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contig_metadata

11 rows where analysis = "blastn", bioproject = "PRJNA631119" and tax_phylum = "Chytridiomycota"

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tax_superkingdom 1

tax_phylum 1

  • Chytridiomycota · 11 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA631119 · 11 ✖

analysis 1

  • blastn · 11 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3154181 3154181 PRJNA631119_P_NODE_6463_length_455_cov_2.256545_g6345_i0 PRJNA631119 6463 455 2.256545 10.26727975 Neocallimastix frontalis 4757 Fungi Fungi 283 1.44e-71   NTclustered gi|387233100|gb|JN033860.1| 4757 g6345 i0 78.587 63.3846153846154 453 80 98 16 10 455 987 545 Neocallimastix frontalis strain PMA02 aconitate hydratase (AH1) mRNA, complete cds blastn 28840 283 1 Eukaryota Opisthokonta Fungi Chytridiomycota Neocallimastigomycetes Neocallimastigales Neocallimastigaceae Neocallimastix Neocallimastix frontalis
4430905 4430905 PRJNA631119_P_NODE_20384_length_295_cov_1.189189_g20266_i0 PRJNA631119 20384 295 1.189189 3.50810755 Synchytrium microbalum 1806994 Fungi Fungi 243 1.5100000000000001e-59   NTclustered gi|1759154564|ref|XM_031169821.1| 1806994 g20266 i0 81.57 31.6508474576271 293 54 99 0 1 293 91 383 Synchytrium microbalum uncharacterized protein (SmJEL517_g03893), partial mRNA blastn 9337 243 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Synchytriales Synchytriaceae Synchytrium Synchytrium microbalum
5706793 5706793 PRJNA631119_P_NODE_20325_length_295_cov_1.387387_g20207_i0 PRJNA631119 20325 295 1.387387 4.09279165 Polychytrium aggregatum 110093 Fungi Fungi 150 9.44e-32   NTclustered gi|2432177194|ref|XM_053112930.1| 110093 g20207 i0 80.093 2.92203389830508 216 31 71 12 1 210 756 965 Polychytrium aggregatum protein phosphatase 2A (BJ171DRAFT_539670), mRNA blastn 862 150 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Polychytriales   Polychytrium Polychytrium aggregatum
6981678 6981678 PRJNA631119_P_NODE_28646_length_258_cov_2.875676_g28528_i0 PRJNA631119 28646 258 2.875676 7.41924408 Nowakowskiella sp. 2012159 Fungi Fungi 132 2.9300000000000003e-26   NTclustered gi|1866582490|gb|MT730665.1| 2012159 g28528 i0 86.29 45.4767441860465 124 14 47 3 75 196 2235 2113 Nowakowskiella sp. isolate JEL0078 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 11733 132 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Cladochytriales Nowakowskiellaceae Nowakowskiella Nowakowskiella sp.
9531679 9531679 PRJNA631119_P_NODE_17448_length_312_cov_1.623431_g17330_i0 PRJNA631119 17448 312 1.623431 5.06510472 Polychytrium aggregatum 110093 Fungi Fungi 243 1.61e-59   NTclustered gi|2432132411|ref|XM_053109501.1| 110093 g17330 i0 84.49 22.7916666666667 245 38 79 0 30 274 1174 930 Polychytrium aggregatum ribosomal protein L3-domain-containing protein (BJ171DRAFT_489537), mRNA blastn 7111 243 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Polychytriales   Polychytrium Polychytrium aggregatum
13357340 13357340 PRJNA631119_P_NODE_11191_length_367_cov_1.472789_g11073_i0 PRJNA631119 11191 367 1.472789 5.40513563 Polychytrium aggregatum 110093 Fungi Fungi 387 8.409999999999998e-103   NTclustered gi|2432133245|ref|XM_053114647.1| 110093 g11073 i0 85.912 97.4059945504087 362 51 99 0 3 364 1199 838 Polychytrium aggregatum P-loop containing nucleoside triphosphate hydrolase protein (BJ171DRAFT_596045), mRNA blastn 35748 387 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Polychytriales   Polychytrium Polychytrium aggregatum
13357480 13357480 PRJNA631119_P_NODE_36171_length_244_cov_3.672515_g36053_i0 PRJNA631119 36171 244 3.672515 8.9609366 Polychytrium aggregatum 110093 Fungi Fungi 202 2.07e-47   NTclustered gi|2432129870|ref|XM_053107267.1| 110093 g36053 i0 81.557 28.9754098360656 244 45 100 0 1 244 653 410 Polychytrium aggregatum ribosomal protein S7 domain-containing protein (BJ171DRAFT_4084), mRNA blastn 7070 202 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Polychytriales   Polychytrium Polychytrium aggregatum
14632142 14632142 PRJNA631119_P_NODE_2472_length_684_cov_3.857610_g2364_i0 PRJNA631119 2472 684 3.85761 26.3860524 Polychytrium aggregatum 110093 Fungi Fungi 409 3.51e-109   NTclustered gi|2432156890|ref|XM_053107738.1| 110093 g2364 i0 79.688 80.8523391812866 576 109 84 8 16 587 675 104 Polychytrium aggregatum 60S ribosomal protein L2 (BJ171DRAFT_425809), partial mRNA blastn 55303 409 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Polychytriales   Polychytrium Polychytrium aggregatum
17181235 17181235 PRJNA631119_P_NODE_31134_length_251_cov_0.865169_g31016_i0 PRJNA631119 31134 251 0.865169 2.17157419 Polychytrium aggregatum 110093 Fungi Fungi 198 2.76e-46   NTclustered gi|2432149348|ref|XM_053111166.1| 110093 g31016 i0 80.876 21.2669322709163 251 48 100 0 1 251 463 213 Polychytrium aggregatum ribosomal protein S19-domain-containing protein (BJ171DRAFT_506928), mRNA blastn 5338 198 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Polychytriales   Polychytrium Polychytrium aggregatum
19729816 19729816 PRJNA631119_P_NODE_24676_length_274_cov_6.731343_g24558_i0 PRJNA631119 24676 274 6.731343 18.44387982 Polychytrium aggregatum 110093 Fungi Fungi 89.8 1.92e-13   NTclustered gi|2432158676|ref|XM_053113190.1| 110093 g24558 i0 93.333 17.7919708029197 60 4 22 0 112 171 129 70 Polychytrium aggregatum ribosomal protein S25 component of cytosolic 80S ribosome and 40S small subunit (BJ171DRAFT_559057), partial mRNA blastn 4875 89.8 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Polychytriales   Polychytrium Polychytrium aggregatum
22280248 22280248 PRJNA631119_P_NODE_10218_length_379_cov_5.584967_g10100_i0 PRJNA631119 10218 379 5.584967 21.16702493 Polychytrium aggregatum 110093 Fungi Fungi 195 5.67e-45   NTclustered gi|2432170888|ref|XM_053112523.1| 110093 g10100 i0 77.126 26.0263852242744 341 74 89 4 40 378 43 381 Polychytrium aggregatum putative 40S ribosomal protein S3 (BJ171DRAFT_522887), mRNA blastn 9864 195 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Polychytriales   Polychytrium Polychytrium aggregatum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;