RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA638138" and tax_phylum = "Cnidaria"

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tax_superkingdom 1

tax_phylum 1

  • Cnidaria · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA638138 · 3 ✖

analysis 1

  • blastn · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2430418 2430418 PRJNA638138_P_NODE_18722_length_253_cov_2.288889_g18507_i0 PRJNA638138 18722 253 2.288889 5.79088917 Metazoa 33208 Cnidaria other_Eukaryota 106 1.74e-18   NTclustered gi|2917940737|emb|OZ237566.1| 6108 g18507 i0 100 36.7272727272727 57 0 25 0 1 57 6792504 6792448 Anemonia sulcata genome assembly, chromosome: 12 blastn 9292 106 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Actiniaria Actiniidae Anemonia Anemonia sulcata
4437051 4437051 PRJNA638138_P_NODE_20104_length_251_cov_0.865169_g19889_i0 PRJNA638138 20104 251 0.865169 2.17157419 Montipora capricornis 246305 Cnidaria other_Eukaryota 54.7 0.006   NTclustered gi|2812123817|ref|XR_011127449.1| 246305 g19889 i0 100 0.115537848605578 29 0 12 0 15 43 1046 1018 PREDICTED: Montipora capricornis uncharacterized lncRNA (LOC138027322), ncRNA blastn 29 54.7 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Scleractinia Acroporidae Montipora Montipora capricornis
22286340 22286340 PRJNA638138_P_NODE_10458_length_326_cov_0.905138_g10243_i0 PRJNA638138 10458 326 0.905138 2.95074988 Eunicella cavolini 317547 Cnidaria other_Eukaryota 52.8 0.031   NTclustered gi|2918369535|emb|OZ237717.1| 317547 g10243 i0 100 0.0858895705521472 28 0 9 0 164 191 35648373 35648400 Eunicella cavolini genome assembly, chromosome: 1 blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Malacalcyonacea Eunicellidae Eunicella Eunicella cavolini

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;