RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA640143" and tax_clade = "Stenosarchaea group"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • Stenosarchaea group · 2 ✖

bioproject 1

  • PRJNA640143 · 2 ✖

analysis 1

  • blastn · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6259165 6259165 PRJNA640143_S_NODE_9165_length_282_cov_4.069388_g8955_i0 PRJNA640143 9165 282 4.069388 11.47567416 Methanothrix 2222 Archaea Archaea 494 3.6e-135   NTclustered gi|2133328945|gb|CP086219.1| 90426 g8955 i0 98.227 2 282 5 100 0 1 282 1964346 1964065 MAG: Methanothrix sp. isolate MAG 281 chromosome blastn 564 494 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanotrichales Methanotrichaceae Methanothrix Methanothrix sp.
14638726 14638726 PRJNA640143_S_NODE_18832_length_202_cov_2.096970_g18622_i0 PRJNA640143 18832 202 2.09697 4.2358794 Methanothrix soehngenii 2223 Archaea Archaea 366 5.530000000000001e-97   NTclustered gi|328927127|gb|CP002565.1| 990316 g18622 i0 99.502 5.82673267326733 201 1 99 0 1 201 1703463 1703263 Methanosaeta concilii GP-6, complete genome blastn 1177 366 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanotrichales Methanotrichaceae Methanothrix Methanothrix soehngenii

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;