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contig_metadata

5 rows where analysis = "blastn", bioproject = "PRJNA640143" and tax_phylum = "Mucoromycota"

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tax_superkingdom 1

tax_phylum 1

  • Mucoromycota · 5 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA640143 · 5 ✖

analysis 1

  • blastn · 5 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4983589 4983589 PRJNA640143_S_NODE_10984_length_260_cov_5.695067_g10774_i0 PRJNA640143 10984 260 5.695067 14.8071742 Fungi 4751 Fungi Fungi 475 1.1899999999999999e-129   NTclustered gi|658131632|emb|HF968958.1| 4874 g10774 i0 99.615 141.346153846154 260 1 100 0 1 260 1998 2257 Gigaspora margarita partial 28S rRNA gene, strain BEG34, isolate spore 4, clone BL2_6_26 blastn 36750 475 1 Eukaryota Opisthokonta Fungi Mucoromycota Glomeromycetes Diversisporales Gigasporaceae Gigaspora Gigaspora margarita
6988747 6988747 PRJNA640143_S_NODE_7926_length_301_cov_2.068182_g7716_i0 PRJNA640143 7926 301 2.068182 6.22522782 Linnemannia elongata 310910 Fungi Fungi 75 5.98e-9   NTclustered gi|1358186640|gb|MH047197.1| 310910 g7716 i0 78.992 1.85714285714286 119 18 39 5 106 221 4049 4163 Linnemannia elongata 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 559 75 1 Eukaryota Opisthokonta Fungi Mucoromycota Mortierellomycetes Mortierellales Mortierellaceae Linnemannia Linnemannia elongata
13909369 13909369 PRJNA640143_S_NODE_23011_length_184_cov_0.918367_g22801_i0 PRJNA640143 23011 184 0.918367 1.68979528 Rhizopus 4842 Fungi Fungi 180 6.9e-41   NTclustered gi|262317959|dbj|AB512252.1| 64495 g22801 i0 85.311 36.6195652173913 177 22 95 4 2 176 935 1109 Rhizopus oryzae EF-1alpha gene for translation elongation factor 1-alpha, partial cds, strain: ATCC 96514 blastn 6738 180 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Rhizopodaceae Rhizopus Rhizopus arrhizus
18462039 18462039 PRJNA640143_S_NODE_25035_length_176_cov_6.230216_g24825_i0 PRJNA640143 25035 176 6.230216 10.96518016 Cokeromyces recurvatus 90255 Fungi Fungi 117 5.19e-22   NTclustered gi|2324062524|ref|XM_051526800.1| 90255 g24825 i0 84.874 20.6704545454545 119 15 68 2 34 152 1263 1378 Cokeromyces recurvatus translation elongation factor EF-1 alpha (BX663DRAFT_503679), partial mRNA blastn 3638 117 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Mucoraceae Cokeromyces Cokeromyces recurvatus
24836033 24836033 PRJNA640143_S_NODE_15220_length_223_cov_19.790323_g15010_i0 PRJNA640143 15220 223 19.790323 44.13242029 Phycomyces blakesleeanus 4837 Fungi Fungi 137 5.31e-28   NTclustered gi|1069945784|ref|XM_018437850.1| 763407 g15010 i0 93.478 7.26457399103139 92 6 41 0 1 92 285 376 Phycomyces blakesleeanus NRRL 1555(-) hypothetical protein partial mRNA blastn 1620 137 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Phycomycetaceae Phycomyces Phycomyces blakesleeanus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;