RNAquarium Metadata Server
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contig_metadata

9 rows where analysis = "blastn", bioproject = "PRJNA631119" and tax_phylum = "Heterolobosea"

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tax_superkingdom 1

tax_phylum 1

  • Heterolobosea · 9 ✖

tax_clade 1

bioproject 1

  • PRJNA631119 · 9 ✖

analysis 1

  • blastn · 9 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1879388 1879388 PRJNA631119_P_NODE_25362_length_272_cov_1.180905_g25244_i0 PRJNA631119 25362 272 1.180905 3.2120616 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 71.3 6.89e-8   NTclustered gi|290986447|ref|XM_002675890.1| 5762 g25244 i0 79.208 0.371323529411765 101 21 37 0 125 225 672 572 Naegleria gruberi uncharacterized protein (NAEGRDRAFT_37062), partial mRNA blastn 101 71.3 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
4430928 4430928 PRJNA631119_P_NODE_2504_length_680_cov_1.627677_g2396_i0 PRJNA631119 2504 680 1.627677 11.0682036 Naegleria fowleri 5763 Heterolobosea other_Eukaryota 448 7.3999999999999995e-121   NTclustered gi|2119427415|ref|XM_044701330.1| 5763 g2396 i0 78.739 60.0352941176471 682 135 99 9 1 677 481 1157 Naegleria fowleri uncharacterized protein (FDP41_010973), partial mRNA blastn 40824 448 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria fowleri
5706944 5706944 PRJNA631119_P_NODE_8305_length_412_cov_1.584071_g8187_i0 PRJNA631119 8305 412 1.584071 6.52637252 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 403 9.49e-108   NTclustered gi|290973034|ref|XM_002669209.1| 5762 g8187 i0 85 91.8883495145631 400 56 97 3 2 399 1635 2032 Naegleria gruberi beta-tubulin (NAEGRDRAFT_83350), mRNA blastn 37858 403 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
9531737 9531737 PRJNA631119_P_NODE_28268_length_260_cov_1.508021_g28150_i0 PRJNA631119 28268 260 1.508021 3.9208546 Naegleria fowleri 5763 Heterolobosea other_Eukaryota 91.6 5.02e-14   NTclustered gi|2124394325|ref|XM_044712972.1| 5763 g28150 i0 85.882 1.01923076923077 85 12 33 0 55 139 659 743 Naegleria fowleri uncharacterized protein (FDP41_009053), partial mRNA blastn 265 91.6 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria fowleri
12082661 12082661 PRJNA631119_P_NODE_26610_length_266_cov_2.352332_g26492_i0 PRJNA631119 26610 266 2.352332 6.25720312 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 154 6.480000000000001e-33   NTclustered gi|291001536|ref|XM_002683289.1| 5762 g26492 i0 80.693 1.42105263157895 202 35 75 2 40 239 52 251 Naegleria gruberi ras family small GTPase (RAP-1) (NAEGRDRAFT_55569), mRNA blastn 378 154 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
15905991 15905991 PRJNA631119_P_NODE_16853_length_316_cov_1.267490_g16735_i0 PRJNA631119 16853 316 1.26749 4.0052684 Psalteriomonas lanterna 31290 Heterolobosea other_Eukaryota 128 4.78e-25   NTclustered gi|2281958|emb|AJ000663.1| 31290 g16735 i0 84.733 40.4462025316456 131 16 41 4 2 130 129 1 Psalteriomonas lanterna UBI1 gene blastn 12781 128 1 Eukaryota Discoba   Heterolobosea     Psalteriomonadidae Psalteriomonas Psalteriomonas lanterna
18455318 18455318 PRJNA631119_P_NODE_29955_length_254_cov_1.348066_g29837_i0 PRJNA631119 29955 254 1.348066 3.42408764 Naegleria fowleri 5763 Heterolobosea other_Eukaryota 110 1.35e-19   NTclustered gi|2124385217|ref|XM_044707431.1| 5763 g29837 i0 85.577 5.31889763779528 104 15 41 0 148 251 413 310 Naegleria fowleri uncharacterized protein (FDP41_004058), partial mRNA blastn 1351 110 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria fowleri
19729797 19729797 PRJNA631119_P_NODE_1976_length_755_cov_3.161290_g1871_i0 PRJNA631119 1976 755 3.16129 23.8677395 Creneis carolina 1490885 Heterolobosea other_Eukaryota 568 6.08e-157   NTclustered gi|618801420|gb|KJ210088.1| 1490885 g1871 i0 81.392 97.7788079470199 704 123 93 8 52 751 1 700 Creneis carolina strain PC4AM clone 2_2 alpha tubulin gene, partial cds blastn 73823 568 1 Eukaryota Discoba   Heterolobosea     Creneidae Creneis Creneis carolina
24103767 24103767 PRJNA631119_P_NODE_27879_length_261_cov_2.425532_g27761_i0 PRJNA631119 27879 261 2.425532 6.33063852 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 187 6.2499999999999984e-43   NTclustered gi|2119429492|ref|XM_044701888.1| 5763 g27761 i0 85.326 134.114942528736 184 23 70 4 3 184 28 209 Naegleria fowleri uncharacterized protein (FDP41_011476), partial mRNA blastn 35004 187 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria fowleri

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;