RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

4 rows where analysis = "blastn", bioproject = "PRJNA640350" and tax_kingdom = "Loebvirae"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Loebvirae · 4 ✖

bioproject 1

  • PRJNA640350 · 4 ✖

analysis 1

  • blastn · 4 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5714030 5714030 PRJNA640350_P_NODE_28085_length_178_cov_2.416107_g27924_i0 PRJNA640350 28085 178 2.416107 4.30067046 Inoviridae sp. 2219103 Viruses Viruses 329 6.21e-86   NTclustered gi|2057891989|tpg|BK051014.1| 2219103 g27924 i0 100 1 178 0 100 0 1 178 14696 14519 MAG TPA_asm: Inoviridae sp. isolate ctfkp1, partial genome blastn 178 329 1 Viruses   Loebvirae Hofneiviricota Faserviricetes Tubulavirales Inoviridae   Inoviridae sp.
5714098 5714098 PRJNA640350_P_NODE_34305_length_162_cov_1.796992_g34144_i0 PRJNA640350 34305 162 1.796992 2.9111270400000002 Inoviridae sp. 2219103 Viruses Viruses 300 4.36e-77   NTclustered gi|2057891989|tpg|BK051014.1| 2219103 g34144 i0 100 1 162 0 100 0 1 162 6107 6268 MAG TPA_asm: Inoviridae sp. isolate ctfkp1, partial genome blastn 162 300 1 Viruses   Loebvirae Hofneiviricota Faserviricetes Tubulavirales Inoviridae   Inoviridae sp.
10814626 10814626 PRJNA640350_P_NODE_23829_length_196_cov_1.898204_g23668_i0 PRJNA640350 23829 196 1.898204 3.72047984 Inoviridae sp. 2219103 Viruses Viruses 363 6.899999999999998e-96   NTclustered gi|2057891989|tpg|BK051014.1| 2219103 g23668 i0 100 1 196 0 100 0 1 196 2470 2665 MAG TPA_asm: Inoviridae sp. isolate ctfkp1, partial genome blastn 196 363 1 Viruses   Loebvirae Hofneiviricota Faserviricetes Tubulavirales Inoviridae   Inoviridae sp.
14639243 14639243 PRJNA640350_P_NODE_19012_length_234_cov_1.726829_g18851_i0 PRJNA640350 19012 234 1.726829 4.04077986 Inoviridae sp. 2219103 Viruses Viruses 399 6.499999999999999e-107   NTclustered gi|2057891989|tpg|BK051014.1| 2219103 g18851 i0 97.436 1 234 6 100 0 1 234 18065 17832 MAG TPA_asm: Inoviridae sp. isolate ctfkp1, partial genome blastn 234 399 1 Viruses   Loebvirae Hofneiviricota Faserviricetes Tubulavirales Inoviridae   Inoviridae sp.

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;