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contig_metadata

5 rows where analysis = "blastn", bioproject = "PRJNA631119" and tax_phylum = "Echinodermata"

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tax_superkingdom 1

tax_phylum 1

  • Echinodermata · 5 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA631119 · 5 ✖

analysis 1

  • blastn · 5 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
603300 603300 PRJNA631119_P_NODE_8041_length_417_cov_2.654070_g7923_i0 PRJNA631119 8041 417 2.65407 11.0674719 Strongylocentrotus purpuratus 7668 Echinodermata other_Eukaryota 56.5 0.003   NTclustered gi|1752400073|ref|XM_030972871.1| 7668 g7923 i0 100 0.287769784172662 30 0 7 0 10 39 3476 3505 PREDICTED: Strongylocentrotus purpuratus serine/threonine-protein kinase WNK2 (LOC754534), transcript variant X4, mRNA blastn 120 56.5 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Camarodonta Strongylocentrotidae Strongylocentrotus Strongylocentrotus purpuratus
14632104 14632104 PRJNA631119_P_NODE_16992_length_315_cov_1.334711_g16874_i0 PRJNA631119 16992 315 1.334711 4.20433965 Diadema antillarum 105358 Echinodermata other_Eukaryota 211 4.6e-50   NTclustered gi|2919568220|ref|XM_071625947.1| 105358 g16874 i0 79.167 67.8507936507936 312 59 98 6 7 315 616 924 PREDICTED: Diadema antillarum ATP synthase subunit alpha, mitochondrial-like (LOC139714231), mRNA blastn 21373 211 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Diadematoida Diadematidae Diadema Diadema antillarum
14632154 14632154 PRJNA631119_P_NODE_26092_length_268_cov_3.097436_g25974_i0 PRJNA631119 26092 268 3.097436 8.30112848 Diadema antillarum 105358 Echinodermata other_Eukaryota 135 2.3700000000000003e-27   NTclustered gi|2919385110|ref|XM_071628776.1| 105358 g25974 i0 78.509 37.294776119403 228 33 82 12 29 248 676 457 PREDICTED: Diadema antillarum large ribosomal subunit protein uL1-like (LOC139717284), mRNA blastn 9995 135 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Diadematoida Diadematidae Diadema Diadema antillarum
19003260 19003260 PRJNA631119_P_NODE_18455_length_306_cov_0.991416_g18337_i0 PRJNA631119 18455 306 0.991416 3.03373296 Opisthokonta 33154 Echinodermata other_Eukaryota 56.5 0.002   NTclustered gi|2037984749|ref|XM_041605027.1| 7654 g18337 i0 96.97 8.65359477124183 33 1 11 0 197 229 747 715 PREDICTED: Lytechinus variegatus histone-lysine N-methyltransferase EHMT2-like (LOC121412121), mRNA blastn 2648 56.5 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Temnopleuroida Toxopneustidae Lytechinus Lytechinus variegatus
24103831 24103831 PRJNA631119_P_NODE_38099_length_242_cov_1.437870_g37981_i0 PRJNA631119 38099 242 1.43787 3.4796454 Metazoa 33208 Echinodermata other_Eukaryota 52.8 0.022   NTclustered gi|2037917966|ref|XM_041605365.1| 7654 g37981 i0 100 0.694214876033058 28 0 12 0 186 213 1285 1258 PREDICTED: Lytechinus variegatus proteolipid protein DM beta-like (LOC121412574), mRNA blastn 168 52.8 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Temnopleuroida Toxopneustidae Lytechinus Lytechinus variegatus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;