RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA631796" and tax_superkingdom = "Archaea"

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tax_superkingdom 1

  • Archaea · 2 ✖

bioproject 1

  • PRJNA631796 · 2 ✖

analysis 1

  • blastn · 2 ✖

tax_phylum 0

tax_kingdom 0

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
13357572 13357572 PRJNA631796_P_NODE_2831_length_420_cov_1.715877_g2554_i0 PRJNA631796 2831 420 1.715877 7.2066834 uncultured archaeon 115547 Archaea Archaea 689 0   NTclustered gi|261280304|gb|GQ906603.1| 115547 g2554 i0 96.217 99.7309523809524 423 13 100 3 1 420 15 437 Uncultured archaeon clone CFS-D05 16S ribosomal RNA gene, partial sequence blastn 41887 689 1 Archaea               uncultured archaeon
13905962 13905962 PRJNA631796_P_NODE_8591_length_233_cov_0.965116_g8313_i0 PRJNA631796 8591 233 0.965116 2.24872028 Archaea 2157 Archaea Archaea 75 4.45e-9   NTclustered gi|765560199|gb|KP308700.1| 115547 g8313 i0 90.909 2.39055793991416 55 5 24 0 16 70 3119 3173 Uncultured archaeon clone RBG_16_scaffold_36611 genomic sequence blastn 557 75 1 Archaea               uncultured archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;