RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA631796" and tax_phylum = "Mucoromycota"

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tax_superkingdom 1

tax_phylum 1

  • Mucoromycota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA631796 · 2 ✖

analysis 1

  • blastn · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2427249 2427249 PRJNA631796_P_NODE_10562_length_213_cov_0.921053_g10284_i0 PRJNA631796 10562 213 0.921053 1.96184289 Fungi 4751 Fungi Fungi 75 4e-9   NTclustered gi|658131668|emb|HF968994.1| 588596 g10284 i0 78.226 3.71830985915493 124 21 56 6 79 198 1507 1628 Rhizophagus irregularis partial 28S rRNA gene, strain DAOM229456, isolate spore 2, clone 03L2_7_14 blastn 792 75 1 Eukaryota Opisthokonta Fungi Mucoromycota Glomeromycetes Glomerales Glomeraceae Rhizophagus Rhizophagus irregularis
15906194 15906194 PRJNA631796_P_NODE_11533_length_207_cov_0.876712_g11255_i0 PRJNA631796 11533 207 0.876712 1.81479384 Cokeromyces recurvatus 90255 Fungi Fungi 143 1.04e-29   NTclustered gi|2324061315|ref|XM_051526675.1| 90255 g11255 i0 82.143 3.85990338164251 168 28 81 2 6 172 254 88 Cokeromyces recurvatus ras-like protein 1 (BX663DRAFT_502877), mRNA blastn 799 143 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Mucoraceae Cokeromyces Cokeromyces recurvatus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;