RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA635874" and tax_kingdom = "Methanobacteriati"

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tax_superkingdom 1

tax_kingdom 1

  • Methanobacteriati · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA635874 · 2 ✖

analysis 1

  • blastn · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
19735013 19735013 PRJNA635874_P_NODE_73476_length_241_cov_0.916667_g73329_i0 PRJNA635874 73476 241 0.916667 2.20916747 Salarchaeum japonicum 555573 Archaea Archaea 54.7 0.006   NTclustered gi|2124061129|gb|CP085324.1| 555573 g73329 i0 94.286 0.261410788381743 35 2 15 0 102 136 271608 271574 Salarchaeum japonicum strain JCM 16327 chromosome, complete genome blastn 63 54.7 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Halobacteriaceae Salarchaeum Salarchaeum japonicum
22285022 22285022 PRJNA635874_P_NODE_57558_length_247_cov_0.885057_g57411_i0 PRJNA635874 57558 247 0.885057 2.18609079 Thermoplasmata archaeon 1906666 Archaea Archaea 52.8 0.022   NTclustered gi|2108430933|gb|CP070629.1| 1906666 g57411 i0 96.875 0.129554655870445 32 0 13 1 139 169 1119210 1119179 MAG: Thermoplasmata archaeon isolate bin983 chromosome blastn 32 52.8 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata       Thermoplasmata archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;