RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA635397" and tax_phylum = "Echinodermata"

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tax_superkingdom 1

tax_phylum 1

  • Echinodermata · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA635397 · 3 ✖

analysis 1

  • blastn · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
19732091 19732091 PRJNA635397_P_NODE_14316_length_441_cov_2.796196_g13862_i0 PRJNA635397 14316 441 2.796196 12.33122436 Acanthaster planci 133434 Echinodermata other_Eukaryota 54.7 0.012   NTclustered gi|1229162738|ref|XM_022238657.1| 133434 g13862 i0 100 0.192743764172336 29 0 7 0 172 200 1571 1543 PREDICTED: Acanthaster planci nucleolar protein 56-like (LOC110981250), transcript variant X2, mRNA blastn 85 54.7 1 Eukaryota Opisthokonta Metazoa Echinodermata Asteroidea Valvatida Acanthasteridae Acanthaster Acanthaster planci
23558436 23558436 PRJNA635397_P_NODE_34459_length_270_cov_1.137056_g34005_i0 PRJNA635397 34459 270 1.137056 3.0700512 Acanthaster planci 133434 Echinodermata other_Eukaryota 52.8 0.025   NTclustered gi|1229143600|ref|XM_022228359.1| 133434 g34005 i0 100 0.207407407407407 28 0 10 0 238 265 293 320 PREDICTED: Acanthaster planci anillin-like (LOC110975676), transcript variant X2, mRNA blastn 56 52.8 1 Eukaryota Opisthokonta Metazoa Echinodermata Asteroidea Valvatida Acanthasteridae Acanthaster Acanthaster planci
23558515 23558515 PRJNA635397_P_NODE_3979_length_987_cov_2.685996_g3632_i0 PRJNA635397 3979 987 2.685996 26.51078052 Lytechinus pictus 7653 Echinodermata other_Eukaryota 56.5 0.008   NTclustered gi|2707454390|ref|XM_064106775.1| 7653 g3632 i0 100 0.0303951367781155 30 0 3 0 65 94 2876 2905 PREDICTED: Lytechinus pictus uncharacterized LOC129271452 (LOC129271452), mRNA blastn 30 56.5 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Temnopleuroida Toxopneustidae Lytechinus Lytechinus pictus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;