RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "blastn", bioproject = "PRJNA631119" and tax_phylum = "Platyhelminthes"

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tax_superkingdom 1

tax_phylum 1

  • Platyhelminthes · 4 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA631119 · 4 ✖

analysis 1

  • blastn · 4 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1879328 1879328 PRJNA631119_P_NODE_13582_length_342_cov_1.133829_g13464_i0 PRJNA631119 13582 342 1.133829 3.87769518 Spirometra erinaceieuropaei 99802 Platyhelminthes Platyhelminthes 56.5 0.002   NTclustered gi|690918327|emb|LN425802.1| 99802 g13464 i0 100 3.6812865497076 30 0 9 0 226 255 321 292 Spirometra erinaceieuropaei genome assembly S_erinaceieuropaei ,scaffold SPER_contig0175935 blastn 1259 56.5 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Cestoda Diphyllobothriidea Diphyllobothriidae Spirometra Spirometra erinaceieuropaei
8256499 8256499 PRJNA631119_P_NODE_9487_length_390_cov_3.769716_g9369_i0 PRJNA631119 9487 390 3.769716 14.7018924 Spirometra erinaceieuropaei 99802 Platyhelminthes Platyhelminthes 52.8 0.037   NTclustered gi|690542892|emb|LN095795.1| 99802 g9369 i0 100 0.0717948717948718 28 0 7 0 198 225 457 484 Spirometra erinaceieuropaei genome assembly S_erinaceieuropaei ,scaffold SPER_scaffold0091032 blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Cestoda Diphyllobothriidea Diphyllobothriidae Spirometra Spirometra erinaceieuropaei
15906156 15906156 PRJNA631119_P_NODE_7013_length_439_cov_19.497268_g6895_i0 PRJNA631119 7013 439 19.497268 85.59300652 Schistosoma japonicum 6182 Platyhelminthes Platyhelminthes 516 1.25e-141   NTclustered gi|68479954|gb|DQ076149.1| 6182 g6895 i0 88.863 0.96127562642369 422 44 96 3 1 420 12 432 Schistosoma japonicum clone 1XA1 unknown mRNA blastn 422 516 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma japonicum
21005658 21005658 PRJNA631119_P_NODE_31497_length_250_cov_1.694915_g31379_i0 PRJNA631119 31497 250 1.694915 4.2372875 Schistosoma mansoni 6183 Platyhelminthes Platyhelminthes 263 9.61e-66   NTclustered gi|1369885|gb|L78441.1|SCM14332R 6183 g31379 i0 88.235 14.432 221 24 88 2 6 225 601 382 Schistosoma mansoni 14-3-3-2 mRNA, 3' end of cds blastn 3608 263 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma mansoni

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;