RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA640143" and tax_phylum = "Ignavibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Ignavibacteriota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA640143 · 2 ✖

analysis 1

  • blastn · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
8263152 8263152 PRJNA640143_S_NODE_22267_length_186_cov_130.852349_g22057_i0 PRJNA640143 22267 186 130.852349 243.38536914 Ignavibacteriota bacterium 2026749 Bacteria Bacteria 165 1.96e-36   NTclustered gi|1850842921|gb|CP053447.1| 2026749 g22057 i0 86.577 1.61827956989247 149 20 80 0 1 149 2024700 2024848 Ignavibacteriae bacterium isolate IGN3 chromosome blastn 301 165 1 Bacteria FCB group Pseudomonadati Ignavibacteriota         Ignavibacteriota bacterium
23562836 23562836 PRJNA640143_S_NODE_6859_length_320_cov_69.812721_g6649_i0 PRJNA640143 6859 320 69.812721 223.4007072 Ignavibacteriota bacterium 2026749 Bacteria Bacteria 409 1.55e-109   NTclustered gi|1850842921|gb|CP053447.1| 2026749 g6649 i0 92.606 0.8875 284 21 89 0 37 320 477630 477913 Ignavibacteriae bacterium isolate IGN3 chromosome blastn 284 409 1 Bacteria FCB group Pseudomonadati Ignavibacteriota         Ignavibacteriota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;