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contig_metadata

13 rows where analysis = "blastn", bioproject = "PRJNA635874" and tax_phylum = "Heterolobosea"

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tax_superkingdom 1

tax_phylum 1

  • Heterolobosea · 13 ✖

tax_clade 1

bioproject 1

  • PRJNA635874 · 13 ✖

analysis 1

  • blastn · 13 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3158710 3158710 PRJNA635874_P_NODE_51843_length_249_cov_0.875000_g51696_i0 PRJNA635874 51843 249 0.875 2.17875 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 409 1.16e-109   NTclustered gi|290999065|ref|XM_002682055.1| 5762 g51696 i0 96.371 0.995983935742972 248 9 99 0 2 249 1237 990 Naegleria gruberi ribophorin I (NAEGRDRAFT_78171), mRNA blastn 248 409 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
3706499 3706499 PRJNA635874_P_NODE_9563_length_473_cov_1.152500_g9416_i0 PRJNA635874 9563 473 1.1525 5.451325 Naegleria 5761 Heterolobosea other_Eukaryota 182 5.62e-41   NTclustered gi|2031946985|emb|OD958550.1| 5763 g9416 i0 80.913 29.9450317124736 241 36 75 5 1 241 3030 3260 Naegleria fowleri Karachi_NF001 strain blastn 14164 182 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria fowleri
4435075 4435075 PRJNA635874_P_NODE_34144_length_287_cov_1.434579_g33997_i0 PRJNA635874 34144 287 1.434579 4.11724173 Allovahlkampfia sp. 1874883 Heterolobosea other_Eukaryota 438 1.7399999999999996e-118   NTclustered gi|2651357784|gb|PP174299.1| 1874883 g33997 i0 94.444 3.00696864111498 288 11 100 5 1 287 3878 4161 Allovahlkampfia sp. isolate S28D2 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 863 438 1 Eukaryota Discoba   Heterolobosea     Acrasidae Allovahlkampfia Allovahlkampfia sp.
4435383 4435383 PRJNA635874_P_NODE_45184_length_253_cov_2.138889_g45037_i0 PRJNA635874 45184 253 2.138889 5.41138917 Allovahlkampfia sp. 1874883 Heterolobosea other_Eukaryota 339 1.57e-88   NTclustered gi|2651357779|gb|PP174295.1| 1874883 g45037 i0 90.909 38.6284584980237 253 22 99 1 1 252 1864 2116 Allovahlkampfia sp. isolate P10 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 9773 339 1 Eukaryota Discoba   Heterolobosea     Acrasidae Allovahlkampfia Allovahlkampfia sp.
4435809 4435809 PRJNA635874_P_NODE_64904_length_244_cov_0.900585_g64757_i0 PRJNA635874 64904 244 0.900585 2.1974274 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 235 2.0399999999999997e-57   NTclustered gi|290993541|ref|XM_002679346.1| 5762 g64757 i0 87.019 76.8811475409836 208 27 85 0 37 244 908 701 Naegleria gruberi uncharacterized protein (NAEGRDRAFT_36068), mRNA blastn 18759 235 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
5711151 5711151 PRJNA635874_P_NODE_38345_length_274_cov_1.149254_g38198_i0 PRJNA635874 38345 274 1.149254 3.14895596 Allovahlkampfia sp. strain SO/1P 500012 Heterolobosea other_Eukaryota 501 2.08e-137   NTclustered gi|529154115|gb|EU266548.2| 500012 g38198 i0 99.636 65.6678832116788 275 0 100 1 1 274 584 858 Allovahlkampfia sp. strain SO/1P small subunit ribosomal RNA gene, complete sequence blastn 17993 501 1 Eukaryota Discoba   Heterolobosea     Acrasidae Allovahlkampfia Allovahlkampfia sp. strain SO/1P
8260247 8260247 PRJNA635874_P_NODE_23347_length_333_cov_1.173077_g23200_i0 PRJNA635874 23347 333 1.173077 3.90634641 Allovahlkampfia sp. 1874883 Heterolobosea other_Eukaryota 342 1.66e-89   NTclustered gi|2651357784|gb|PP174299.1| 1874883 g23200 i0 85.373 3.83783783783784 335 44 100 2 1 333 2431 2762 Allovahlkampfia sp. isolate S28D2 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 1278 342 1 Eukaryota Discoba   Heterolobosea     Acrasidae Allovahlkampfia Allovahlkampfia sp.
13908376 13908376 PRJNA635874_P_NODE_32031_length_294_cov_2.782805_g31884_i0 PRJNA635874 32031 294 2.782805 8.1814467 Allovahlkampfia 1217108 Heterolobosea other_Eukaryota 514 2.8899999999999997e-141   NTclustered gi|198250379|gb|EU696948.1| 556273 g31884 i0 99.644 81.608843537415 281 1 96 0 14 294 1297 1017 Allovahlkampfia spelaea strain SK1 18S ribosomal RNA gene, complete sequence blastn 23993 514 1 Eukaryota Discoba   Heterolobosea     Acrasidae Allovahlkampfia Allovahlkampfia spelaea
15910205 15910205 PRJNA635874_P_NODE_34993_length_284_cov_2.184834_g34846_i0 PRJNA635874 34993 284 2.184834 6.20492856 Allovahlkampfia sp. 1874883 Heterolobosea other_Eukaryota 481 2.82e-131   NTclustered gi|2651357784|gb|PP174299.1| 1874883 g34846 i0 97.193 56.2218309859155 285 6 100 2 1 284 2777 3060 Allovahlkampfia sp. isolate S28D2 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 15967 481 1 Eukaryota Discoba   Heterolobosea     Acrasidae Allovahlkampfia Allovahlkampfia sp.
17184920 17184920 PRJNA635874_P_NODE_19994_length_352_cov_4.175627_g19847_i0 PRJNA635874 19994 352 4.175627 14.69820704 Allovahlkampfia sp. strain SO/1P 500012 Heterolobosea other_Eukaryota 638 2.01e-178   NTclustered gi|529154115|gb|EU266548.2| 500012 g19847 i0 99.432 77.1761363636364 352 1 100 1 1 352 1746 1396 Allovahlkampfia sp. strain SO/1P small subunit ribosomal RNA gene, complete sequence blastn 27166 638 1 Eukaryota Discoba   Heterolobosea     Acrasidae Allovahlkampfia Allovahlkampfia sp. strain SO/1P
17185559 17185559 PRJNA635874_P_NODE_42914_length_260_cov_1.647059_g42767_i0 PRJNA635874 42914 260 1.647059 4.2823534 Vahlkampfia avara 74082 Heterolobosea other_Eukaryota 481 2.55e-131   NTclustered gi|2874368078|gb|PQ819802.1| 74082 g42767 i0 100 49.7576923076923 260 0 100 0 1 260 1435 1694 Vahlkampfia avara strain CCAP 1588/1A small subunit ribosomal RNA gene and internal transcribed spacer 1, partial sequence blastn 12937 481 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Vahlkampfia Vahlkampfia avara
18460235 18460235 PRJNA635874_P_NODE_64715_length_244_cov_0.900585_g64568_i0 PRJNA635874 64715 244 0.900585 2.1974274 Vahlkampfia avara 74082 Heterolobosea other_Eukaryota 444 3.11e-120   NTclustered gi|418968548|gb|KC164233.1| 74082 g64568 i0 99.59 9.29508196721311 244 0 100 1 1 244 37 279 Vahlkampfia avara clone CF1-119 18S ribosomal RNA gene, partial sequence blastn 2268 444 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Vahlkampfia Vahlkampfia avara
20280605 20280605 PRJNA635874_P_NODE_12656_length_421_cov_2.643678_g12509_i0 PRJNA635874 12656 421 2.643678 11.12988438 Allovahlkampfia 1217108 Heterolobosea other_Eukaryota 715 0   NTclustered gi|529154115|gb|EU266548.2| 500012 g12509 i0 97.4 43.3467933491686 423 6 100 5 1 421 432 13 Allovahlkampfia sp. strain SO/1P small subunit ribosomal RNA gene, complete sequence blastn 18249 721 0.991678224687933 Eukaryota Discoba   Heterolobosea     Acrasidae Allovahlkampfia Allovahlkampfia sp. strain SO/1P

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;