RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "blastn", bioproject = "PRJNA635874" and tax_clade = "Cyanobacteriota/Melainabacteria group"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • Cyanobacteriota/Melainabacteria group · 4 ✖

bioproject 1

  • PRJNA635874 · 4 ✖

analysis 1

  • blastn · 4 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
607852 607852 PRJNA635874_P_NODE_53701_length_248_cov_0.880000_g53554_i0 PRJNA635874 53701 248 0.88 2.1824 Nodularia sphaerocarpa 137816 Bacteria Bacteria 285 2.0299999999999997e-72   NTclustered gi|2198613447|gb|CP060140.1| 2761619 g53554 i0 87.705 3.94758064516129 244 30 98 0 5 248 1529893 1529650 Nodularia sphaerocarpa UHCC 0038 chromosome, complete genome blastn 979 285 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Cyanobacteriota Cyanophyceae Nostocales Nodulariaceae Nodularia Nodularia sphaerocarpa
19733862 19733862 PRJNA635874_P_NODE_29096_length_306_cov_1.321888_g28949_i0 PRJNA635874 29096 306 1.321888 4.04497728 Scytonema sp. HKAR-10 2746664 Bacteria Bacteria 560 3.84e-155   NTclustered gi|1859675731|gb|MT644506.1| 2746664 g28949 i0 99.673 99.640522875817 306 1 100 0 1 306 715 410 Scytonema sp. HKAR-10 16S ribosomal RNA gene, partial sequence blastn 30490 560 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Cyanobacteriota Cyanophyceae Nostocales Scytonemataceae Scytonema Scytonema sp. HKAR-10
23560422 23560422 PRJNA635874_P_NODE_51619_length_249_cov_0.875000_g51472_i0 PRJNA635874 51619 249 0.875 2.17875 Scytonema hofmannii 34078 Bacteria Bacteria 379 9.1e-101   NTclustered gi|146740650|emb|AM709637.1| 128403 g51472 i0 94.628 208.152610441767 242 12 97 1 1 241 2250 2009 Scytonema hofmanni PCC 7110 partial ribosomal RNA operon, strain PCC 7110 blastn 51830 379 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Cyanobacteriota Cyanophyceae Nostocales Scytonemataceae Scytonema Scytonema hofmannii
24834515 24834515 PRJNA635874_P_NODE_68360_length_243_cov_0.905882_g68213_i0 PRJNA635874 68360 243 0.905882 2.20129326 Leptolyngbya sp. BL0902 1115757 Bacteria Bacteria 52.8 0.022   NTclustered gi|1949996095|gb|CP046155.1| 1115757 g68213 i0 100 0.11522633744856 28 0 12 0 36 63 3964594 3964567 Leptolyngbya sp. BL0902 chromosome, complete genome blastn 28 52.8 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Cyanobacteriota Cyanophyceae Leptolyngbyales Leptolyngbyaceae Leptolyngbya Leptolyngbya sp. BL0902

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;