RNAquarium Metadata Server
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contig_metadata

8 rows where analysis = "blastn", bioproject = "PRJNA635397" and tax_phylum = "Ciliophora"

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tax_superkingdom 1

tax_phylum 1

  • Ciliophora · 8 ✖

tax_clade 1

bioproject 1

  • PRJNA635397 · 8 ✖

analysis 1

  • blastn · 8 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3705319 3705319 PRJNA635397_P_NODE_22163_length_341_cov_1.716418_g21709_i0 PRJNA635397 22163 341 1.716418 5.85298538 Chilodonella 151076 SAR_Eukaryotes SAR_Eukaryotes 204 8.41e-48   NTclustered gi|1389430804|gb|MH341632.1| 1654720 g21709 i0 97.479 1.83870967741935 119 3 35 0 223 341 3082 2964 Chilodonella piscicola strain SC large subunit ribosomal RNA gene, partial sequence blastn 627 204 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella piscicola
4433386 4433386 PRJNA635397_P_NODE_24984_length_320_cov_0.894737_g24530_i0 PRJNA635397 24984 320 0.894737 2.8631584 Chilodonella uncinata 151077 SAR_Eukaryotes SAR_Eukaryotes 342 1.59e-89   NTclustered gi|390195606|gb|JX112363.1| 151077 g24530 i0 85.938 38.990625 320 45 100 0 1 320 556 237 Chilodonella uncinata strain USA_SC2 beta-tubulin (Btub) gene, partial cds; macronuclear blastn 12477 342 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella uncinata
5709168 5709168 PRJNA635397_P_NODE_17445_length_391_cov_2.459119_g16991_i0 PRJNA635397 17445 391 2.459119 9.61515529 Chilodonella uncinata 151077 SAR_Eukaryotes SAR_Eukaryotes 540 6.54e-149   NTclustered gi|300676719|gb|GQ377693.1| 151077 g16991 i0 91.56 10.4398976982097 391 33 100 0 1 391 504 114 Chilodonella uncinata gcr5-like mRNA, partial sequence blastn 4082 540 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella uncinata
12085328 12085328 PRJNA635397_P_NODE_41330_length_249_cov_0.886364_g40876_i0 PRJNA635397 41330 249 0.886364 2.20704636 Chilodonella uncinata 151077 SAR_Eukaryotes SAR_Eukaryotes 169 2.1399999999999996e-37   NTclustered gi|662862632|gb|KJ000271.1| 151077 g40876 i0 91.129 1.55020080321285 124 11 50 0 35 158 674 797 Chilodonella uncinata strain USA_SC2 clone P4 protein kinase domain containing protein gene, partial cds; macronuclear blastn 386 169 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella uncinata
15908297 15908297 PRJNA635397_P_NODE_15273_length_424_cov_2.307692_g14819_i0 PRJNA635397 15273 424 2.307692 9.78461408 Chilodonella uncinata 151077 SAR_Eukaryotes SAR_Eukaryotes 623 6.9e-174   NTclustered gi|301014695|gb|GQ377692.1| 151077 g14819 i0 93.16 60.5188679245283 424 29 100 0 1 424 460 37 Chilodonella uncinata ribosomal protein S23a-like (rps23a) mRNA, complete sequence blastn 25660 623 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella uncinata
16456414 16456414 PRJNA635397_P_NODE_33373_length_274_cov_2.094527_g32919_i0 PRJNA635397 33373 274 2.094527 5.73900398 Chilodonella 151076 SAR_Eukaryotes SAR_Eukaryotes 460 3.53e-125   NTclustered gi|1389430804|gb|MH341632.1| 1654720 g32919 i0 98.106 60.492700729927 264 5 96 0 8 271 503 240 Chilodonella piscicola strain SC large subunit ribosomal RNA gene, partial sequence blastn 16575 460 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella piscicola
19732148 19732148 PRJNA635397_P_NODE_17616_length_389_cov_1.955696_g17162_i0 PRJNA635397 17616 389 1.955696 7.60765744 Chilodonella uncinata 151077 SAR_Eukaryotes SAR_Eukaryotes 575 1.7799999999999995e-159   NTclustered gi|158347525|gb|EU047814.1| 151077 g17162 i0 93.316 100.056555269923 389 26 100 0 1 389 2 390 Chilodonella uncinata clone Shared_P1 beta-tubulin gene, partial cds; macronuclear blastn 38922 575 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella uncinata
24831833 24831833 PRJNA635397_P_NODE_16800_length_400_cov_2.183486_g16346_i0 PRJNA635397 16800 400 2.183486 8.733944 Chilodonella uncinata 151077 SAR_Eukaryotes SAR_Eukaryotes 632 1.0799999999999996e-176   NTclustered gi|300676714|gb|GQ377691.1| 151077 g16346 i0 95.238 10.15 399 19 99 0 2 400 424 26 Chilodonella uncinata rps22a (rps22a) mRNA, complete cds blastn 4060 632 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella uncinata

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;