RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA631119" and tax_clade = "Apusozoa"

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tax_superkingdom 1

tax_clade 1

  • Apusozoa · 2 ✖

bioproject 1

  • PRJNA631119 · 2 ✖

analysis 1

  • blastn · 2 ✖

tax_phylum 0

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
17181153 17181153 PRJNA631119_P_NODE_14354_length_335_cov_1.171756_g14236_i0 PRJNA631119 14354 335 1.171756 3.9253826 Thecamonas trahens 529818 Root_unresolved Root_unresolved 126 1.84e-24   NTclustered gi|923136870|ref|XM_013906446.1| 461836 g14236 i0 81.646 16.7402985074627 158 24 46 4 117 271 455 610 Thecamonas trahens ATCC 50062 cruzipain (AMSG_01293), mRNA blastn 5608 126 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
21005622 21005622 PRJNA631119_P_NODE_2497_length_681_cov_2.171053_g2389_i0 PRJNA631119 2497 681 2.171053 14.78487093 Thecamonas trahens 529818 Root_unresolved Root_unresolved 483 2.03e-131   NTclustered gi|923138884|ref|XM_013907453.1| 461836 g2389 i0 80.606 84.6446402349486 660 99 94 21 17 654 697 45 Thecamonas trahens ATCC 50062 elongation factor 2 (AMSG_00036), mRNA blastn 57643 483 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;