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contig_metadata

23 rows where analysis = "blastn", bioproject = "PRJNA631119" and tax_superkingdom = "Viruses"

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tax_superkingdom 1

  • Viruses · 23 ✖

bioproject 1

  • PRJNA631119 · 23 ✖

analysis 1

  • blastn · 23 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1151835 1151835 PRJNA631119_P_NODE_20701_length_293_cov_1.645455_g20583_i0 PRJNA631119 20701 293 1.645455 4.82118315 Orthorubulavirus 2560195 Viruses Viruses 542 1.32e-149   NTclustered gi|1394370381|gb|MH362816.1| 2560580 g20583 i0 100 64 293 0 100 0 1 293 15036 14744 Mammalian orthorubulavirus 5 strain CAN, complete genome blastn 18752 542 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Paramyxoviridae Orthorubulavirus Orthorubulavirus mammalis
2427027 2427027 PRJNA631119_P_NODE_13742_length_340_cov_2.531835_g13624_i0 PRJNA631119 13742 340 2.531835 8.608239 Paramyxoviridae 11158 Viruses Viruses 614 3.2699999999999995e-171   NTclustered gi|2721617856|gb|PP711545.1| 251774 g13624 i0 99.408 67.6 338 2 99 0 1 338 2757 3094 Porcine parainfluenza virus isolate PPIV-DX-Gansu-2020, partial genome blastn 22984 614 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Paramyxoviridae Rubulavirus Porcine parainfluenza virus
2427174 2427174 PRJNA631119_P_NODE_3502_length_588_cov_2.252427_g3390_i0 PRJNA631119 3502 588 2.252427 13.24427076 Paramyxoviridae 11158 Viruses Viruses 1075 0   NTclustered gi|2721617856|gb|PP711545.1| 251774 g3390 i0 99.66 97 588 2 100 0 1 588 4275 4862 Porcine parainfluenza virus isolate PPIV-DX-Gansu-2020, partial genome blastn 57036 1081 0.994449583718779 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Paramyxoviridae Rubulavirus Porcine parainfluenza virus
3154004 3154004 PRJNA631119_P_NODE_10363_length_378_cov_0.924590_g10245_i0 PRJNA631119 10363 378 0.92459 3.4949502 Staphylococcus phage MarsHill 2796499 Viruses Viruses 52.8 0.036   NTclustered gi|1953870784|gb|MW248466.1| 2796499 g10245 i0 96.875 0.0846560846560847 32 0 8 1 176 206 24811 24780 Staphylococcus phage MarsHill, complete genome blastn 32 52.8 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Staphylococcus phage MarsHill
3154138 3154138 PRJNA631119_P_NODE_34703_length_246_cov_1.699422_g34585_i0 PRJNA631119 34703 246 1.699422 4.18057812 Lentivirus humimdef1 3418650 Viruses Viruses 52.8 0.022   NTclustered gi|1815516747|gb|MT008126.1| 11676 g34585 i0 100 0.227642276422764 28 0 11 0 14 41 515 488 HIV-1 isolate NICED-1419 from India pol protein (pol) and gag protein (gag) genes, partial cds blastn 56 52.8 1 Viruses   Pararnavirae Artverviricota Revtraviricetes Ortervirales Retroviridae Lentivirus Lentivirus humimdef1
4980195 4980195 PRJNA631119_P_NODE_9244_length_395_cov_1.416149_g9126_i0 PRJNA631119 9244 395 1.416149 5.59378855 Paramyxoviridae 11158 Viruses Viruses 730 0   NTclustered gi|2721617856|gb|PP711545.1| 251774 g9126 i0 100 68 395 0 100 0 1 395 2783 2389 Porcine parainfluenza virus isolate PPIV-DX-Gansu-2020, partial genome blastn 26860 730 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Paramyxoviridae Rubulavirus Porcine parainfluenza virus
6255600 6255600 PRJNA631119_P_NODE_40485_length_230_cov_2.687898_g40367_i0 PRJNA631119 40485 230 2.687898 6.1821654 Orthorubulavirus 2560195 Viruses Viruses 411 2.939999999999999e-110   NTclustered gi|2449300967|gb|ON241249.1| 2560580 g40367 i0 99.123 51.5782608695652 228 2 99 0 3 230 6450 6223 Mammalian orthorubulavirus 5 isolate ATCC HTB-55 batch no 70037771, complete genome blastn 11863 411 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Paramyxoviridae Orthorubulavirus Orthorubulavirus mammalis
6981692 6981692 PRJNA631119_P_NODE_31606_length_250_cov_1.288136_g31488_i0 PRJNA631119 31606 250 1.288136 3.22034 Orthorubulavirus mammalis 3052558 Viruses Viruses 462 8.83e-126   NTclustered gi|2449300967|gb|ON241249.1| 2560580 g31488 i0 100 83.896 250 0 100 0 1 250 529 778 Mammalian orthorubulavirus 5 isolate ATCC HTB-55 batch no 70037771, complete genome blastn 20974 462 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Paramyxoviridae Orthorubulavirus Orthorubulavirus mammalis
8256346 8256346 PRJNA631119_P_NODE_20667_length_293_cov_2.072727_g20549_i0 PRJNA631119 20667 293 2.072727 6.07309011 Phaeovirus irregularis 3431617 Viruses Viruses 54.7 0.008   NTclustered gi|1694997800|ref|NC_043254.1| 231992 g20549 i0 96.875 0.109215017064846 32 1 11 0 77 108 38740 38709 Feldmannia irregularis virus a strain FirrV-1 contig A, partial sequence blastn 32 54.7 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Algavirales Phycodnaviridae Phaeovirus Phaeovirus irregularis
8804729 8804729 PRJNA631119_P_NODE_11647_length_361_cov_3.777778_g11529_i0 PRJNA631119 11647 361 3.777778 13.63777858 Orthorubulavirus 2560195 Viruses Viruses 667 0   NTclustered gi|2449300967|gb|ON241249.1| 2560580 g11529 i0 100 79.4875346260388 361 0 100 0 1 361 402 42 Mammalian orthorubulavirus 5 isolate ATCC HTB-55 batch no 70037771, complete genome blastn 28695 667 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Paramyxoviridae Orthorubulavirus Orthorubulavirus mammalis
12082640 12082640 PRJNA631119_P_NODE_22350_length_285_cov_1.452830_g22232_i0 PRJNA631119 22350 285 1.45283 4.1405655 Vibrio phage PH669 2800823 Viruses Viruses 52.8 0.026   NTclustered gi|1952047934|gb|MW423737.1| 2800823 g22232 i0 100 0.0982456140350877 28 0 10 0 162 189 21344 21371 Vibrio phage PH669 Scaffold1 genomic sequence, sequence blastn 28 52.8 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Vibrio phage PH669
16454568 16454568 PRJNA631119_P_NODE_18373_length_306_cov_1.652361_g18255_i0 PRJNA631119 18373 306 1.652361 5.05622466 Tunavirus 187217 Viruses Viruses 566 8.239999999999998e-157   NTclustered gi|1726255596|gb|MN153797.1| 1921008 g18255 i0 100 58.5196078431373 306 0 100 0 1 306 6456 6151 Tunavirus T1 isolate 22, complete genome blastn 17907 566 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes   Drexlerviridae Tunavirus Tunavirus T1
17181189 17181189 PRJNA631119_P_NODE_21834_length_288_cov_0.986047_g21716_i0 PRJNA631119 21834 288 0.986047 2.83981536 Simplexvirus macropodidalpha1 3050317 Viruses Viruses 82.4 3.4e-11   NTclustered gi|16117368|gb|AF188480.1|AF188480 137443 g21716 i0 97.872 13.1805555555556 47 1 16 0 119 165 1591 1637 Macropodid herpesvirus 1 ICP0 (RL-2), ICP34.5 (RL-1), thymidylate synthase, and ICP4 (RS-1) genes, complete cds blastn 3796 82.4 1 Viruses   Heunggongvirae Peploviricota Herviviricetes Herpesvirales Orthoherpesviridae Simplexvirus Simplexvirus macropodidalpha1
17181233 17181233 PRJNA631119_P_NODE_30294_length_252_cov_5.413408_g30176_i0 PRJNA631119 30294 252 5.413408 13.64178816 Myoviridae sp. ct5lt7 2828094 Viruses Viruses 52.8 0.023   NTclustered gi|2054403239|tpg|BK031259.1| 2828094 g30176 i0 100 0.111111111111111 28 0 11 0 173 200 5179 5206 MAG TPA_asm: Myoviridae sp. ct5lt7, partial genome blastn 28 52.8 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Myoviridae sp. ct5lt7
17181275 17181275 PRJNA631119_P_NODE_37534_length_243_cov_0.905882_g37416_i0 PRJNA631119 37534 243 0.905882 2.20129326 Tunavirus SA30RD 3433030 Viruses Viruses 427 3.11e-115   NTclustered gi|2177608868|gb|OL960579.1| 2909745 g37416 i0 98.354 18.9423868312757 243 4 100 0 1 243 12245 12003 Escherichia phage vB_EcoS_SA30RD, complete genome blastn 4603 427 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes   Drexlerviridae Tunavirus Tunavirus SA30RD
17729685 17729685 PRJNA631119_P_NODE_1794_length_790_cov_1.820084_g1692_i0 PRJNA631119 1794 790 1.820084 14.3786636 Paramyxoviridae 11158 Viruses Viruses 1421 0   NTclustered gi|2721617856|gb|PP711545.1| 251774 g1692 i0 99.114 72.5696202531646 790 7 100 0 1 790 897 108 Porcine parainfluenza virus isolate PPIV-DX-Gansu-2020, partial genome blastn 57330 1421 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Paramyxoviridae Rubulavirus Porcine parainfluenza virus
18455205 18455205 PRJNA631119_P_NODE_12295_length_354_cov_2.679715_g12177_i0 PRJNA631119 12295 354 2.679715 9.4861911 Bacteriophage sp. 38018 Viruses Viruses 54.7 0.009   NTclustered gi|2052921599|tpg|BK018044.1| 38018 g12177 i0 100 0.0819209039548023 29 0 8 0 131 159 157137 157109 MAG TPA_asm: Bacteriophage sp. isolate ctFT739, partial genome blastn 29 54.7 1 Viruses               Bacteriophage sp.
19729824 19729824 PRJNA631119_P_NODE_25636_length_270_cov_3.903553_g25518_i0 PRJNA631119 25636 270 3.903553 10.5395931 Caudoviricetes sp. 2832643 Viruses Viruses 56.5 0.002   NTclustered gi|2058165699|tpg|BK034793.1| 2832643 g25518 i0 100 0.111111111111111 30 0 11 0 217 246 39490 39461 MAG TPA_asm: Caudoviricetes sp. isolate ct2KI6, partial genome blastn 30 56.5 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
19729848 19729848 PRJNA631119_P_NODE_29796_length_254_cov_2.016575_g29678_i0 PRJNA631119 29796 254 2.016575 5.1221005 Orthorubulavirus mammalis 3052558 Viruses Viruses 470 5.37e-128   NTclustered gi|2449300967|gb|ON241249.1| 2560580 g29678 i0 100 83.9330708661417 254 0 100 0 1 254 7187 7440 Mammalian orthorubulavirus 5 isolate ATCC HTB-55 batch no 70037771, complete genome blastn 21319 470 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Paramyxoviridae Orthorubulavirus Orthorubulavirus mammalis
19729900 19729900 PRJNA631119_P_NODE_40296_length_232_cov_3.352201_g40178_i0 PRJNA631119 40296 232 3.352201 7.77710632 Chrocurosk virus 3129322 Viruses Viruses 285 1.88e-72   NTclustered gi|2717317280|gb|PP171770.1| 3129322 g40178 i0 88.936 192.663793103448 235 20 99 6 2 232 1662 1894 MAG: Chrocurosk virus isolate CC1A_k141_129357 genomic sequence blastn 44698 285 1 Viruses   Orthornavirae Duplornaviricota Chrymotiviricetes Ghabrivirales Totiviridae   Chrocurosk virus
21005655 21005655 PRJNA631119_P_NODE_30257_length_253_cov_1.283333_g30139_i0 PRJNA631119 30257 253 1.283333 3.24683249 Squirtyvirus squirty 3432580 Viruses Viruses 468 1.92e-127   NTclustered gi|764159860|ref|NC_026588.1| 1527512 g30139 i0 100 8.56521739130435 253 0 100 0 1 253 28436 28184 Mycobacterium phage Squirty, complete genome blastn 2167 468 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes     Squirtyvirus Squirtyvirus squirty
21005730 21005730 PRJNA631119_P_NODE_7237_length_434_cov_2.299169_g7119_i0 PRJNA631119 7237 434 2.299169 9.97839346 Metapenaeus ensis majanivirus 2984279 Viruses Viruses 56.5 0.003   NTclustered gi|2327925437|dbj|LC738876.1| 2984279 g7119 i0 94.444 0.147465437788018 36 2 8 0 11 46 10916 10881 MAG: Metapenaeus ensis majanivirus Mikawa-1 DNA, complete genome blastn 64 56.5 1 Viruses       Naldaviricetes   Nimaviridae   Metapenaeus ensis majanivirus
24829571 24829571 PRJNA631119_P_NODE_41080_length_211_cov_4.057971_g40962_i0 PRJNA631119 41080 211 4.057971 8.56231881 Tiger orthorubulavirus 3028512 Viruses Viruses 390 3.459999999999999e-104   NTclustered gi|2465104481|gb|OQ236149.1| 3028512 g40962 i0 100 67.9952606635071 211 0 100 0 1 211 3320 3110 MAG: Tiger orthorubulavirus isolate PMV/GD/ZAK2044/2021 genomic sequence blastn 14347 390 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Paramyxoviridae Orthorubulavirus Tiger orthorubulavirus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;