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contig_metadata

23 rows where analysis = "blastn", bioproject = "PRJNA631796" and tax_clade = "Sar"

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tax_phylum 2

tax_superkingdom 1

tax_clade 1

  • Sar · 23 ✖

bioproject 1

  • PRJNA631796 · 23 ✖

analysis 1

  • blastn · 23 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
603340 603340 PRJNA631796_P_NODE_14241_length_176_cov_4.269565_g13963_i0 PRJNA631796 14241 176 4.269565 7.5144344 Saprolegnia parasitica 101203 SAR_Eukaryotes SAR_Eukaryotes 220 3.85e-53   NTclustered gi|813199067|ref|XR_001099866.1| 695850 g13963 i0 89.714 36.4829545454545 175 14 98 4 4 176 1665 1493 Saprolegnia parasitica CBS 223.65 28S ribosomal RNA rRNA blastn 6421 220 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Saprolegniaceae Saprolegnia Saprolegnia parasitica
1152036 1152036 PRJNA631796_P_NODE_6441_length_270_cov_1.751196_g6163_i0 PRJNA631796 6441 270 1.751196 4.7282292 Peronosporaceae 4777 SAR_Eukaryotes SAR_Eukaryotes 486 5.7199999999999984e-133   NTclustered gi|1233046848|gb|KX252659.1| 78236 g6163 i0 99.257 99.7148148148148 269 2 99 0 2 270 427 159 Phytophthora quercina isolate 30A5(ex-type) 28S ribosomal RNA gene, partial sequence blastn 26923 486 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora quercina
1879576 1879576 PRJNA631796_P_NODE_8702_length_231_cov_3.741176_g8424_i0 PRJNA631796 8702 231 3.741176 8.64211656 Opisthonecta sp. FG-2015 1607889 SAR_Eukaryotes SAR_Eukaryotes 416 6.349999999999998e-112   NTclustered gi|759083562|gb|KM222179.1| 1607889 g8424 i0 99.134 95.3636363636364 231 2 100 0 1 231 370 140 Opisthonecta sp. FG-2015 voucher SZ2011052301 large subunit ribosomal RNA gene, partial sequence blastn 22029 416 1 Eukaryota Sar   Ciliophora Oligohymenophorea Sessilida Opisthonectidae Opisthonecta Opisthonecta sp. FG-2015
3703704 3703704 PRJNA631796_P_NODE_8643_length_232_cov_1.701754_g8365_i0 PRJNA631796 8643 232 1.701754 3.94806928 Vitrellaceae 2605696 SAR_Eukaryotes SAR_Eukaryotes 69.4 2.06e-7   NTclustered gi|2554484921|ref|NC_080886.1| 1440115 g8365 i0 93.478 13.8663793103448 46 3 20 0 28 73 41661 41706 Paralagenidium karlingii isolate 19-09020 mitochondrion, complete genome blastn 3217 69.4 1 Eukaryota Sar   Oomycota Peronosporomycetes     Paralagenidium Paralagenidium karlingii
4431182 4431182 PRJNA631796_S_NODE_6384_length_323_cov_1.332061_g6217_i0 PRJNA631796 6384 323 1.332061 4.30255703 Phytopythium vexans 907947 SAR_Eukaryotes SAR_Eukaryotes 313 1.26e-80   NTclustered gi|2248513842|ref|NC_063815.1| 907947 g6217 i0 87.636 97.7244582043344 275 26 84 6 52 323 2539 2270 Phytopythium vexans culture CBS:119.80 mitochondrion, complete genome blastn 31565 313 1 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Phytopythium Phytopythium vexans
5707044 5707044 PRJNA631796_P_NODE_9465_length_223_cov_2.259259_g9187_i0 PRJNA631796 9465 223 2.259259 5.03814757 Peronospora effusa 542832 SAR_Eukaryotes SAR_Eukaryotes 390 3.689999999999999e-104   NTclustered gi|1534885766|gb|MH142315.1| 542832 g9187 i0 98.206 102.004484304933 223 4 100 0 1 223 1010 788 Peronospora effusa isolate R13 mitochondrion, complete genome blastn 22747 390 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Peronospora Peronospora effusa
8256554 8256554 PRJNA631796_P_NODE_2487_length_450_cov_3.105398_g2211_i0 PRJNA631796 2487 450 3.105398 13.974291 Synura synuroidea 47573 SAR_Eukaryotes SAR_Eukaryotes 333 1.39e-86   NTclustered gi|11466457|ref|NC_002174.1| 47573 g2211 i0 81.166 95.1844444444444 446 57 97 19 14 450 572 999 Chrysodidymus synuroideus mitochondrion, complete genome blastn 42833 333 1 Eukaryota Sar     Synurophyceae Synurales Mallomonadaceae Synura Synura synuroidea
8256635 8256635 PRJNA631796_S_NODE_45547_length_235_cov_1.310345_g45380_i0 PRJNA631796 45547 235 1.310345 3.07931075 Aphanomyces invadans 157072 SAR_Eukaryotes SAR_Eukaryotes 158 4.34e-34   NTclustered gi|1111669769|ref|NC_032052.1| 157072 g45380 i0 82.105 155.914893617021 190 29 80 5 49 235 1419 1232 Aphanomyces invadans isolate NJM9701 mitochondrion, complete genome blastn 36640 158 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces invadans
8805007 8805007 PRJNA631796_S_NODE_1367_length_489_cov_5.455607_g1200_i0 PRJNA631796 1367 489 5.455607 26.67791823 root 1 Root_unresolved Root_unresolved 863 0   NTclustered gi|613433395|gb|KJ410683.1| 145522 g1200 i0 98.963 171.742331288344 482 5 99 0 8 489 65430 64949 Nannochloropsis oceanica strain LAMB0001 chloroplast, partial genome blastn 83982 863 1 Eukaryota Sar     Eustigmatophyceae Eustigmatales Monodopsidaceae Nannochloropsis Nannochloropsis oceanica
9531909 9531909 PRJNA631796_P_NODE_5208_length_302_cov_2.697095_g4930_i0 PRJNA631796 5208 302 2.697095 8.1452269 Peronospora effusa 542832 SAR_Eukaryotes SAR_Eukaryotes 542 1.37e-149   NTclustered gi|1534885766|gb|MH142315.1| 542832 g4930 i0 99.007 100.629139072848 302 3 100 0 1 302 503 804 Peronospora effusa isolate R13 mitochondrion, complete genome blastn 30390 542 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Peronospora Peronospora effusa
10080454 10080454 PRJNA631796_P_NODE_10368_length_214_cov_3.509804_g10090_i0 PRJNA631796 10368 214 3.509804 7.51098056 Peronospora 70742 SAR_Eukaryotes SAR_Eukaryotes 368 1.65e-97   NTclustered gi|827085599|gb|KM058092.1| 120572 g10090 i0 97.664 100.355140186916 214 5 100 0 1 214 433 646 Peronospora bulbocapni isolate HV7 28S ribosomal RNA gene, partial sequence blastn 21476 368 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Peronospora Peronospora bulbocapni
13905920 13905920 PRJNA631796_P_NODE_11971_length_205_cov_1.340278_g11693_i0 PRJNA631796 11971 205 1.340278 2.7475699 Peronospora 70742 SAR_Eukaryotes SAR_Eukaryotes 351 1.58e-92   NTclustered gi|1663822452|gb|MH730824.1| 120412 g11693 i0 97.561 100.00487804878 205 5 100 0 1 205 380 584 Peronospora ficariae voucher GLM63033 28S ribosomal RNA gene, partial sequence blastn 20501 351 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Peronospora Peronospora ficariae
14632329 14632329 PRJNA631796_P_NODE_4152_length_341_cov_1.364286_g3874_i0 PRJNA631796 4152 341 1.364286 4.65221526 uncultured stramenopile 152704 SAR_Eukaryotes SAR_Eukaryotes 608 1.5199999999999993e-169   NTclustered gi|40787136|gb|AY496523.1| 152704 g3874 i0 98.827 101.533724340176 341 4 100 0 1 341 381 41 Uncultured stramenopile clone ND-58 18S ribosomal RNA gene, partial sequence blastn 34623 608 1 Eukaryota Sar             uncultured stramenopile
14632358 14632358 PRJNA631796_P_NODE_9172_length_226_cov_3.254545_g8894_i0 PRJNA631796 9172 226 3.254545 7.3552717 Gertia stigmatica 2676190 SAR_Eukaryotes SAR_Eukaryotes 121 5.44e-23   NTclustered gi|1777430530|dbj|LC490696.1| 2676190 g8894 i0 87.619 45.7964601769912 105 11 46 2 1 104 3327 3224 Gertia stigmatica mdd472-kt genes for 18S rRNA, ITS1, 5.8S rRNA, ITS2, 28S rRNA, partial and complete sequence blastn 10350 121 1 Eukaryota Sar     Dinophyceae Gymnodiniales Kareniaceae Gertia Gertia stigmatica
15906261 15906261 PRJNA631796_P_NODE_9493_length_223_cov_1.432099_g9215_i0 PRJNA631796 9493 223 1.432099 3.19358077 Phytophthora sojae 67593 SAR_Eukaryotes SAR_Eukaryotes 379 7.999999999999999e-101   NTclustered gi|695467811|ref|XM_009541420.1| 67593 g9215 i0 97.309 84.6681614349776 223 6 100 0 1 223 16 238 Phytophthora sojae hypothetical protein mRNA blastn 18881 379 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora sojae
16454776 16454776 PRJNA631796_P_NODE_13133_length_201_cov_0.914286_g12855_i0 PRJNA631796 13133 201 0.914286 1.83771486 Aphanomyces 100860 SAR_Eukaryotes SAR_Eukaryotes 300 5.65e-77   NTclustered gi|363498776|gb|JN662487.1| 120398 g12855 i0 93.532 100.741293532338 201 13 100 0 1 201 710 510 Aphanomyces stellatus strain GF 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 20249 300 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces stellatus
17729872 17729872 PRJNA631796_P_NODE_11654_length_206_cov_2.558621_g11376_i0 PRJNA631796 11654 206 2.558621 5.27075926 root 1 Root_unresolved Root_unresolved 381 2.0199999999999994e-101   NTclustered gi|363412127|gb|JN120201.1| 6026 g11376 i0 100 100.004854368932 206 0 100 0 1 206 969 764 Opisthonecta henneguyi isolate 43Opisthonectau1S1S2 18S ribosomal RNA gene, partial sequence blastn 20601 381 1 Eukaryota Sar   Ciliophora Oligohymenophorea Sessilida Opisthonectidae Opisthonecta Opisthonecta henneguyi
17729911 17729911 PRJNA631796_P_NODE_5794_length_286_cov_3.657778_g5516_i0 PRJNA631796 5794 286 3.657778 10.46124508 Aphanomyces 100860 SAR_Eukaryotes SAR_Eukaryotes 496 1.02e-135   NTclustered gi|363498776|gb|JN662487.1| 120398 g5516 i0 97.902 90.3671328671329 286 6 100 0 1 286 366 651 Aphanomyces stellatus strain GF 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 25845 501 0.99001996007984 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces stellatus
19003448 19003448 PRJNA631796_P_NODE_12455_length_203_cov_2.345070_g12177_i0 PRJNA631796 12455 203 2.34507 4.7604921 Peronosporaceae 4777 SAR_Eukaryotes SAR_Eukaryotes 350 5.6e-92   NTclustered gi|1238821298|ref|NC_035725.1| 4792 g12177 i0 98.01 99.0197044334975 201 4 99 0 1 201 4927 5127 Phytophthora nicotianae mitochondrion, complete genome blastn 20101 353 0.991501416430595 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora nicotianae
19003508 19003508 PRJNA631796_S_NODE_123275_length_202_cov_0.907801_g123108_i0 PRJNA631796 123275 202 0.907801 1.83375802 Saprolegniales 4763 SAR_Eukaryotes SAR_Eukaryotes 329 7.25e-86   NTclustered gi|50261276|ref|NC_005984.1| 4770 g123108 i0 96.059 104.445544554455 203 7 100 1 1 202 9120 9322 Saprolegnia ferax mitochondrion, complete genome blastn 21098 331 0.993957703927492 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Saprolegniaceae Saprolegnia Saprolegnia ferax
21005833 21005833 PRJNA631796_P_NODE_9457_length_223_cov_2.703704_g9179_i0 PRJNA631796 9457 223 2.703704 6.02925992 Albugo laibachii 653948 SAR_Eukaryotes SAR_Eukaryotes 211 3.09e-50   NTclustered gi|325194231|emb|FR825088.1| 890382 g9179 i0 85.577 1.13004484304933 208 23 91 7 1 204 602 806 Albugo laibachii Nc14, genomic contig CONTIG_1612_NC14_v4_1853_85 blastn 252 211 1 Eukaryota Sar   Oomycota Peronosporomycetes Albuginales Albuginaceae Albugo Albugo laibachii
24829673 24829673 PRJNA631796_P_NODE_4360_length_332_cov_1.634686_g4082_i0 PRJNA631796 4360 332 1.634686 5.42715752 Chattonella marina 90936 SAR_Eukaryotes SAR_Eukaryotes 259 1.72e-64   NTclustered gi|219687517|dbj|AB445435.1| 859642 g4082 i0 80.952 100.406626506024 336 56 100 7 1 332 123 454 Chattonella marina var. antiqua mitochondrial cox1 pseudogene for cytochrome c oxidase subunit 1, strain: DEM-141 blastn 33335 259 1 Eukaryota Sar     Raphidophyceae Chattonellales Chattonellaceae Chattonella Chattonella marina
24829737 24829737 PRJNA631796_S_NODE_7280_length_315_cov_4.181102_g7113_i0 PRJNA631796 7280 315 4.181102 13.1704713 Nothophytophthora sp. 2853999 SAR_Eukaryotes SAR_Eukaryotes 156 2.18e-33   NTclustered gi|2240249467|gb|MW648547.1| 2853999 g7113 i0 84.524 11.1460317460317 168 14 53 7 99 264 495 652 Nothophytophthora sp. culture ICMP:18719 mitochondrion, complete genome blastn 3511 156 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Nothophytophthora Nothophytophthora sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;