contig_metadata
24 rows where analysis = "blastn", bioproject = "PRJNA637328" and tax_kingdom = "Fusobacteriati"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1155189 | 1155189 | PRJNA637328_S_NODE_3721_length_161_cov_4.879032_g3644_i0 | PRJNA637328 | 3721 | 161 | 4.879032 | 7.85524152 | Fusobacterium | 848 | Bacteria | Bacteria | 298 | 1.56e-76 | NTclustered | gi|2704983719|gb|CP077132.1| | 851 | g3644 | i0 | 100 | 490 | 161 | 0 | 100 | 0 | 1 | 161 | 93934 | 94094 | Fusobacterium nucleatum strain KCOM3208 chromosome, complete genome | blastn | 78890 | 298 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Fusobacterium | Fusobacterium nucleatum | ||
| 1885357 | 1885357 | PRJNA637328_P_NODE_9182_length_302_cov_1.577075_g8707_i0 | PRJNA637328 | 9182 | 302 | 1.577075 | 4.7627665 | Leptotrichia sp. oral taxon 212 | 712357 | Bacteria | Bacteria | 518 | 2.31e-142 | NTclustered | gi|922689899|gb|CP012410.1| | 712357 | g8707 | i0 | 97.674 | 389.76158940397403 | 301 | 7 | 99 | 0 | 2 | 302 | 805325 | 805025 | Leptotrichia sp. oral taxon 212 strain W10393, complete genome | blastn | 117708 | 518 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Leptotrichiaceae | Leptotrichia | Leptotrichia sp. oral taxon 212 | ||
| 1885381 | 1885381 | PRJNA637328_S_NODE_3682_length_162_cov_1.952000_g3605_i0 | PRJNA637328 | 3682 | 162 | 1.952 | 3.16224 | Leptotrichia hongkongensis | 554406 | Bacteria | Bacteria | 289 | 9.44e-74 | NTclustered | gi|1708587163|dbj|AP019846.1| | 554406 | g3605 | i0 | 98.773 | 489.388888888889 | 163 | 1 | 100 | 1 | 1 | 162 | 71578 | 71416 | Leptotrichia hongkongensis JMUB5056 DNA, complete genome | blastn | 79281 | 289 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Leptotrichiaceae | Leptotrichia | Leptotrichia hongkongensis | ||
| 2430342 | 2430342 | PRJNA637328_P_NODE_9582_length_299_cov_3.852000_g9107_i0 | PRJNA637328 | 9582 | 299 | 3.852 | 11.51748 | Leptotrichia | 32067 | Bacteria | Bacteria | 279 | 1.17e-70 | NTclustered | gi|1708568515|dbj|AP019827.1| | 157691 | g9107 | i0 | 100 | 11.5183946488294 | 151 | 0 | 100 | 0 | 149 | 299 | 1401127 | 1400977 | Leptotrichia shahii JCM16776 DNA, complete genome | blastn | 3444 | 279 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Leptotrichiaceae | Leptotrichia | Leptotrichia shahii | ||
| 3160138 | 3160138 | PRJNA637328_S_NODE_2483_length_204_cov_49.047904_g2406_i0 | PRJNA637328 | 2483 | 204 | 49.047904 | 100.05772416 | Leptotrichia hongkongensis | 554406 | Bacteria | Bacteria | 372 | 1.2e-98 | NTclustered | gi|1708587163|dbj|AP019846.1| | 554406 | g2406 | i0 | 99.512 | 461.196078431373 | 205 | 0 | 100 | 1 | 1 | 204 | 72148 | 72352 | Leptotrichia hongkongensis JMUB5056 DNA, complete genome | blastn | 94084 | 372 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Leptotrichiaceae | Leptotrichia | Leptotrichia hongkongensis | ||
| 4436613 | 4436613 | PRJNA637328_P_NODE_10424_length_290_cov_4.468880_g9949_i0 | PRJNA637328 | 10424 | 290 | 4.46888 | 12.959752 | Leptotrichia sp. SK-5 | 3075818 | Bacteria | Bacteria | 492 | 1.3399999999999996e-134 | NTclustered | gi|2899356158|dbj|AP028931.1| | 3075818 | g9949 | i0 | 97.241 | 10.9827586206897 | 290 | 8 | 100 | 0 | 1 | 290 | 2485037 | 2484748 | Leptotrichia sp. SK-5 DNA, complete genome | blastn | 3185 | 492 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Leptotrichiaceae | Leptotrichia | Leptotrichia sp. SK-5 | ||
| 4436914 | 4436914 | PRJNA637328_S_NODE_3124_length_179_cov_2.711268_g3047_i0 | PRJNA637328 | 3124 | 179 | 2.711268 | 4.85316972 | Leptotrichia wadei | 157687 | Bacteria | Bacteria | 320 | 3.76e-83 | NTclustered | gi|1708582457|dbj|AP019841.1| | 157687 | g3047 | i0 | 98.883 | 156.418994413408 | 179 | 2 | 100 | 0 | 1 | 179 | 221513 | 221691 | Leptotrichia wadei JMUB3936 DNA, complete genome | blastn | 27999 | 320 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Leptotrichiaceae | Leptotrichia | Leptotrichia wadei | ||
| 4983353 | 4983353 | PRJNA637328_P_NODE_16704_length_251_cov_1.257426_g16227_i0 | PRJNA637328 | 16704 | 251 | 1.257426 | 3.15613926 | Cetobacterium | 180162 | Bacteria | Bacteria | 436 | 5.369999999999999e-118 | NTclustered | gi|2666488225|gb|CP143319.1| | 188913 | g16227 | i0 | 98.008 | 18.6892430278884 | 251 | 5 | 100 | 0 | 1 | 251 | 1902498 | 1902248 | Cetobacterium somerae strain ceto chromosome, complete genome | blastn | 4691 | 436 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Cetobacterium | Cetobacterium somerae | ||
| 5712528 | 5712528 | PRJNA637328_P_NODE_10045_length_294_cov_2.363265_g9570_i0 | PRJNA637328 | 10045 | 294 | 2.363265 | 6.9479991 | Leptotrichia sp. oral taxon 212 | 712357 | Bacteria | Bacteria | 438 | 1.7899999999999995e-118 | NTclustered | gi|922689899|gb|CP012410.1| | 712357 | g9570 | i0 | 93.16 | 4.72108843537415 | 307 | 8 | 100 | 1 | 1 | 294 | 42646 | 42340 | Leptotrichia sp. oral taxon 212 strain W10393, complete genome | blastn | 1388 | 438 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Leptotrichiaceae | Leptotrichia | Leptotrichia sp. oral taxon 212 | ||
| 6258759 | 6258759 | PRJNA637328_P_NODE_1885_length_670_cov_2.441224_g1487_i0 | PRJNA637328 | 1885 | 670 | 2.441224 | 16.3562008 | Cetobacterium | 180162 | Bacteria | Bacteria | 584 | 5.32e-162 | NTclustered | gi|2201062197|gb|CP092519.1| | 188913 | g1487 | i0 | 82.519 | 6.26865671641791 | 675 | 109 | 99 | 8 | 2 | 670 | 408424 | 409095 | Cetobacterium somerae strain CS2105-BJ chromosome, complete genome | blastn | 4200 | 584 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Cetobacterium | Cetobacterium somerae | ||
| 6987712 | 6987712 | PRJNA637328_P_NODE_9306_length_301_cov_4.238095_g8831_i0 | PRJNA637328 | 9306 | 301 | 4.238095 | 12.75666595 | Leptotrichia sp. oral taxon 212 | 712357 | Bacteria | Bacteria | 263 | 1.19e-65 | NTclustered | gi|922689899|gb|CP012410.1| | 712357 | g8831 | i0 | 98.013 | 1.45514950166113 | 151 | 3 | 100 | 0 | 151 | 301 | 2292600 | 2292450 | Leptotrichia sp. oral taxon 212 strain W10393, complete genome | blastn | 438 | 263 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Leptotrichiaceae | Leptotrichia | Leptotrichia sp. oral taxon 212 | ||
| 8262208 | 8262208 | PRJNA637328_P_NODE_16727_length_251_cov_1.009901_g16250_i0 | PRJNA637328 | 16727 | 251 | 1.009901 | 2.53485151 | Leptotrichia sp. oral taxon 212 | 712357 | Bacteria | Bacteria | 409 | 1.17e-109 | NTclustered | gi|922689899|gb|CP012410.1| | 712357 | g16250 | i0 | 96.016 | 3.92430278884462 | 251 | 10 | 100 | 0 | 1 | 251 | 83111 | 83361 | Leptotrichia sp. oral taxon 212 strain W10393, complete genome | blastn | 985 | 409 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Leptotrichiaceae | Leptotrichia | Leptotrichia sp. oral taxon 212 | ||
| 8808059 | 8808059 | PRJNA637328_S_NODE_3767_length_160_cov_2.634146_g3690_i0 | PRJNA637328 | 3767 | 160 | 2.634146 | 4.2146336 | root | 1 | Root_unresolved | Root_unresolved | 296 | 5.55e-76 | NTclustered | gi|645319974|ref|NR_117292.1| | 860 | g3690 | i0 | 100 | 111.98125 | 160 | 0 | 100 | 0 | 1 | 160 | 710 | 551 | Fusobacterium periodonticum strain ATCC 33693 16S ribosomal RNA, partial sequence | blastn | 17917 | 296 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Fusobacterium | Fusobacterium periodonticum | ||
| 8808060 | 8808060 | PRJNA637328_S_NODE_3787_length_160_cov_1.520325_g3710_i0 | PRJNA637328 | 3787 | 160 | 1.520325 | 2.43252 | Cetobacterium | 180162 | Bacteria | Bacteria | 296 | 5.55e-76 | NTclustered | gi|2865368125|gb|CP122294.1| | 188913 | g3710 | i0 | 100 | 490.6375 | 160 | 0 | 100 | 0 | 1 | 160 | 280722 | 280563 | Cetobacterium somerae strain MSU41 plasmid p41_t2, complete sequence | blastn | 78502 | 296 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Cetobacterium | Cetobacterium somerae | ||
| 10083646 | 10083646 | PRJNA637328_P_NODE_568_length_1274_cov_4.385306_g368_i0 | PRJNA637328 | 568 | 1274 | 4.385306 | 55.86879844 | Leptotrichia | 32067 | Bacteria | Bacteria | 1807 | 0 | NTclustered | gi|1708582457|dbj|AP019841.1| | 157687 | g368 | i0 | 92.476 | 431.26295133438 | 1276 | 77 | 99 | 18 | 1 | 1268 | 2288679 | 2289943 | Leptotrichia wadei JMUB3936 DNA, complete genome | blastn | 549429 | 1810 | 0.998342541436464 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Leptotrichiaceae | Leptotrichia | Leptotrichia wadei | ||
| 10083651 | 10083651 | PRJNA637328_P_NODE_7748_length_329_cov_1.457143_g7273_i0 | PRJNA637328 | 7748 | 329 | 1.457143 | 4.79400047 | Cetobacterium | 180162 | Bacteria | Bacteria | 512 | 1.1799999999999998e-140 | NTclustered | gi|2666488225|gb|CP143319.1| | 188913 | g7273 | i0 | 94.817 | 68.3313069908815 | 328 | 17 | 99 | 0 | 2 | 329 | 16465 | 16138 | Cetobacterium somerae strain ceto chromosome, complete genome | blastn | 22481 | 512 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Cetobacterium | Cetobacterium somerae | ||
| 12634192 | 12634192 | PRJNA637328_S_NODE_1270_length_327_cov_30.344828_g1193_i0 | PRJNA637328 | 1270 | 327 | 30.344828 | 99.22758756 | Fusobacterium | 848 | Bacteria | Bacteria | 582 | 8.819999999999998e-162 | NTclustered | gi|2705020071|gb|CP084132.1| | 851 | g1193 | i0 | 98.777 | 482.495412844037 | 327 | 4 | 100 | 0 | 1 | 327 | 107609 | 107935 | Fusobacterium nucleatum strain KCOM3713 chromosome, complete genome | blastn | 157776 | 582 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Fusobacterium | Fusobacterium nucleatum | ||
| 13909107 | 13909107 | PRJNA637328_S_NODE_2271_length_217_cov_1.616667_g2194_i0 | PRJNA637328 | 2271 | 217 | 1.616667 | 3.50816739 | Fusobacterium | 848 | Bacteria | Bacteria | 390 | 3.579999999999999e-104 | NTclustered | gi|15028908|emb|AJ307974.1| | 851 | g2194 | i0 | 99.078 | 456.820276497696 | 217 | 2 | 100 | 0 | 1 | 217 | 303 | 87 | Fusobacterium nucleatum 23S rRNA gene, strain DSM 20482 | blastn | 99130 | 390 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Fusobacterium | Fusobacterium nucleatum | ||
| 16457847 | 16457847 | PRJNA637328_P_NODE_2753_length_545_cov_3.614919_g2300_i0 | PRJNA637328 | 2753 | 545 | 3.614919 | 19.70130855 | Leptotrichia | 32067 | Bacteria | Bacteria | 926 | 0 | NTclustered | gi|1708566027|dbj|AP019823.1| | 157688 | g2300 | i0 | 97.422 | 491.4 | 543 | 14 | 99 | 0 | 1 | 543 | 578501 | 577959 | Leptotrichia hofstadii JCM16775 DNA, complete genome | blastn | 267813 | 926 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Leptotrichiaceae | Leptotrichia | Leptotrichia hofstadii | ||
| 17187051 | 17187051 | PRJNA637328_P_NODE_4214_length_429_cov_1.952632_g3740_i0 | PRJNA637328 | 4214 | 429 | 1.952632 | 8.37679128 | Cetobacterium somerae | 188913 | Bacteria | Bacteria | 335 | 3.6699999999999985e-87 | NTclustered | gi|2201062197|gb|CP092519.1| | 188913 | g3740 | i0 | 81.075 | 0.997668997668998 | 428 | 74 | 99 | 5 | 5 | 429 | 409035 | 409458 | Cetobacterium somerae strain CS2105-BJ chromosome, complete genome | blastn | 428 | 335 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Cetobacterium | Cetobacterium somerae | ||
| 19735845 | 19735845 | PRJNA637328_P_NODE_3956_length_444_cov_2.554430_g3483_i0 | PRJNA637328 | 3956 | 444 | 2.55443 | 11.3416692 | Leptotrichia sp. HMT-225 | 3058373 | Bacteria | Bacteria | 811 | 0 | NTclustered | gi|2557559843|gb|CP130323.1| | 3058373 | g3483 | i0 | 99.774 | 375.078828828829 | 442 | 1 | 99 | 0 | 1 | 442 | 198520 | 198079 | Leptotrichia sp. HMT-225 chromosome, complete genome | blastn | 166535 | 811 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Leptotrichiaceae | Leptotrichia | Leptotrichia sp. HMT-225 | ||
| 22286009 | 22286009 | PRJNA637328_P_NODE_11398_length_281_cov_5.051724_g10922_i0 | PRJNA637328 | 11398 | 281 | 5.051724 | 14.19534444 | Leptotrichia sp. oral taxon 212 | 712357 | Bacteria | Bacteria | 405 | 1.73e-108 | NTclustered | gi|922689899|gb|CP012410.1| | 712357 | g10922 | i0 | 92.908 | 415.797153024911 | 282 | 14 | 99 | 3 | 3 | 281 | 53581 | 53859 | Leptotrichia sp. oral taxon 212 strain W10393, complete genome | blastn | 116839 | 405 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Leptotrichiaceae | Leptotrichia | Leptotrichia sp. oral taxon 212 | ||
| 23561713 | 23561713 | PRJNA637328_P_NODE_3639_length_465_cov_5.072115_g3169_i0 | PRJNA637328 | 3639 | 465 | 5.072115 | 23.58533475 | Leptotrichia sp. oral taxon 212 | 712357 | Bacteria | Bacteria | 656 | 0 | NTclustered | gi|922689899|gb|CP012410.1| | 712357 | g3169 | i0 | 92.258 | 263.247311827957 | 465 | 32 | 99 | 4 | 3 | 465 | 52804 | 53266 | Leptotrichia sp. oral taxon 212 strain W10393, complete genome | blastn | 122410 | 656 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Leptotrichiaceae | Leptotrichia | Leptotrichia sp. oral taxon 212 | ||
| 24107096 | 24107096 | PRJNA637328_S_NODE_1079_length_366_cov_2.082067_g1002_i0 | PRJNA637328 | 1079 | 366 | 2.082067 | 7.62036522 | Cetobacterium | 180162 | Bacteria | Bacteria | 604 | 2.129999999999999e-168 | NTclustered | gi|2666488225|gb|CP143319.1| | 188913 | g1002 | i0 | 96.448 | 524.344262295082 | 366 | 13 | 100 | 0 | 1 | 366 | 1317877 | 1317512 | Cetobacterium somerae strain ceto chromosome, complete genome | blastn | 191910 | 604 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Cetobacterium | Cetobacterium somerae |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;