceae Spizellomyces Spizellomyces punctatus
21019364 21019364 PRJNA641707_P_NODE_65217_length_261_cov_14.613208_g62554_i0 PRJNA641707 65217 261 14.613208 38.14047288 Spizellomyces punctatus 109760 Fungi Fungi 63.9 1.1e-5   NTclustered gi|1026947984|ref|XM_016748469.1| 645134 g62554 i0 95 0.306513409961686 40 2 15 0 199 238 878 839 Spizellomyces punctatus DAOM BR117 40S ribosomal protein S2 (SPPG_00135), mRNA blastn 80 63.9 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Spizellomycetales Spizellomycetaceae Spizellomyces Spizellomyces punctatus
21019568 21019568 PRJNA641707_P_NODE_73857_length_246_cov_20.791878_g71194_i0 PRJNA641707 73857 246 20.791878 51.14801988 Fimicolochytrium jonesii 1396493 Fungi Fungi 67.6 7.94e-7   NTclustered gi|2432098033|ref|XM_053071243.1| 1396493 g71194 i0 84.286 0.284552845528455 70 9 28 2 171 239 514 446 Fimicolochytrium jonesii ribosomal L27e protein family-domain-containing protein (EV422DRAFT_542018), mRNA blastn 70 67.6 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Spizellomycetales Powellomycetaceae Fimicolochytrium Fimicolochytrium jonesii
22288528 22288528 PRJNA641707_P_NODE_130218_length_244_cov_5.230769_g127555_i0 PRJNA641707 130218 244 5.230769 12.76307636 Lobulomyces angularis 109889 Fungi Fungi 132 2.75e-26   NTclustered gi|1402550331|ref|NG_060250.1| 109889 g127555 i0 95.181 0.340163934426229 83 4 34 0 158 240 3180 3098 Lobulomyces angularis JEL 45 28S rRNA gene, partial sequence; from reference material blastn 83 132 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Lobulomycetales Lobulomycetaceae Lobulomyces Lobulomyces angularis
22834713 22834713 PRJNA641707_P_NODE_274578_length_172_cov_6.609756_g271915_i0 PRJNA641707 274578 172 6.609756 11.36878032 Chytridiomycetes 451435 Fungi Fungi 76.8 8.56e-10   NTclustered gi|1866582484|gb|MT730659.1| 109881 g271915 i0 100 23.8313953488372 41 0 24 0 131 171 4689 4729 Nowakowskiella elegans isolate JEL0046 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 4099 76.8 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Cladochytriales Nowakowskiellaceae Nowakowskiella Nowakowskiella elegans
23568199 23568199 PRJNA641707_P_NODE_306059_length_162_cov_46.460177_g303396_i0 PRJNA641707 306059 162 46.460177 75.26548674 uncultured Neocallimastigales 325898 Fungi Fungi 150 4.65e-32   NTclustered gi|1799805380|gb|MN975409.1| 325898 g303396 i0 89.744 70.8950617283951 117 12 72 0 41 157 408 292 Uncultured Neocallimastigales clone ITS1_54_seq22 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, complete sequence; and 5.8S ribosomal RNA gene, partial sequence blastn 11485 150 1 Eukaryota Opisthokonta Fungi Chytridiomycota Neocallimastigomycetes Neocallimastigales     uncultured Neocallimastigales
24108800 24108800 PRJNA641707_P_NODE_216839_length_194_cov_4.862069_g214176_i0 PRJNA641707 216839 194 4.862069 9.43241386 Opisthokonta 33154 Fungi Fungi 248 1.99e-61   NTclustered gi|19386988|gb|AF450112.1| 109953 g214176 i0 90.476 93.6701030927835 189 16 97 2 1 188 654 467 Monoblepharis insignis translation elongation factor 1-alpha gene, partial cds blastn 18172 248 1 Eukaryota Opisthokonta Fungi Chytridiomycota Monoblepharidomycetes Monoblepharidales Monoblepharidaceae Monoblepharis Monoblepharis insignis
25382688 25382688 PRJNA641707_P_NODE_153500_length_231_cov_3.104396_g150837_i0 PRJNA641707 153500 231 3.104396 7.17115476 Eukaryota 2759 Fungi Fungi 220 5.35e-53   NTclustered gi|387156428|emb|HE806161.1| 1229259 g150837 i0 88.108 59.3246753246753 185 22 80 0 12 196 1785 1969 Uncultured Chytridium partial 26S rRNA gene, clone EopYyyy3 blastn 13704 220 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Chytridiales Chytridiaceae   uncultured Chytridium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;