RNAquarium Metadata Server
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contig_metadata

10 rows where analysis = "blastn", bioproject = "PRJNA640350" and tax_phylum = "Basidiomycota"

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tax_superkingdom 1

tax_phylum 1

  • Basidiomycota · 10 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA640350 · 10 ✖

analysis 1

  • blastn · 10 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3161444 3161444 PRJNA640350_P_NODE_37663_length_156_cov_1.393701_g37502_i0 PRJNA640350 37663 156 1.393701 2.17417356 Malassezia restricta 76775 Fungi Fungi 289 9e-74   NTclustered gi|1546638481|ref|XM_027630882.1| 76775 g37502 i0 100 1 156 0 100 0 1 156 727 572 Malassezia restricta dynactin 4 (MRET_4255), partial mRNA blastn 156 289 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia restricta
4438192 4438192 PRJNA640350_P_NODE_32804_length_165_cov_2.500000_g32643_i0 PRJNA640350 32804 165 2.5 4.125 Malassezia restricta 76775 Fungi Fungi 305 9.59e-79   NTclustered gi|1546631852|ref|XM_027627586.1| 76775 g32643 i0 100 1 165 0 100 0 1 165 2332 2168 Malassezia restricta U3 small nucleolar RNA-associated protein 21 (MRET_0959), partial mRNA blastn 165 305 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia restricta
6259182 6259182 PRJNA640350_P_NODE_12425_length_337_cov_1.266234_g12264_i0 PRJNA640350 12425 337 1.266234 4.26720858 Basidiomycota 5204 Fungi Fungi 150 1.1e-31   NTclustered gi|25900975|dbj|AB085808.1| 5221 g12264 i0 100 24.0356083086053 81 0 24 0 254 334 1596 1516 Trimorphomyces papilionaceus gene for 18S rRNA, partial sequence, strain:JCM 9899 blastn 8100 150 1 Eukaryota Opisthokonta Fungi Basidiomycota Tremellomycetes Tremellales Trimorphomycetaceae Trimorphomyces Trimorphomyces papilionaceus
8263795 8263795 PRJNA640350_P_NODE_38987_length_153_cov_3.040323_g38826_i0 PRJNA640350 38987 153 3.040323 4.65169419 Malassezia restricta 76775 Fungi Fungi 220 3.25e-53   NTclustered gi|1546635595|ref|XR_003525367.1| 76775 g38826 i0 100 58.3464052287582 119 0 78 0 31 149 1 119 Malassezia restricta 5S ribosomal RNA (MRET_r0001), rRNA blastn 8927 220 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia restricta
9539103 9539103 PRJNA640350_P_NODE_40448_length_151_cov_2.098361_g40287_i0 PRJNA640350 40448 151 2.098361 3.16852511 Malassezia restricta 76775 Fungi Fungi 279 5.19e-71   NTclustered gi|1546631988|ref|XM_027627654.1| 76775 g40287 i0 100 1 151 0 100 0 1 151 1422 1272 Malassezia restricta mitosis inhibitor protein kinase SWE1 (MRET_1027), partial mRNA blastn 151 279 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia restricta
12089972 12089972 PRJNA640350_P_NODE_40710_length_151_cov_1.393443_g40549_i0 PRJNA640350 40710 151 1.393443 2.10409893 Malassezia globosa 76773 Fungi Fungi 274 2.42e-69   NTclustered gi|32452409|dbj|AB099880.1| 76773 g40549 i0 99.338 2 151 1 100 0 1 151 274 424 Malassezia globosa DNA, intergenic spacer 2 region sequence, strain: CBS 8745 blastn 302 274 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia globosa
15913360 15913360 PRJNA640350_P_NODE_29833_length_173_cov_1.576389_g29672_i0 PRJNA640350 29833 173 1.576389 2.72715297 Malassezia restricta 76775 Fungi Fungi 193 8.21e-45   NTclustered gi|1546635098|ref|XM_027629208.1| 76775 g29672 i0 100 0.601156069364162 104 0 60 0 1 104 569 672 Malassezia restricta proteophosphoglycan ppg4 (MRET_2581), partial mRNA blastn 104 193 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia restricta
17188451 17188451 PRJNA640350_P_NODE_35294_length_160_cov_1.748092_g35133_i0 PRJNA640350 35294 160 1.748092 2.7969472 Malassezia restricta 76775 Fungi Fungi 219 1.2399999999999999e-52   NTclustered gi|1546630507|ref|XM_027626914.1| 76775 g35133 i0 91.25 1 160 14 100 0 1 160 890 1049 Malassezia restricta myotubularin-related protein 6/7/8 (MRET_0287), partial mRNA blastn 160 219 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia restricta
22287550 22287550 PRJNA640350_P_NODE_31298_length_169_cov_1.957143_g31137_i0 PRJNA640350 31298 169 1.957143 3.30757167 Malassezia restricta 76775 Fungi Fungi 311 2.11e-80   NTclustered gi|1546637641|ref|XM_027630462.1| 76775 g31137 i0 100 0.994082840236686 168 0 99 0 2 169 710 543 Malassezia restricta ammonium transporter, Amt family (MRET_3835), partial mRNA blastn 168 311 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia restricta
23562957 23562957 PRJNA640350_P_NODE_1639_length_651_cov_1.217042_g1528_i0 PRJNA640350 1639 651 1.217042 7.92294342 Malassezia restricta 76775 Fungi Fungi 370 1.57e-97   NTclustered gi|1546635598|ref|XR_003525370.1| 76775 g1528 i0 100 17.9585253456221 200 0 51 0 447 646 1622 1821 Malassezia restricta 28S ribosomal RNA (MRET_r0004), rRNA blastn 11691 370 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia restricta

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;