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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA641707" and tax_clade = "SAR92 clade"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • SAR92 clade · 2 ✖

bioproject 1

  • PRJNA641707 · 2 ✖

analysis 1

  • blastn · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
614910 614910 PRJNA641707_P_NODE_282561_length_169_cov_6.091667_g279898_i0 PRJNA641707 282561 169 6.091667 10.29491723 SAR92 clade bacterium H455 2974818 Bacteria Bacteria 89.8 1.08e-13   NTclustered gi|2293304500|gb|CP103416.1| 2974818 g279898 i0 88.889 0.42603550295858 72 8 43 0 2 73 64280 64351 SAR92 clade bacterium H455 chromosome blastn 72 89.8 1 Bacteria SAR92 clade Pseudomonadati Pseudomonadota Gammaproteobacteria Cellvibrionales Porticoccaceae   SAR92 clade bacterium H455
17191331 17191331 PRJNA641707_P_NODE_217154_length_194_cov_4.179310_g214491_i0 PRJNA641707 217154 194 4.17931 8.1078614000000009 SAR92 clade bacterium H455 2974818 Bacteria Bacteria 241 3.3300000000000007e-59   NTclustered gi|2293304500|gb|CP103416.1| 2974818 g214491 i0 89.84 392.577319587629 187 19 96 0 3 189 2636538 2636724 SAR92 clade bacterium H455 chromosome blastn 76160 241 1 Bacteria SAR92 clade Pseudomonadati Pseudomonadota Gammaproteobacteria Cellvibrionales Porticoccaceae   SAR92 clade bacterium H455

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;