RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA633835" and tax_clade = "FCB group"

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tax_superkingdom 1

tax_kingdom 1

tax_clade 1

  • FCB group · 2 ✖

bioproject 1

  • PRJNA633835 · 2 ✖

analysis 1

  • blastn · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
8256984 8256984 PRJNA633835_S_NODE_3607_length_343_cov_0.892593_g3539_i0 PRJNA633835 3607 343 0.892593 3.06159399 uncultured Saccharicrinis sp. 1618115 Bacteria Bacteria 52.8 0.032   NTclustered gi|2621705959|emb|OY764021.1| 1618115 g3539 i0 100 0.0816326530612245 28 0 8 0 214 241 3041714 3041741 MAG: uncultured Saccharicrinis sp. isolate f927af63-5116-48d7-ac25-05da7cc028b4 genome assembly, chromosome: 2 blastn 28 52.8 1 Bacteria FCB group Pseudomonadati Bacteroidota Bacteroidia Marinilabiliales Marinilabiliaceae Saccharicrinis uncultured Saccharicrinis sp.
14632727 14632727 PRJNA633835_S_NODE_11152_length_245_cov_0.895349_g11084_i0 PRJNA633835 11152 245 0.895349 2.19360505 Candidatus Cloacimonadales bacterium 3060593 Bacteria Bacteria 52.8 0.022   NTclustered gi|2621706016|emb|OY764078.1| 3060593 g11084 i0 100 0.228571428571429 28 0 11 0 119 146 286831 286804 MAG: Candidatus Cloacimonadales bacterium isolate 02056a20-4ec6-4ab0-ab2d-03f0ed9894bb genome assembly, chromosome: 1 blastn 56 52.8 1 Bacteria FCB group Pseudomonadati Candidatus Cloacimonadota Candidatus Cloacimonadia Candidatus Cloacimonadales     Candidatus Cloacimonadales bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;