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contig_metadata

28 rows where analysis = "blastn", bioproject = "PRJNA631119" and tax_phylum = "Discosea"

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tax_superkingdom 1

tax_phylum 1

  • Discosea · 28 ✖

tax_clade 1

bioproject 1

  • PRJNA631119 · 28 ✖

analysis 1

  • blastn · 28 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
603133 603133 PRJNA631119_P_NODE_15641_length_325_cov_1.218254_g15523_i0 PRJNA631119 15641 325 1.218254 3.9593255 Vannella simplex 197532 Discosea other_Eukaryota 560 4.1e-155   NTclustered gi|25991989|gb|AF486078.1| 197532 g15523 i0 97.846 100.796923076923 325 6 100 1 1 325 97 420 Vannella simplex isolate 51 small subunit ribosomal RNA gene, partial sequence blastn 32759 560 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Vannella Vannella simplex
603159 603159 PRJNA631119_P_NODE_19801_length_298_cov_1.364444_g19683_i0 PRJNA631119 19801 298 1.364444 4.06604312 Cochliopodium spiniferum 313558 Discosea other_Eukaryota 453 6.500000000000001e-123   NTclustered gi|330902897|gb|JF298273.1| 313558 g19683 i0 94.539 97.3993288590604 293 16 98 0 6 298 866 574 Cochliopodium spiniferum clone 5102 actin gene, partial cds blastn 29025 453 1 Eukaryota Amoebozoa   Discosea   Himatismenida Cochliopodiidae Cochliopodium Cochliopodium spiniferum
1879359 1879359 PRJNA631119_P_NODE_21162_length_291_cov_1.353211_g21044_i0 PRJNA631119 21162 291 1.353211 3.93784401 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 243 1.4900000000000004e-59   NTclustered gi|1755631449|dbj|LC472809.1| 5755 g21044 i0 85.294 13.872852233677 238 31 81 3 1 236 380 615 Acanthamoeba castellanii ATCC 30011 mRNA for cysteine protease 3 blastn 4037 243 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
3154142 3154142 PRJNA631119_P_NODE_3603_length_581_cov_3.665354_g3490_i0 PRJNA631119 3603 581 3.665354 21.29570674 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 287 1.45e-72   NTclustered gi|470528557|ref|XM_004367868.1| 1257118 g3490 i0 81.461 7.49225473321859 356 60 61 6 226 578 353 1 Acanthamoeba castellanii str. Neff ribosomal protein S8e, putative (ACA1_288920), partial mRNA blastn 4353 287 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
3154190 3154190 PRJNA631119_P_NODE_7283_length_433_cov_2.697222_g7165_i0 PRJNA631119 7283 433 2.697222 11.67897126 Platyamoeba placida 3454475 Discosea other_Eukaryota 531 4.399999999999998e-146   NTclustered gi|33946348|gb|AY294153.1| 197527 g7165 i0 88.863 100.080831408776 431 48 99 0 3 433 443 873 Platyamoeba placida actin mRNA, partial cds blastn 43335 531 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Platyamoeba Platyamoeba placida
3154192 3154192 PRJNA631119_P_NODE_7443_length_429_cov_3.404494_g7325_i0 PRJNA631119 7443 429 3.404494 14.60527926 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 281 4.85e-71   NTclustered gi|470420395|ref|XM_004337241.1| 1257118 g7325 i0 79.187 81.3519813519814 418 77 96 8 17 429 1926 1514 Acanthamoeba castellanii str. Neff eukaryotic translation elongation factor 2, putative (ACA1_220140), partial mRNA blastn 34900 281 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
5706739 5706739 PRJNA631119_P_NODE_1085_length_977_cov_10.506637_g1005_i0 PRJNA631119 1085 977 10.506637 102.64984349 Platyamoeba placida 3454475 Discosea other_Eukaryota 1297 0   NTclustered gi|33946348|gb|AY294153.1| 197527 g1005 i0 90.667 96.7246673490276 975 91 99 0 3 977 77 1051 Platyamoeba placida actin mRNA, partial cds blastn 94500 1297 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Platyamoeba Platyamoeba placida
6255634 6255634 PRJNA631119_P_NODE_745_length_1119_cov_4.821224_g685_i0 PRJNA631119 745 1119 4.821224 53.94949656 Discosea 555280 Discosea other_Eukaryota 841 0   NTclustered gi|226347442|gb|FJ807261.1| 308475 g685 i0 81.659 68.5728328865058 1025 174 91 14 2 1019 185 1202 Neoparamoeba branchiphila strain AMOP1 elongation factor 1 alpha gene, partial cds blastn 76733 848 0.991745283018868 Eukaryota Amoebozoa   Discosea Flabellinia Dactylopodida Paramoebidae Paramoeba Paramoeba branchiphila
8256416 8256416 PRJNA631119_P_NODE_33667_length_248_cov_0.880000_g33549_i0 PRJNA631119 33667 248 0.88 2.1824 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 250 7.41e-62   NTclustered gi|470484553|ref|XM_004344028.1| 1257118 g33549 i0 85.477 90.0040322580645 241 33 97 2 9 248 834 595 Acanthamoeba castellanii str. Neff Sadenosyl-L-homocysteine hydrolase, putative (ACA1_054200), partial mRNA blastn 22321 250 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
8256496 8256496 PRJNA631119_P_NODE_9107_length_397_cov_1.425926_g8989_i0 PRJNA631119 9107 397 1.425926 5.66092622 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 305 2.64e-78   NTclustered gi|470421329|ref|XM_004337330.1| 1257118 g8989 i0 83.486 13.7380352644836 327 54 82 0 1 327 2025 1699 Acanthamoeba castellanii str. Neff Major Vault Protein repeatcontaining protein (ACA1_275390), partial mRNA blastn 5454 305 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
9531674 9531674 PRJNA631119_P_NODE_16388_length_319_cov_1.508130_g16270_i0 PRJNA631119 16388 319 1.50813 4.8109347 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 270 7.579999999999999e-68   NTclustered gi|470467440|ref|XM_004341747.1| 1257118 g16270 i0 82.154 100.532915360502 325 49 100 8 1 319 348 669 Acanthamoeba castellanii str. Neff guanine nucleotide-binding protein beta subunit, putative (ACA1_199990), partial mRNA blastn 32070 270 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
9531736 9531736 PRJNA631119_P_NODE_28248_length_260_cov_1.614973_g28130_i0 PRJNA631119 28248 260 1.614973 4.1989298 Vannella ebro 207334 Discosea other_Eukaryota 305 1.65e-78   NTclustered gi|33946344|gb|AY294151.1| 207334 g28130 i0 87.984 97.55 258 31 99 0 1 258 1122 865 Vannella ebro actin mRNA, complete cds blastn 25363 305 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Vannella Vannella ebro
9531766 9531766 PRJNA631119_P_NODE_33868_length_247_cov_1.764368_g33750_i0 PRJNA631119 33868 247 1.764368 4.35798896 Ripella sp. PS2 1217116 Discosea other_Eukaryota 455 1.4600000000000002e-123   NTclustered gi|399764205|gb|JQ271716.1| 1217116 g33750 i0 100 97.3846153846154 246 0 99 0 2 247 512 267 Ripella sp. PS2 18S ribosomal RNA gene, partial sequence blastn 24054 455 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Ripella Ripella sp. PS2
10807516 10807516 PRJNA631119_P_NODE_6689_length_448_cov_3.373333_g6571_i0 PRJNA631119 6689 448 3.373333 15.11253184 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 388 2.91e-103   NTclustered gi|470441552|ref|XM_004339378.1| 1257118 g6571 i0 83.063 87.7299107142857 431 69 96 4 15 443 1 429 Acanthamoeba castellanii str. Neff ribosomal protein L10, putative (ACA1_061530), partial mRNA blastn 39303 388 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
11355290 11355290 PRJNA631119_P_NODE_32189_length_249_cov_2.028409_g32071_i0 PRJNA631119 32189 249 2.028409 5.05073841 Acanthamoeba 5754 Discosea other_Eukaryota 196 9.84e-46   NTclustered gi|881634|gb|U29610.1|ACU29610 5755 g32071 i0 86.857 3.09236947791165 175 23 70 0 16 190 1027 853 Acanthaoeba castellanii actin-related protein 3 Arp3 mRNA, complete cds blastn 770 196 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
12082679 12082679 PRJNA631119_P_NODE_29350_length_256_cov_1.562842_g29232_i0 PRJNA631119 29350 256 1.562842 4.00087552 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 171 6.16e-38   NTclustered gi|470386756|ref|XM_004334184.1| 1257118 g29232 i0 79.268 49.75390625 246 49 96 2 12 256 786 542 Acanthamoeba castellanii str. Neff Rasrelated GTP-binding protein, putative (ACA1_033670), partial mRNA blastn 12737 171 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
12630843 12630843 PRJNA631119_P_NODE_11010_length_369_cov_1.956081_g10892_i0 PRJNA631119 11010 369 1.956081 7.21793889 Vannellidae 95227 Discosea other_Eukaryota 662 0   NTclustered gi|62865948|gb|AY929923.1| 325072 g10892 i0 99.183 90.3983739837398 367 3 99 0 3 369 577 211 Platyamoeba sp. strain VV/I 18S small subunit ribosomal RNA gene, partial sequence blastn 33357 662 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Platyamoeba Platyamoeba sp. strain VV/I
14632198 14632198 PRJNA631119_P_NODE_3492_length_589_cov_1.478682_g3380_i0 PRJNA631119 3492 589 1.478682 8.70943698 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 324 1.12e-83   NTclustered gi|470420395|ref|XM_004337241.1| 1257118 g3380 i0 77.963 61.4227504244482 540 104 90 12 41 571 151 684 Acanthamoeba castellanii str. Neff eukaryotic translation elongation factor 2, putative (ACA1_220140), partial mRNA blastn 36178 324 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
14632216 14632216 PRJNA631119_P_NODE_37612_length_243_cov_0.905882_g37494_i0 PRJNA631119 37612 243 0.905882 2.20129326 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 198 2.6599999999999998e-46   NTclustered gi|470501351|ref|XM_004347088.1| 1257118 g37494 i0 83.568 30.9711934156379 213 33 87 2 32 243 933 722 Acanthamoeba castellanii str. Neff RAC family serine/threonineprotein kinase, putative (ACA1_385120), partial mRNA blastn 7526 198 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
15906131 15906131 PRJNA631119_P_NODE_40113_length_234_cov_13.987578_g39995_i0 PRJNA631119 40113 234 13.987578 32.73093252 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 257 4.14e-64   NTclustered gi|470421212|ref|XM_004337322.1| 1257118 g39995 i0 88.942 80.2136752136752 208 23 89 0 1 208 208 1 Acanthamoeba castellanii str. Neff actin, putative (ACA1_328920), partial mRNA blastn 18770 257 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
15906151 15906151 PRJNA631119_P_NODE_6553_length_452_cov_4.430079_g6435_i0 PRJNA631119 6553 452 4.430079 20.02395708 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 237 1.13e-57   NTclustered gi|470529917|ref|XM_004368096.1| 1257118 g6435 i0 79.817 65.8097345132743 327 64 72 2 102 427 101 426 Acanthamoeba castellanii str. Neff ribosomal protein S17, putative (ACA1_292890), partial mRNA blastn 29746 237 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
17181272 17181272 PRJNA631119_P_NODE_37174_length_243_cov_1.800000_g37056_i0 PRJNA631119 37174 243 1.8 4.374 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 206 1.59e-48   NTclustered gi|470391451|ref|XM_004334622.1| 1257118 g37056 i0 82.083 15.6995884773663 240 43 99 0 4 243 624 385 Acanthamoeba castellanii str. Neff ATP:L-methionine S-Adenosyltransferase (ACA1_091670), partial mRNA blastn 3815 206 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
18455387 18455387 PRJNA631119_P_NODE_5895_length_472_cov_2.476190_g5777_i0 PRJNA631119 5895 472 2.47619 11.6876168 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 516 1.3499999999999998e-141   NTclustered gi|470420395|ref|XM_004337241.1| 1257118 g5777 i0 86.882 83.7033898305085 465 55 98 6 11 472 1078 1539 Acanthamoeba castellanii str. Neff eukaryotic translation elongation factor 2, putative (ACA1_220140), partial mRNA blastn 39508 516 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
19729905 19729905 PRJNA631119_P_NODE_41156_length_205_cov_6.651515_g41038_i0 PRJNA631119 41156 205 6.651515 13.63560575 Ovalopodium rosalinum 2773110 Discosea other_Eukaryota 255 1.27e-63   NTclustered gi|1912448274|gb|MW026147.1| 2773110 g41038 i0 91.005 98.0536585365854 189 17 92 0 1 189 603 791 Ovalopodium rosalinum strain ROS clone 2 actin gene, partial cds blastn 20101 255 1 Eukaryota Amoebozoa   Discosea   Himatismenida Cochliopodiidae Ovalopodium Ovalopodium rosalinum
21005543 21005543 PRJNA631119_P_NODE_12557_length_351_cov_4.025180_g12439_i0 PRJNA631119 12557 351 4.02518 14.1283818 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 237 8.530000000000001e-58   NTclustered gi|470442906|ref|XM_004339540.1| 1257118 g12439 i0 80.984 10.5897435897436 305 52 86 6 2 303 1 302 Acanthamoeba castellanii str. Neff 60S ribosomal protein, putative (ACA1_063390), partial mRNA blastn 3717 237 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
21005639 21005639 PRJNA631119_P_NODE_27597_length_262_cov_2.481481_g27479_i0 PRJNA631119 27597 262 2.481481 6.50148022 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 100 8.42e-17   NTclustered gi|470375882|ref|XM_004333185.1| 1257118 g27479 i0 90.667 6.66030534351145 75 7 29 0 2 76 157 231 Acanthamoeba castellanii str. Neff ubiquitin domain containing protein (ACA1_389410), partial mRNA blastn 1745 100 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
22829361 22829361 PRJNA631119_P_NODE_36438_length_244_cov_1.122807_g36320_i0 PRJNA631119 36438 244 1.1228070000000001 2.73964908 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 298 2.56e-76   NTclustered gi|5565|emb|V00002.1| 5755 g36320 i0 93.909 83.8688524590164 197 12 81 0 47 243 1389 1193 Acanthamoeba castelani gene encoding actin I blastn 20464 300 0.993333333333333 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
24829480 24829480 PRJNA631119_P_NODE_26940_length_265_cov_1.598958_g26822_i0 PRJNA631119 26940 265 1.598958 4.2372387 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 86.1 2.39e-12   NTclustered gi|470467005|ref|XM_004341715.1| 1257118 g26822 i0 77.707 2.0188679245283 157 23 57 10 2 152 697 547 Acanthamoeba castellanii str. Neff TolAlike protein (ACA1_199540), partial mRNA blastn 535 86.1 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;