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contig_metadata

20 rows where analysis = "blastn", bioproject = "PRJNA635874" and tax_phylum = "Ciliophora"

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tax_superkingdom 1

tax_phylum 1

  • Ciliophora · 20 ✖

tax_clade 1

bioproject 1

  • PRJNA635874 · 20 ✖

analysis 1

  • blastn · 20 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
606631 606631 PRJNA635874_P_NODE_10421_length_456_cov_1.587467_g10274_i0 PRJNA635874 10421 456 1.587467 7.23884952 Chilodonella uncinata 151077 SAR_Eukaryotes SAR_Eukaryotes 795 0   NTclustered gi|300676714|gb|GQ377691.1| 151077 g10274 i0 98.879 48.4934210526316 446 4 98 1 12 456 5 450 Chilodonella uncinata rps22a (rps22a) mRNA, complete cds blastn 22113 795 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella uncinata
3158295 3158295 PRJNA635874_P_NODE_36563_length_279_cov_2.111650_g36416_i0 PRJNA635874 36563 279 2.11165 5.8915035 Chilodonella uncinata 151077 SAR_Eukaryotes SAR_Eukaryotes 438 1.6899999999999996e-118   NTclustered gi|110644972|gb|DQ665918.1| 151077 g36416 i0 94.982 97.831541218638 279 14 100 0 1 279 678 400 Chilodonella uncinata clone 1 beta-tubulin gene, partial cds blastn 27295 438 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella uncinata
3705974 3705974 PRJNA635874_P_NODE_26063_length_319_cov_1.792683_g25916_i0 PRJNA635874 26063 319 1.792683 5.71865877 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 254 7.64e-63   NTclustered gi|10805|emb|X52242.1| 5911 g25916 i0 86.522 62.3699059561129 230 31 72 0 1 230 247 476 T.thermophila mRNA for calmodulin blastn 19896 254 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena thermophila
5710543 5710543 PRJNA635874_P_NODE_17665_length_369_cov_1.655405_g17518_i0 PRJNA635874 17665 369 1.655405 6.10844445 Chilodonella uncinata 151077 SAR_Eukaryotes SAR_Eukaryotes 473 6.309999999999999e-129   NTclustered gi|110645063|gb|DQ665311.1| 151077 g17518 i0 93.189 53.9756097560976 323 20 87 2 2 323 884 1205 Chilodonella uncinata clone 1 elongation factor 1-alpha (EF-1alpha) gene, partial cds; macronuclear blastn 19917 473 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella uncinata
5710589 5710589 PRJNA635874_P_NODE_1925_length_878_cov_1.996273_g1812_i0 PRJNA635874 1925 878 1.996273 17.52727694 Chilodonella uncinata 151077 SAR_Eukaryotes SAR_Eukaryotes 1478 0   NTclustered gi|110645063|gb|DQ665311.1| 151077 g1812 i0 97.039 22.4555808656036 878 26 100 0 1 878 1123 246 Chilodonella uncinata clone 1 elongation factor 1-alpha (EF-1alpha) gene, partial cds; macronuclear blastn 19716 1478 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella uncinata
6258218 6258218 PRJNA635874_P_NODE_43985_length_257_cov_1.521739_g43838_i0 PRJNA635874 43985 257 1.521739 3.91086923 Chilodonella 151076 SAR_Eukaryotes SAR_Eukaryotes 100 8.23e-17   NTclustered gi|1389430804|gb|MH341632.1| 1654720 g43838 i0 95.238 0.735408560311284 63 3 25 0 1 63 3020 3082 Chilodonella piscicola strain SC large subunit ribosomal RNA gene, partial sequence blastn 189 100 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella piscicola
6986523 6986523 PRJNA635874_P_NODE_59446_length_246_cov_0.890173_g59299_i0 PRJNA635874 59446 246 0.890173 2.18982558 Tetrahymena thermophila 5911 SAR_Eukaryotes SAR_Eukaryotes 377 3.2300000000000003e-100   NTclustered gi|229594318|ref|XM_001030083.3| 312017 g59299 i0 94.65 0.98780487804878 243 13 99 0 4 246 360 118 Tetrahymena thermophila SB210 40S ribosomal protein S3 partial mRNA blastn 243 377 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena thermophila
8260694 8260694 PRJNA635874_P_NODE_39007_length_272_cov_1.175879_g38860_i0 PRJNA635874 39007 272 1.175879 3.19839088 Chilodonella uncinata 151077 SAR_Eukaryotes SAR_Eukaryotes 392 1.2899999999999997e-104   NTclustered gi|110645063|gb|DQ665311.1| 151077 g38860 i0 92.647 67.7169117647059 272 20 100 0 1 272 1095 824 Chilodonella uncinata clone 1 elongation factor 1-alpha (EF-1alpha) gene, partial cds; macronuclear blastn 18419 392 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella uncinata
9535987 9535987 PRJNA635874_P_NODE_38428_length_273_cov_2.850000_g38281_i0 PRJNA635874 38428 273 2.85 7.7805 Chilodonella uncinata 151077 SAR_Eukaryotes SAR_Eukaryotes 477 3.489999999999999e-130   NTclustered gi|300521444|gb|GQ377690.1| 151077 g38281 i0 98.168 1 273 5 100 0 1 273 456 184 Chilodonella uncinata 14-3-3 protein-like mRNA, partial sequence blastn 273 477 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella uncinata
10811991 10811991 PRJNA635874_P_NODE_49629_length_250_cov_0.870056_g49482_i0 PRJNA635874 49629 250 0.870056 2.17514 Tetmemena sp. Y1 1640447 SAR_Eukaryotes SAR_Eukaryotes 202 2.12e-47   NTclustered gi|1227052606|gb|KY038460.1| 1640447 g49482 i0 81.707 16.008 246 41 98 3 7 250 339 96 Tetmemena sp. Y1 heat shock protein 70 (hsp70) gene, partial cds; macronuclear blastn 4002 202 1 Eukaryota Sar   Ciliophora Spirotrichea Sporadotrichida Oxytrichidae Tetmemena Tetmemena sp. Y1
13361499 13361499 PRJNA635874_P_NODE_34411_length_286_cov_1.446009_g34264_i0 PRJNA635874 34411 286 1.446009 4.13558574 Chilodonella piscicola 1654720 SAR_Eukaryotes SAR_Eukaryotes 446 1.04e-120   NTclustered gi|1389430804|gb|MH341632.1| 1654720 g34264 i0 94.755 26.0874125874126 286 15 100 0 1 286 643 358 Chilodonella piscicola strain SC large subunit ribosomal RNA gene, partial sequence blastn 7461 446 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella piscicola
14636751 14636751 PRJNA635874_P_NODE_51912_length_249_cov_0.875000_g51765_i0 PRJNA635874 51912 249 0.875 2.17875 Tetrahymena thermophila 5911 SAR_Eukaryotes SAR_Eukaryotes 182 2.75e-41   NTclustered gi|829174585|ref|XM_001033134.3| 312017 g51765 i0 85.227 0.706827309236948 176 26 71 0 73 248 2198 2023 Tetrahymena thermophila SB210 26S proteasome regulatory complex, subunit RPN2 partial mRNA blastn 176 182 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena thermophila
18460441 18460441 PRJNA635874_P_NODE_74275_length_235_cov_3.030864_g74128_i0 PRJNA635874 74275 235 3.030864 7.1225304 Chilodonella uncinata 151077 SAR_Eukaryotes SAR_Eukaryotes 385 1.83e-102   NTclustered gi|300676719|gb|GQ377693.1| 151077 g74128 i0 96.17 3.61702127659574 235 9 100 0 1 235 256 22 Chilodonella uncinata gcr5-like mRNA, partial sequence blastn 850 385 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella uncinata
19733972 19733972 PRJNA635874_P_NODE_32936_length_291_cov_1.412844_g32789_i0 PRJNA635874 32936 291 1.412844 4.11137604 Chilodonella uncinata 151077 SAR_Eukaryotes SAR_Eukaryotes 444 3.8099999999999997e-120   NTclustered gi|300676719|gb|GQ377693.1| 151077 g32789 i0 94.158 1 291 17 100 0 1 291 367 657 Chilodonella uncinata gcr5-like mRNA, partial sequence blastn 291 444 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella uncinata
21010017 21010017 PRJNA635874_P_NODE_44217_length_256_cov_1.683060_g44070_i0 PRJNA635874 44217 256 1.68306 4.3086336 Tetrahymena thermophila 5911 SAR_Eukaryotes SAR_Eukaryotes 128 3.76e-25   NTclustered gi|829175027|ref|XM_001017808.4| 312017 g44070 i0 87.611 0.44140625 113 11 44 3 132 243 155 45 Tetrahymena thermophila SB210 hypothetical protein partial mRNA blastn 113 128 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena thermophila
21556591 21556591 PRJNA635874_P_NODE_54517_length_248_cov_0.880000_g54370_i0 PRJNA635874 54517 248 0.88 2.1824 Tetrahymena 5890 SAR_Eukaryotes SAR_Eukaryotes 115 2.82e-21   NTclustered gi|3366652|gb|AF031320.1|AF031320 5911 g54370 i0 75.397 2.03225806451613 252 54 100 7 1 248 1067 820 Tetrahymena thermophila granule lattice protein 4 precursor (GRL4) mRNA, complete cds blastn 504 115 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena thermophila
22284474 22284474 PRJNA635874_P_NODE_36518_length_280_cov_0.864734_g36371_i0 PRJNA635874 36518 280 0.864734 2.4212552 Colpoda sp. 41631 SAR_Eukaryotes SAR_Eukaryotes 418 2.21e-112   NTclustered gi|2651357791|gb|PP174306.1| 41631 g36371 i0 93.594 92.4 281 16 100 2 1 280 3184 3463 Colpoda sp. isolate JGP15 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 25872 418 1 Eukaryota Sar   Ciliophora Colpodea Colpodida Colpodidae Colpoda Colpoda sp.
23559403 23559403 PRJNA635874_P_NODE_15419_length_389_cov_1.455696_g15272_i0 PRJNA635874 15419 389 1.455696 5.66265744 Tetrahymena pyriformis 5908 SAR_Eukaryotes SAR_Eukaryotes 597 3.8099999999999986e-166   NTclustered gi|5701724|dbj|AB024694.1| 5908 g15272 i0 94.344 3.2133676092545 389 22 100 0 1 389 635 247 Tetrahymena pyriformis mRNA for 14-3-3 protein, complete cds blastn 1250 597 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena pyriformis
23560396 23560396 PRJNA635874_P_NODE_50259_length_250_cov_0.870056_g50112_i0 PRJNA635874 50259 250 0.870056 2.17514 Tetrahymena thermophila 5911 SAR_Eukaryotes SAR_Eukaryotes 115 2.85e-21   NTclustered gi|829192014|ref|XM_012799966.1| 312017 g50112 i0 88.421 1.68 95 11 38 0 48 142 125 219 Tetrahymena thermophila SB210 hypothetical protein partial mRNA blastn 420 115 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena thermophila
23560644 23560644 PRJNA635874_P_NODE_61699_length_245_cov_0.895349_g61552_i0 PRJNA635874 61699 245 0.895349 2.19360505 Tetrahymena pyriformis 5908 SAR_Eukaryotes SAR_Eukaryotes 398 2.47e-106   NTclustered gi|10765|emb|X05195.1| 5908 g61552 i0 96.266 70.734693877551 241 9 98 0 1 241 843 1083 Tetrahymena pyriformis actin gene blastn 17330 398 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena pyriformis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;