contig_metadata
27 rows where analysis = "blastn", bioproject = "PRJNA638724" and tax_phylum = "Bacillota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 3706983 | 3706983 | PRJNA638724_P_NODE_7363_length_242_cov_5.295858_g7277_i0 | PRJNA638724 | 7363 | 242 | 5.295858 | 12.81597636 | Staphylococcus | 1279 | Bacteria | Bacteria | 372 | 1.47e-98 | NTclustered | gi|1176884116|gb|CP020463.1| | 1282 | g7277 | i0 | 100 | 392.590909090909 | 201 | 0 | 83 | 0 | 1 | 201 | 750671 | 750471 | Staphylococcus epidermidis strain 1457 chromosome, complete genome | blastn | 95007 | 374 | 0.994652406417112 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Staphylococcaceae | Staphylococcus | Staphylococcus epidermidis | ||
| 8262830 | 8262830 | PRJNA638724_P_NODE_5847_length_265_cov_1.781250_g5761_i0 | PRJNA638724 | 5847 | 265 | 1.78125 | 4.7203125 | Bacillus pseudomycoides | 64104 | Bacteria | Bacteria | 414 | 2.68e-111 | NTclustered | gi|673968774|gb|CP007621.1| | 64104 | g5761 | i0 | 96.429 | 14.9660377358491 | 252 | 7 | 95 | 2 | 5 | 255 | 3134 | 3384 | Bacillus pseudomycoides strain 219298 plasmid, complete sequence | blastn | 3966 | 414 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Bacillaceae | Bacillus | Bacillus pseudomycoides | ||
| 8262835 | 8262835 | PRJNA638724_P_NODE_7467_length_241_cov_2.880952_g7381_i0 | PRJNA638724 | 7467 | 241 | 2.880952 | 6.94309432 | Eubacterium ventriosum | 39496 | Bacteria | Bacteria | 255 | 1.54e-63 | NTclustered | gi|2299453608|gb|CP102282.1| | 39496 | g7381 | i0 | 88.372 | 401.190871369295 | 215 | 21 | 88 | 4 | 20 | 232 | 186053 | 186265 | Eubacterium ventriosum strain ATCC 27560 chromosome, complete genome | blastn | 96687 | 255 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Eubacteriales | Eubacteriaceae | Eubacterium | Eubacterium ventriosum | ||
| 8808251 | 8808251 | PRJNA638724_P_NODE_2227_length_400_cov_5.544343_g2141_i0 | PRJNA638724 | 2227 | 400 | 5.544343 | 22.177372 | Bacillales | 1385 | Bacteria | Bacteria | 708 | 0 | NTclustered | gi|2692800537|gb|CP146065.1| | 1283 | g2141 | i0 | 99.235 | 466.525 | 392 | 3 | 98 | 0 | 1 | 392 | 771988 | 771597 | Staphylococcus haemolyticus strain SPS12 chromosome, complete genome | blastn | 186610 | 713 | 0.992987377279102 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Staphylococcaceae | Staphylococcus | Staphylococcus haemolyticus | ||
| 9538139 | 9538139 | PRJNA638724_P_NODE_7328_length_243_cov_0.905882_g7242_i0 | PRJNA638724 | 7328 | 243 | 0.905882 | 2.20129326 | Paucilactobacillus nenjiangensis | 1296540 | Bacteria | Bacteria | 422 | 1.45e-113 | NTclustered | gi|1747837594|gb|CP043939.1| | 1296540 | g7242 | i0 | 99.149 | 433.847736625514 | 235 | 0 | 96 | 1 | 1 | 233 | 861395 | 861161 | Paucilactobacillus nenjiangensis strain SH-Y15 chromosome, complete genome | blastn | 105425 | 422 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Lactobacillaceae | Paucilactobacillus | Paucilactobacillus nenjiangensis | ||
| 10083835 | 10083835 | PRJNA638724_P_NODE_1588_length_464_cov_2.342711_g1502_i0 | PRJNA638724 | 1588 | 464 | 2.342711 | 10.87017904 | Bacillales | 1385 | Bacteria | Bacteria | 839 | 0 | NTclustered | gi|2556673542|gb|OR367734.1| | 1282 | g1502 | i0 | 100 | 112.536637931034 | 454 | 0 | 98 | 0 | 11 | 464 | 88 | 541 | Staphylococcus epidermidis strain A3 16S ribosomal RNA gene, partial sequence | blastn | 52217 | 841 | 0.997621878715815 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Staphylococcaceae | Staphylococcus | Staphylococcus epidermidis | ||
| 10083840 | 10083840 | PRJNA638724_P_NODE_7748_length_235_cov_4.197531_g7662_i0 | PRJNA638724 | 7748 | 235 | 4.197531 | 9.86419785 | Bacillales | 1385 | Bacteria | Bacteria | 429 | 8.33e-116 | NTclustered | gi|1176884116|gb|CP020463.1| | 1282 | g7662 | i0 | 99.574 | 521.757446808511 | 235 | 1 | 100 | 0 | 1 | 235 | 750206 | 749972 | Staphylococcus epidermidis strain 1457 chromosome, complete genome | blastn | 122613 | 429 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Staphylococcaceae | Staphylococcus | Staphylococcus epidermidis | ||
| 10813780 | 10813780 | PRJNA638724_P_NODE_4169_length_307_cov_1.581197_g4083_i0 | PRJNA638724 | 4169 | 307 | 1.581197 | 4.85427479 | Stomatobaculum sp. F0698 | 3059030 | Bacteria | Bacteria | 278 | 4.34e-70 | NTclustered | gi|2557572515|gb|CP130060.1| | 3059030 | g4083 | i0 | 88.312 | 347.28338762215 | 231 | 27 | 86 | 0 | 43 | 273 | 1919304 | 1919074 | Stomatobaculum sp. F0698 chromosome, complete genome | blastn | 106616 | 278 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Lachnospirales | Lachnospiraceae | Stomatobaculum | Stomatobaculum sp. F0698 | ||
| 11358745 | 11358745 | PRJNA638724_P_NODE_4969_length_285_cov_1.405660_g4883_i0 | PRJNA638724 | 4969 | 285 | 1.40566 | 4.006131 | Mediterraneibacter | 2316020 | Bacteria | Bacteria | 359 | 1.39e-94 | NTclustered | gi|2813041538|emb|OZ186740.1| | 33038 | g4883 | i0 | 90.182 | 467.063157894737 | 275 | 27 | 96 | 0 | 1 | 275 | 711810 | 711536 | Mediterraneibacter gnavus isolate LUMC_Rgna_QRD030 genome assembly, chromosome: 1 | blastn | 133113 | 359 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Lachnospirales | Lachnospiraceae | Mediterraneibacter | Mediterraneibacter gnavus | ||
| 11358746 | 11358746 | PRJNA638724_P_NODE_5069_length_283_cov_0.957143_g4983_i0 | PRJNA638724 | 5069 | 283 | 0.957143 | 2.70871469 | root | 1 | Root_unresolved | Root_unresolved | 440 | 4.769999999999998e-119 | NTclustered | gi|1721134208|emb|LR699010.1| | 617123 | g4983 | i0 | 95.324 | 457.014134275618 | 278 | 12 | 98 | 1 | 1 | 277 | 488874 | 488597 | Lachnoanaerobaculum umeaense isolate MGYG-HGUT-02522 genome assembly, chromosome: 1 | blastn | 129335 | 440 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Lachnospirales | Lachnospiraceae | Lachnoanaerobaculum | Lachnoanaerobaculum umeaense | ||
| 12088994 | 12088994 | PRJNA638724_P_NODE_7410_length_242_cov_1.355030_g7324_i0 | PRJNA638724 | 7410 | 242 | 1.35503 | 3.2791726 | Bacillus thuringiensis | 1428 | Bacteria | Bacteria | 274 | 4.27e-69 | NTclustered | gi|2257811600|gb|CP085412.1| | 1428 | g7324 | i0 | 87.866 | 6.71487603305785 | 239 | 22 | 96 | 1 | 1 | 232 | 2919 | 2681 | Bacillus thuringiensis strain KF1 plasmid unnamed3, complete sequence | blastn | 1625 | 274 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Bacillaceae | Bacillus | Bacillus thuringiensis | ||
| 12634375 | 12634375 | PRJNA638724_P_NODE_7230_length_244_cov_0.900585_g7144_i0 | PRJNA638724 | 7230 | 244 | 0.900585 | 2.1974274 | Exiguobacterium | 33986 | Bacteria | Bacteria | 333 | 7.019999999999999e-87 | NTclustered | gi|407059973|gb|CP003063.1| | 1087448 | g7144 | i0 | 92.308 | 4.81967213114754 | 234 | 18 | 96 | 0 | 1 | 234 | 1395540 | 1395307 | Exiguobacterium antarcticum B7, complete genome | blastn | 1176 | 333 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Exiguobacterium | Exiguobacterium antarcticum | |||
| 13363751 | 13363751 | PRJNA638724_P_NODE_3591_length_328_cov_1.521569_g3505_i0 | PRJNA638724 | 3591 | 328 | 1.521569 | 4.99074632 | Mediterraneibacter gnavus | 33038 | Bacteria | Bacteria | 466 | 9.299999999999999e-127 | NTclustered | gi|2813041527|emb|OZ186729.1| | 33038 | g3505 | i0 | 92.879 | 481.170731707317 | 323 | 19 | 97 | 3 | 1 | 319 | 434616 | 434294 | Mediterraneibacter gnavus isolate LUMC_Rgna_QRD035 genome assembly, chromosome: 1 | blastn | 157824 | 466 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Lachnospirales | Lachnospiraceae | Mediterraneibacter | Mediterraneibacter gnavus | ||
| 13909276 | 13909276 | PRJNA638724_P_NODE_3131_length_347_cov_2.759124_g3045_i0 | PRJNA638724 | 3131 | 347 | 2.759124 | 9.57416028 | Streptococcus | 1301 | Bacteria | Bacteria | 617 | 2.58e-172 | NTclustered | gi|1943211519|gb|CP065707.1| | 1303 | g3045 | i0 | 99.703 | 335.057636887608 | 337 | 1 | 97 | 0 | 11 | 347 | 424070 | 424406 | Streptococcus oralis strain FDAARGOS_885 chromosome, complete genome | blastn | 116265 | 623 | 0.990369181380417 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Streptococcaceae | Streptococcus | Streptococcus oralis | ||
| 13909278 | 13909278 | PRJNA638724_P_NODE_5811_length_266_cov_1.424870_g5725_i0 | PRJNA638724 | 5811 | 266 | 1.42487 | 3.7901542 | Leuconostoc | 1243 | Bacteria | Bacteria | 473 | 4.379999999999999e-129 | NTclustered | gi|1799531339|gb|CP028255.1| | 1245 | g5725 | i0 | 100 | 333.954887218045 | 256 | 0 | 96 | 0 | 1 | 256 | 68198 | 67943 | Leuconostoc mesenteroides strain SRCM102735 chromosome, complete genome | blastn | 88832 | 473 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Lactobacillaceae | Leuconostoc | Leuconostoc mesenteroides | ||
| 14638485 | 14638485 | PRJNA638724_P_NODE_6512_length_253_cov_1.394444_g6426_i0 | PRJNA638724 | 6512 | 253 | 1.394444 | 3.52794332 | Peptostreptococcus porci | 2652282 | Bacteria | Bacteria | 87.9 | 6.29e-13 | NTclustered | gi|2677426753|dbj|AP029254.1| | 2652282 | g6426 | i0 | 86.42 | 0.320158102766798 | 81 | 10 | 32 | 1 | 3 | 82 | 222784 | 222704 | Peptostreptococcus porci GAI11004 DNA, complete genome | blastn | 81 | 87.9 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Peptostreptococcales | Peptostreptococcaceae | Peptostreptococcus | Peptostreptococcus porci | ||
| 14638486 | 14638486 | PRJNA638724_P_NODE_6572_length_252_cov_1.351955_g6486_i0 | PRJNA638724 | 6572 | 252 | 1.351955 | 3.4069266 | Selenomonas sp. oral taxon 920 | 1884263 | Bacteria | Bacteria | 444 | 3.2299999999999996e-120 | NTclustered | gi|1061029751|gb|CP017042.1| | 1884263 | g6486 | i0 | 99.588 | 73.9761904761905 | 243 | 1 | 96 | 0 | 1 | 243 | 346352 | 346110 | Selenomonas sp. oral taxon 920 strain W5150 chromosome, complete sequence | blastn | 18642 | 444 | 1 | Bacteria | Bacillati | Bacillota | Negativicutes | Selenomonadales | Selenomonadaceae | Selenomonas | Selenomonas sp. oral taxon 920 | ||
| 15912464 | 15912464 | PRJNA638724_P_NODE_4473_length_298_cov_1.657778_g4387_i0 | PRJNA638724 | 4473 | 298 | 1.657778 | 4.94017844 | Bacillus mycoides | 1405 | Bacteria | Bacteria | 518 | 2.2699999999999998e-142 | NTclustered | gi|2592571199|gb|CP136379.1| | 1405 | g4387 | i0 | 99.648 | 35.2751677852349 | 284 | 0 | 95 | 1 | 11 | 293 | 3854 | 3571 | Bacillus mycoides strain PAMC 29434 plasmid unnamed7, complete sequence | blastn | 10512 | 518 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Bacillaceae | Bacillus | Bacillus mycoides | ||
| 16458087 | 16458087 | PRJNA638724_P_NODE_8193_length_222_cov_4.395973_g8107_i0 | PRJNA638724 | 8193 | 222 | 4.395973 | 9.75906006 | Lactobacillus | 1578 | Bacteria | Bacteria | 377 | 2.86e-100 | NTclustered | gi|1193133691|gb|CP021136.1| | 83684 | g8107 | i0 | 100 | 520.117117117117 | 204 | 0 | 92 | 0 | 1 | 204 | 460946 | 461149 | Lactobacillus delbrueckii subsp. delbrueckii strain TUA4408L, complete genome | blastn | 115466 | 377 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Lactobacillaceae | Lactobacillus | Lactobacillus delbrueckii | ||
| 19736320 | 19736320 | PRJNA638724_P_NODE_3636_length_326_cov_1.407115_g3550_i0 | PRJNA638724 | 3636 | 326 | 1.407115 | 4.5871949 | Helcococcus ovis | 72026 | Bacteria | Bacteria | 366 | 9.64e-97 | NTclustered | gi|2873000570|gb|CP121192.1| | 72026 | g3550 | i0 | 91.144 | 774.064417177914 | 271 | 22 | 83 | 1 | 48 | 316 | 204027 | 203757 | Helcococcus ovis strain KG38 chromosome, complete genome | blastn | 252345 | 366 | 1 | Bacteria | Bacillati | Bacillota | Tissierellia | Tissierellales | Peptoniphilaceae | Helcococcus | Helcococcus ovis | ||
| 19736321 | 19736321 | PRJNA638724_P_NODE_4336_length_302_cov_1.030568_g4250_i0 | PRJNA638724 | 4336 | 302 | 1.030568 | 3.11231536 | Bacillus mycoides | 1405 | Bacteria | Bacteria | 409 | 1.45e-109 | NTclustered | gi|2070286654|gb|CP067056.1| | 1405 | g4250 | i0 | 92.334 | 3.70529801324503 | 287 | 22 | 95 | 0 | 16 | 302 | 1997 | 1711 | Bacillus mycoides strain JAS 83/3 plasmid pl7, complete sequence | blastn | 1119 | 409 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Bacillaceae | Bacillus | Bacillus mycoides | ||
| 19736326 | 19736326 | PRJNA638724_P_NODE_6976_length_247_cov_0.885057_g6890_i0 | PRJNA638724 | 6976 | 247 | 0.885057 | 2.18609079 | Catenibacterium mitsuokai | 100886 | Bacteria | Bacteria | 433 | 6.82e-117 | NTclustered | gi|2299336055|gb|CP102271.1| | 100886 | g6890 | i0 | 99.578 | 434.866396761134 | 237 | 1 | 96 | 0 | 1 | 237 | 143730 | 143494 | Catenibacterium mitsuokai strain DSM 15897 chromosome, complete genome | blastn | 107412 | 433 | 1 | Bacteria | Bacillati | Bacillota | Erysipelotrichia | Erysipelotrichales | Coprobacillaceae | Catenibacterium | Catenibacterium mitsuokai | ||
| 20281753 | 20281753 | PRJNA638724_P_NODE_4836_length_288_cov_1.418605_g4750_i0 | PRJNA638724 | 4836 | 288 | 1.418605 | 4.0855824 | root | 1 | Root_unresolved | Root_unresolved | 56.5 | 0.002 | NTclustered | gi|2633045940|gb|CP132148.1| | 1496 | g4750 | i0 | 92.5 | 1.35763888888889 | 40 | 2 | 14 | 1 | 105 | 144 | 117172 | 117134 | Clostridioides difficile strain SC084-01-01 plasmid p840101_2, complete sequence | blastn | 391 | 56.5 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Peptostreptococcales | Peptostreptococcaceae | Clostridioides | Clostridioides difficile | ||
| 21557232 | 21557232 | PRJNA638724_P_NODE_1317_length_502_cov_2.818182_g1232_i0 | PRJNA638724 | 1317 | 502 | 2.818182 | 14.14727364 | Streptococcus | 1301 | Bacteria | Bacteria | 904 | 0 | NTclustered | gi|1943213388|gb|CP065706.1| | 1303 | g1232 | i0 | 99.797 | 328.870517928287 | 492 | 1 | 98 | 0 | 1 | 492 | 198352 | 197861 | Streptococcus oralis strain FDAARGOS_886 chromosome, complete genome | blastn | 165093 | 904 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Streptococcaceae | Streptococcus | Streptococcus oralis | ||
| 23562201 | 23562201 | PRJNA638724_P_NODE_1599_length_463_cov_2.638462_g1513_i0 | PRJNA638724 | 1599 | 463 | 2.638462 | 12.21607906 | [Clostridium] symbiosum | 1512 | Bacteria | Bacteria | 660 | 0 | NTclustered | gi|2188832615|dbj|AP025571.1| | 1512 | g1513 | i0 | 92.967 | 464.578833693305 | 455 | 28 | 98 | 4 | 1 | 453 | 18896 | 18444 | [Clostridium] symbiosum CE91-St65 DNA, complete genome | blastn | 215100 | 660 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Lachnospirales | Lachnospiraceae | Otoolea | [Clostridium] symbiosum | ||
| 24107264 | 24107264 | PRJNA638724_P_NODE_5239_length_279_cov_1.660194_g5153_i0 | PRJNA638724 | 5239 | 279 | 1.660194 | 4.63194126 | Erysipelotrichaceae | 128827 | Bacteria | Bacteria | 335 | 2.2799999999999993e-87 | NTclustered | gi|2589153872|dbj|AP028934.1| | 102148 | g5153 | i0 | 94.47 | 436.885304659498 | 217 | 12 | 78 | 0 | 1 | 217 | 147935 | 147719 | Solobacterium moorei JCM 10645 DNA, complete genome | blastn | 121891 | 335 | 1 | Bacteria | Bacillati | Bacillota | Erysipelotrichia | Erysipelotrichales | Erysipelotrichaceae | Solobacterium | Solobacterium moorei | ||
| 25381700 | 25381700 | PRJNA638724_P_NODE_8560_length_199_cov_4.658730_g8474_i0 | PRJNA638724 | 8560 | 199 | 4.65873 | 9.2708727 | Lactobacillus | 1578 | Bacteria | Bacteria | 346 | 7.070000000000001e-91 | NTclustered | gi|2913931147|gb|CP181267.1| | 1584 | g8474 | i0 | 99.474 | 505.130653266332 | 190 | 1 | 95 | 0 | 10 | 199 | 301300 | 301111 | MAG: Lactobacillus delbrueckii isolate UW_FK_LACTO1_1 chromosome | blastn | 100521 | 346 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Lactobacillaceae | Lactobacillus | Lactobacillus delbrueckii |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;