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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA641707" and tax_phylum = "Candidatus Absconditibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Absconditibacteriota · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA641707 · 3 ✖

analysis 1

  • blastn · 3 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6989414 6989414 PRJNA641707_P_NODE_106526_length_246_cov_3.355330_g103863_i0 PRJNA641707 106526 246 3.35533 8.2541118 candidate division SR1 bacterium Aalborg_AAW-1 1643353 Bacteria Bacteria 178 3.5099999999999993e-40   NTclustered gi|821340791|gb|CP011268.1| 1643353 g103863 i0 98.99 0.873983739837398 99 1 40 0 146 244 326736 326638 Candidate division SR1 bacterium Aalborg_AAW-1 chromosome, complete genome blastn 215 178 1 Bacteria Bacteria candidate phyla   Candidatus Absconditibacteriota         candidate division SR1 bacterium Aalborg_AAW-1
9541080 9541080 PRJNA641707_P_NODE_17868_length_515_cov_15.433476_g15432_i0 PRJNA641707 17868 515 15.433476 79.4824014 SR1 bacterium oral taxon 875 1226342 Bacteria Bacteria 815 0   NTclustered gi|402243570|gb|JX294356.1| 1226342 g15432 i0 95.49 88.6679611650485 510 23 99 0 5 514 930 1439 SR1 bacterium oral taxon 875 clone CN01 16S ribosomal RNA gene, partial sequence blastn 45664 815 1 Bacteria Bacteria candidate phyla   Candidatus Absconditibacteriota         SR1 bacterium oral taxon 875
18469503 18469503 PRJNA641707_P_NODE_795_length_1831_cov_31.172278_g508_i0 PRJNA641707 795 1831 31.172278 570.76441018 candidate division SR1 bacterium RAAC1_SR1_1 1394709 Bacteria Bacteria 1358 0   NTclustered gi|563351663|gb|CP006913.1| 1394709 g508 i0 80.347 109.447842708902 1847 317 99 43 2 1825 126697 124874 Candidate division SR1 bacterium RAAC1_SR1_1 chromosome, complete genome blastn 200399 1358 1 Bacteria Bacteria candidate phyla   Candidatus Absconditibacteriota         candidate division SR1 bacterium RAAC1_SR1_1

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;