contig_metadata
18 rows where analysis = "blastn", bioproject = "PRJNA638138" and tax_phylum = "Bacillota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1155201 | 1155201 | PRJNA638138_P_NODE_10621_length_324_cov_0.988048_g10406_i0 | PRJNA638138 | 10621 | 324 | 0.988048 | 3.20127552 | root | 1 | Root_unresolved | Root_unresolved | 599 | 8.67e-167 | NTclustered | gi|1796975023|gb|CP033086.1| | 1280 | g10406 | i0 | 100 | 57.7777777777778 | 324 | 0 | 100 | 0 | 1 | 324 | 2427506 | 2427829 | Staphylococcus aureus strain WH9628 chromosome | blastn | 18720 | 599 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Staphylococcaceae | Staphylococcus | Staphylococcus aureus | ||
| 1885431 | 1885431 | PRJNA638138_P_NODE_13502_length_295_cov_0.981982_g13287_i0 | PRJNA638138 | 13502 | 295 | 0.981982 | 2.8968469 | Anaerococcus sp. Marseille-Q7828 | 3036300 | Bacteria | Bacteria | 462 | 1.07e-125 | NTclustered | gi|2472116327|emb|OX458331.1| | 3036300 | g13287 | i0 | 94.915 | 865.6 | 295 | 15 | 100 | 0 | 1 | 295 | 256284 | 255990 | Anaerococcus sp. Marseille-Q7828 genome assembly, chromosome: contig00001 | blastn | 255352 | 462 | 1 | Bacteria | Bacillati | Bacillota | Tissierellia | Tissierellales | Peptoniphilaceae | Anaerococcus | Anaerococcus sp. Marseille-Q7828 | ||
| 3706863 | 3706863 | PRJNA638138_P_NODE_16863_length_267_cov_2.226804_g16648_i0 | PRJNA638138 | 16863 | 267 | 2.226804 | 5.94556668 | Bacilli | 91061 | Bacteria | Bacteria | 494 | 3.38e-135 | NTclustered | gi|2070669246|gb|MZ603108.1| | 1290 | g16648 | i0 | 100 | 100 | 267 | 0 | 100 | 0 | 1 | 267 | 298 | 32 | Staphylococcus hominis strain PSMR 5.6 16S ribosomal RNA gene, partial sequence | blastn | 26700 | 494 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Staphylococcaceae | Staphylococcus | Staphylococcus hominis | ||
| 4437266 | 4437266 | PRJNA638138_P_NODE_6704_length_386_cov_0.779553_g6489_i0 | PRJNA638138 | 6704 | 386 | 0.779553 | 3.00907458 | Abyssicoccus albus | 1817405 | Bacteria | Bacteria | 555 | 2.299999999999999e-153 | NTclustered | gi|1142909432|gb|CP019573.1| | 1817405 | g6489 | i0 | 92.746 | 312.544041450777 | 386 | 25 | 100 | 3 | 1 | 386 | 292038 | 292420 | Abyssicoccus albus strain S31 chromosome, complete genome | blastn | 120642 | 555 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Abyssicoccaceae | Abyssicoccus | Abyssicoccus albus | ||
| 6987800 | 6987800 | PRJNA638138_P_NODE_15386_length_279_cov_1.485437_g15171_i0 | PRJNA638138 | 15386 | 279 | 1.485437 | 4.14436923 | Weissella paramesenteroides | 1249 | Bacteria | Bacteria | 494 | 3.55e-135 | NTclustered | gi|2853045441|gb|CP097574.1| | 1249 | g15171 | i0 | 98.566 | 6.98207885304659 | 279 | 4 | 100 | 0 | 1 | 279 | 1941945 | 1942223 | Weissella paramesenteroides strain JL-5 chromosome, complete genome | blastn | 1948 | 494 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Lactobacillaceae | Weissella | Weissella paramesenteroides | ||
| 8808146 | 8808146 | PRJNA638138_P_NODE_21927_length_250_cov_0.870056_g21712_i0 | PRJNA638138 | 21927 | 250 | 0.870056 | 2.17514 | Staphylococcus | 1279 | Bacteria | Bacteria | 462 | 8.83e-126 | NTclustered | gi|1848617844|gb|CP053957.1| | 29388 | g21712 | i0 | 100 | 42 | 250 | 0 | 100 | 0 | 1 | 250 | 287235 | 286986 | Staphylococcus capitis strain FDAARGOS_753 chromosome, complete genome | blastn | 10500 | 462 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Staphylococcaceae | Staphylococcus | Staphylococcus capitis | ||
| 9538082 | 9538082 | PRJNA638138_P_NODE_588_length_1135_cov_1.049906_g462_i0 | PRJNA638138 | 588 | 1135 | 1.049906 | 11.9164331 | Staphylococcus epidermidis | 1282 | Bacteria | Bacteria | 704 | 0 | NTclustered | gi|2179631034|gb|CP090928.1| | 1282 | g462 | i0 | 78.831 | 41.5938325991189 | 1044 | 221 | 92 | 0 | 7 | 1050 | 1052 | 9 | Staphylococcus epidermidis strain 48 plasmid pSE48-4, complete sequence | blastn | 47209 | 704 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Staphylococcaceae | Staphylococcus | Staphylococcus epidermidis | ||
| 12088729 | 12088729 | PRJNA638138_P_NODE_19470_length_251_cov_0.865169_g19255_i0 | PRJNA638138 | 19470 | 251 | 0.865169 | 2.17157419 | Staphylococcus gallinarum | 1293 | Bacteria | Bacteria | 453 | 5.34e-123 | NTclustered | gi|2894814219|gb|CP178530.1| | 1293 | g19255 | i0 | 99.203 | 100.812749003984 | 251 | 2 | 100 | 0 | 1 | 251 | 473626 | 473876 | Staphylococcus gallinarum strain X16P4 chromosome, complete genome | blastn | 25304 | 453 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Staphylococcaceae | Staphylococcus | Staphylococcus gallinarum | ||
| 12634298 | 12634298 | PRJNA638138_P_NODE_29130_length_245_cov_0.895349_g28915_i0 | PRJNA638138 | 29130 | 245 | 0.895349 | 2.19360505 | Streptococcus | 1301 | Bacteria | Bacteria | 442 | 1.1199999999999994e-119 | NTclustered | gi|2886503043|emb|OZ217341.1| | 28037 | g28915 | i0 | 99.184 | 100 | 245 | 2 | 100 | 0 | 1 | 245 | 1355406 | 1355650 | Streptococcus mitis isolate S. mitis C22 genome assembly, chromosome: 1 | blastn | 24500 | 442 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Streptococcaceae | Streptococcus | Streptococcus mitis | ||
| 12634311 | 12634311 | PRJNA638138_P_NODE_32610_length_243_cov_0.905882_g32395_i0 | PRJNA638138 | 32610 | 243 | 0.905882 | 2.20129326 | Streptococcus | 1301 | Bacteria | Bacteria | 449 | 6.65e-122 | NTclustered | gi|1782758915|gb|CP018189.1| | 1304 | g32395 | i0 | 100 | 100 | 243 | 0 | 100 | 0 | 1 | 243 | 1563581 | 1563339 | Streptococcus salivarius strain ICDC3 chromosome, complete genome | blastn | 24300 | 449 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Streptococcaceae | Streptococcus | Streptococcus salivarius | ||
| 13909238 | 13909238 | PRJNA638138_P_NODE_34991_length_241_cov_0.916667_g34776_i0 | PRJNA638138 | 34991 | 241 | 0.916667 | 2.20916747 | Streptococcus | 1301 | Bacteria | Bacteria | 446 | 8.519999999999999e-121 | NTclustered | gi|926460225|gb|CP012588.1| | 1308 | g34776 | i0 | 100 | 99.9709543568465 | 241 | 0 | 100 | 0 | 1 | 241 | 407964 | 408204 | Streptococcus thermophilus strain MN-BM-A01, complete genome | blastn | 24093 | 446 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Streptococcaceae | Streptococcus | Streptococcus thermophilus | ||
| 14638258 | 14638258 | PRJNA638138_P_NODE_21512_length_250_cov_0.870056_g21297_i0 | PRJNA638138 | 21512 | 250 | 0.870056 | 2.17514 | Streptococcus mitis | 28037 | Bacteria | Bacteria | 392 | 1.1699999999999999e-104 | NTclustered | gi|1851386209|gb|CP047883.1| | 28037 | g21297 | i0 | 95.161 | 99.188 | 248 | 12 | 99 | 0 | 3 | 250 | 694883 | 694636 | Streptococcus mitis strain S022-V3-A4 chromosome, complete genome | blastn | 24797 | 392 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Streptococcaceae | Streptococcus | Streptococcus mitis | ||
| 15912195 | 15912195 | PRJNA638138_P_NODE_19673_length_251_cov_0.865169_g19458_i0 | PRJNA638138 | 19673 | 251 | 0.865169 | 2.17157419 | Staphylococcus hominis | 1290 | Bacteria | Bacteria | 464 | 2.47e-126 | NTclustered | gi|2870745991|gb|CP134693.1| | 1290 | g19458 | i0 | 100 | 99.4262948207171 | 251 | 0 | 100 | 0 | 1 | 251 | 734945 | 734695 | Staphylococcus hominis strain acrlw chromosome, complete genome | blastn | 24956 | 464 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Staphylococcaceae | Staphylococcus | Staphylococcus hominis | ||
| 17187372 | 17187372 | PRJNA638138_P_NODE_26954_length_246_cov_0.890173_g26739_i0 | PRJNA638138 | 26954 | 246 | 0.890173 | 2.18982558 | Exiguobacterium aurantiacum | 33987 | Bacteria | Bacteria | 372 | 1.5e-98 | NTclustered | gi|2274429004|gb|CP101462.1| | 33987 | g26739 | i0 | 93.902 | 5.99593495934959 | 246 | 15 | 100 | 0 | 1 | 246 | 1557386 | 1557141 | Exiguobacterium aurantiacum strain CX2 chromosome, complete genome | blastn | 1475 | 372 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Exiguobacterium | Exiguobacterium aurantiacum | |||
| 17733147 | 17733147 | PRJNA638138_P_NODE_3454_length_517_cov_2.675676_g3240_i0 | PRJNA638138 | 3454 | 517 | 2.675676 | 13.83324492 | Lactobacillus | 1578 | Bacteria | Bacteria | 913 | 0 | NTclustered | gi|2551527569|gb|CP130436.1| | 1579 | g3240 | i0 | 98.641 | 405.936170212766 | 515 | 7 | 99 | 0 | 1 | 515 | 128820 | 129334 | Lactobacillus acidophilus strain ATCC 53544 chromosome, complete genome | blastn | 209869 | 913 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Lactobacillaceae | Lactobacillus | Lactobacillus acidophilus | ||
| 21557098 | 21557098 | PRJNA638138_P_NODE_13817_length_292_cov_1.187215_g13602_i0 | PRJNA638138 | 13817 | 292 | 1.187215 | 3.4666678 | Streptococcus | 1301 | Bacteria | Bacteria | 540 | 4.74e-149 | NTclustered | gi|1140122741|gb|CP019562.1| | 1303 | g13602 | i0 | 100 | 335.921232876712 | 292 | 0 | 100 | 0 | 1 | 292 | 1569963 | 1570254 | Streptococcus oralis strain S.MIT/ORALIS-351 chromosome, complete genome | blastn | 98089 | 540 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Streptococcaceae | Streptococcus | Streptococcus oralis | ||
| 22286661 | 22286661 | PRJNA638138_P_NODE_9498_length_337_cov_2.488636_g9283_i0 | PRJNA638138 | 9498 | 337 | 2.488636 | 8.38670332 | Lactobacillus iners | 147802 | Bacteria | Bacteria | 623 | 5.369999999999999e-174 | NTclustered | gi|2769739957|gb|CP160078.1| | 147802 | g9283 | i0 | 100 | 494.489614243323 | 337 | 0 | 100 | 0 | 1 | 337 | 3422 | 3086 | Lactobacillus iners strain 0998_735_1_CBA_90B_S800 chromosome, complete genome | blastn | 166643 | 623 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Lactobacillaceae | Lactobacillus | Lactobacillus iners | ||
| 22832635 | 22832635 | PRJNA638138_P_NODE_1898_length_681_cov_2.435855_g1690_i0 | PRJNA638138 | 1898 | 681 | 2.435855 | 16.58817255 | Staphylococcus | 1279 | Bacteria | Bacteria | 1258 | 0 | NTclustered | gi|1176884116|gb|CP020463.1| | 1282 | g1690 | i0 | 100 | 546.859030837004 | 681 | 0 | 100 | 0 | 1 | 681 | 749123 | 748443 | Staphylococcus epidermidis strain 1457 chromosome, complete genome | blastn | 372411 | 1258 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Staphylococcaceae | Staphylococcus | Staphylococcus epidermidis |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;